Experiment set5S566 for Enterobacter sp. TBS_079

Compare to:

M9 plate, 1:1 coculture with Microbacterium jejuense SAI_031

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -3.6 -2.5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03020 -3.4 -6.1 hypothetical protein compare
MPMX20_00108 -3.3 -17.2 hypothetical protein compare
MPMX20_02591 -3.2 -2.2 DNA-binding protein H-NS compare
MPMX20_04489 -3.0 -10.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00105 -2.9 -12.5 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04427 -2.9 -1.0 5S ribosomal RNA compare
MPMX20_04375 -2.7 -4.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_00109 -2.7 -12.6 hypothetical protein compare
MPMX20_04443 -2.7 -1.8 Sec-independent protein translocase protein TatB compare
MPMX20_00110 -2.6 -9.6 hypothetical protein compare
MPMX20_04768 -2.6 -1.8 hypothetical protein compare
MPMX20_03015 -2.6 -16.8 Phosphoglucosamine mutase compare
MPMX20_01021 -2.5 -2.5 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_04530 -2.5 -10.8 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02020 -2.5 -7.6 Mannose-6-phosphate isomerase compare
MPMX20_04133 -2.3 -5.0 Stringent starvation protein A compare
MPMX20_03019 -2.3 -7.4 hypothetical protein compare
MPMX20_03017 -2.3 -9.2 hypothetical protein compare
MPMX20_04614 -2.3 -9.4 Ribose operon repressor compare
MPMX20_02879 -2.2 -3.2 hypothetical protein compare
MPMX20_03678 -2.2 -1.1 tRNA-Met compare
MPMX20_04374 -2.2 -2.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02886 -2.2 -8.5 hypothetical protein compare
MPMX20_00831 -2.1 -3.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_03016 -2.0 -10.9 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03018 -2.0 -1.4 hypothetical protein compare
MPMX20_01333 -1.9 -2.6 Negative modulator of initiation of replication compare
MPMX20_01972 -1.9 -1.0 tRNA-Val compare
MPMX20_04730 -1.9 -4.7 hypothetical protein compare
MPMX20_03264 -1.9 -3.2 Chorismate synthase compare
MPMX20_04105 -1.9 -1.7 Lipopolysaccharide export system protein LptC compare
MPMX20_03390 -1.9 -3.1 Outer membrane protein assembly factor BamB compare
MPMX20_02696 -1.9 -5.9 Murein tetrapeptide carboxypeptidase compare
MPMX20_01665 -1.9 -1.9 hypothetical protein compare
MPMX20_04111 -1.8 -3.5 RNase adapter protein RapZ compare
MPMX20_03627 -1.8 -6.6 RNA polymerase sigma factor RpoS compare
MPMX20_04442 -1.8 -1.2 Sec-independent protein translocase protein TatC compare
MPMX20_01357 -1.8 -3.4 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01950 -1.8 -1.2 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04532 -1.7 -1.2 Met repressor compare
MPMX20_02896 -1.7 -8.0 Lysozyme RrrD compare
MPMX20_02882 -1.7 -5.6 hypothetical protein compare
MPMX20_04194 -1.7 -1.2 Peptide deformylase compare
MPMX20_02147 -1.7 -4.2 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_01334 -1.7 -5.0 Phosphoglucomutase compare
MPMX20_04467 -1.6 -3.2 Diaminopimelate epimerase compare
MPMX20_02890 -1.6 -8.9 hypothetical protein compare
MPMX20_03433 -1.6 -2.4 Ferredoxin YfhL compare
MPMX20_02885 -1.6 -5.3 hypothetical protein compare
MPMX20_03090 -1.6 -0.8 Methionine--tRNA ligase compare
MPMX20_04557 -1.6 -4.6 Sensor histidine kinase CpxA compare
MPMX20_02899 -1.6 -3.2 hypothetical protein compare
MPMX20_04440 -1.5 -1.1 Transcription antitermination protein RfaH compare
MPMX20_01370 -1.5 -1.8 Peptidoglycan-associated lipoprotein compare
MPMX20_04028 -1.5 -1.3 hypothetical protein compare
MPMX20_01722 -1.5 -1.0 putative csgAB operon transcriptional regulatory protein compare
MPMX20_03770 -1.5 -3.5 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_02887 -1.5 -2.5 hypothetical protein compare
MPMX20_01368 -1.5 -1.5 hypothetical protein compare
MPMX20_01800 -1.5 -4.8 N-acetyl-D-glucosamine kinase compare
MPMX20_04466 -1.5 -2.8 hypothetical protein compare
MPMX20_01367 -1.5 -1.4 Tol-Pal system protein TolR compare
MPMX20_01240 -1.5 -3.3 Enterobactin biosynthesis protein YbdZ compare
MPMX20_02633 -1.5 -3.4 hypothetical protein compare
MPMX20_00998 -1.5 -1.7 Sec translocon accessory complex subunit YajC compare
MPMX20_04444 -1.5 -0.9 Sec-independent protein translocase protein TatA compare
MPMX20_03021 -1.5 -2.8 hypothetical protein compare
MPMX20_02884 -1.4 -6.2 hypothetical protein compare
MPMX20_03095 -1.4 -1.2 hypothetical protein compare
MPMX20_01607 -1.4 -2.5 Outer membrane protein A compare
MPMX20_03447 -1.4 -3.3 ATP-dependent RNA helicase SrmB compare
MPMX20_00693 -1.4 -4.4 Phosphoserine phosphatase compare
MPMX20_03214 -1.4 -2.6 NADH-quinone oxidoreductase subunit F compare
MPMX20_02767 -1.4 -1.6 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00453 -1.4 -0.9 RNA-binding protein Hfq compare
MPMX20_02672 -1.4 -5.7 hypothetical protein compare
MPMX20_02862 -1.4 -8.1 hypothetical protein compare
MPMX20_02888 -1.3 -6.0 hypothetical protein compare
MPMX20_02876 -1.3 -5.2 hypothetical protein compare
MPMX20_00712 -1.3 -5.0 Threonine synthase compare
MPMX20_01020 -1.3 -0.8 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_04650 -1.3 -0.9 tRNA modification GTPase MnmE compare
MPMX20_02919 -1.3 -3.7 hypothetical protein compare
MPMX20_03047 -1.3 -1.5 dCTP deaminase compare
MPMX20_04434 -1.3 -3.9 IMPACT family member YigZ compare
MPMX20_00735 -1.3 -2.5 hypothetical protein compare
MPMX20_00630 -1.3 -2.2 hypothetical protein compare
MPMX20_02953 -1.2 -1.7 hypothetical protein compare
MPMX20_03756 -1.2 -2.3 FAD assembly factor SdhE compare
MPMX20_02904 -1.2 -5.5 hypothetical protein compare
MPMX20_04484 -1.2 -3.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03674 -1.2 -1.8 Sulfur acceptor protein CsdE compare
MPMX20_02895 -1.2 -5.6 hypothetical protein compare
MPMX20_01355 -1.2 -0.4 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01350 -1.2 -2.0 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04079 -1.2 -1.2 Protein-export membrane protein SecG compare
MPMX20_01369 -1.2 -1.8 Tol-Pal system protein TolB compare
MPMX20_02891 -1.2 -3.8 hypothetical protein compare
MPMX20_01697 -1.2 -1.9 Putative aminoacrylate peracid reductase RutC compare
MPMX20_04465 -1.2 -1.6 Tyrosine recombinase XerC compare
MPMX20_01566 -1.2 -5.6 Phosphoserine aminotransferase compare
MPMX20_01356 -1.2 -4.1 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00176 -1.2 -2.2 Cold shock protein CspA compare
MPMX20_03932 -1.2 -1.2 hypothetical protein compare
MPMX20_03212 -1.2 -2.0 NADH-quinone oxidoreductase subunit H compare
MPMX20_03376 -1.2 -2.8 HTH-type transcriptional regulator MurR compare
MPMX20_04097 -1.2 -3.4 Intermembrane phospholipid transport system binding protein MlaB compare
MPMX20_03209 -1.2 -1.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_01648 -1.2 -1.2 hypothetical protein compare
MPMX20_04377 -1.2 -4.3 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01542 -1.2 -2.0 Cold shock-like protein CspD compare
MPMX20_02903 -1.2 -2.4 hypothetical protein compare
MPMX20_04242 -1.1 -1.4 hypothetical protein compare
MPMX20_01134 -1.1 -2.6 hypothetical protein compare
MPMX20_01005 -1.1 -1.5 Transcriptional repressor NrdR compare
MPMX20_03396 -1.1 -2.6 Nucleoside diphosphate kinase compare
MPMX20_04312 -1.1 -5.1 Glucose-1-phosphate adenylyltransferase compare
MPMX20_02864 -1.1 -2.2 hypothetical protein compare
MPMX20_02894 -1.1 -2.9 hypothetical protein compare
MPMX20_03210 -1.1 -1.8 NADH-quinone oxidoreductase subunit J compare
MPMX20_02898 -1.1 -5.6 hypothetical protein compare
MPMX20_00086 -1.1 -1.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00452 -1.1 -3.5 tRNA dimethylallyltransferase compare
MPMX20_03089 -1.1 -5.3 Iron-sulfur cluster carrier protein compare
MPMX20_01975 -1.1 -7.6 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_03630 -1.1 -3.0 5'/3'-nucleotidase SurE compare
MPMX20_04685 -1.1 -4.3 hypothetical protein compare
MPMX20_01101 -1.1 -1.1 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_02892 -1.1 -4.5 hypothetical protein compare
MPMX20_04518 -1.1 -2.0 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01366 -1.1 -1.0 Tol-Pal system protein TolQ compare
MPMX20_02893 -1.1 -3.4 hypothetical protein compare
MPMX20_02869 -1.1 -7.6 hypothetical protein compare
MPMX20_01033 -1.1 -2.1 hypothetical protein compare
MPMX20_02866 -1.1 -7.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_00556 -1.1 -3.5 Ornithine carbamoyltransferase subunit F compare
MPMX20_01543 -1.1 -1.4 ATP-dependent Clp protease adapter protein ClpS compare
MPMX20_03163 -1.0 -1.1 hypothetical protein compare
MPMX20_02997 -1.0 -2.9 Exodeoxyribonuclease I compare
MPMX20_02268 -1.0 -2.7 HTH-type transcriptional regulator GltR compare
MPMX20_04687 -1.0 -4.1 hypothetical protein compare
MPMX20_04253 -1.0 -0.5 Malonate decarboxylase acyl carrier protein compare
MPMX20_01239 -1.0 -5.1 Enterochelin esterase compare
MPMX20_00393 -1.0 -3.4 hypothetical protein compare
MPMX20_01023 -1.0 -5.4 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_04098 -1.0 -3.3 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX20_01046 -1.0 -1.8 DNA base-flipping protein compare
MPMX20_00820 -1.0 -3.9 Carbonic anhydrase 2 compare
MPMX20_02931 -1.0 -4.1 hypothetical protein compare
MPMX20_01394 -1.0 -3.3 6-phosphogluconolactonase compare
MPMX20_04101 -1.0 -4.6 Intermembrane phospholipid transport system ATP-binding protein MlaF compare
MPMX20_00974 -1.0 -2.8 Phosphate starvation-inducible protein PsiF compare
MPMX20_00132 -1.0 -2.2 putative protein YibL compare
MPMX20_03354 -1.0 -3.1 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00014 -1.0 -2.6 hypothetical protein compare
MPMX20_00838 -1.0 -2.9 Iron(3+)-hydroxamate-binding protein FhuD compare
MPMX20_03217 -1.0 -1.3 NADH-quinone oxidoreductase subunit B compare
MPMX20_01616 -1.0 -0.7 Heat shock protein HspQ compare
MPMX20_02918 -1.0 -3.2 hypothetical protein compare
MPMX20_00711 -1.0 -4.5 Homoserine kinase compare
MPMX20_01958 -1.0 -0.5 Fumarase D compare
MPMX20_02921 -1.0 -4.9 hypothetical protein compare
MPMX20_04241 -1.0 -1.9 Protein SlyX compare
MPMX20_02920 -0.9 -3.0 hypothetical protein compare
MPMX20_03216 -0.9 -3.3 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01911 -0.9 -2.1 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B compare
MPMX20_03211 -0.9 -1.4 NADH-quinone oxidoreductase subunit I compare
MPMX20_01149 -0.9 -3.8 Potassium binding protein Kbp compare
MPMX20_02861 -0.9 -4.4 hypothetical protein compare
MPMX20_03666 -0.9 -4.1 Serine transporter compare
MPMX20_00899 -0.9 -0.6 Ribonuclease HI compare
MPMX20_02731 -0.9 -2.0 hypothetical protein compare
MPMX20_02883 -0.9 -2.5 hypothetical protein compare
MPMX20_02901 -0.9 -3.6 hypothetical protein compare
MPMX20_01060 -0.9 -2.5 Inner membrane protein YlaC compare
MPMX20_04626 -0.9 -0.6 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02873 -0.9 -3.3 hypothetical protein compare
MPMX20_03481 -0.9 -3.7 Inner membrane protein YpjD compare
MPMX20_00570 -0.9 -4.9 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04485 -0.9 -2.6 dTDP-fucosamine acetyltransferase compare
MPMX20_00258 -0.9 -1.8 Diacylglycerol kinase compare
MPMX20_02923 -0.9 -5.0 hypothetical protein compare
MPMX20_04104 -0.9 -2.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_02929 -0.9 -1.0 hypothetical protein compare
MPMX20_00639 -0.9 -1.5 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
MPMX20_01019 -0.9 -2.2 Protoheme IX farnesyltransferase compare
MPMX20_01806 -0.9 -2.6 Spermidine/putrescine transport system permease protein PotB compare
MPMX20_02437 -0.9 -2.1 hypothetical protein compare
MPMX20_02917 -0.9 -1.7 hypothetical protein compare
MPMX20_00092 -0.9 -3.6 Ribonuclease PH compare
MPMX20_01836 -0.9 -1.9 hypothetical protein compare
MPMX20_03773 -0.9 -2.2 HTH-type transcriptional regulator ArgP compare
MPMX20_01461 -0.9 -2.9 putative protein YbiU compare
MPMX20_03605 -0.9 -1.9 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX20_02874 -0.8 -6.2 hypothetical protein compare
MPMX20_02877 -0.8 -2.8 hypothetical protein compare
MPMX20_04140 -0.8 -2.2 Malate dehydrogenase compare
MPMX20_03154 -0.8 -3.3 Inner membrane protein YejM compare
MPMX20_03592 -0.8 -2.7 Arabinose 5-phosphate isomerase GutQ compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Microbacterium jejuense SAI_031 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Microbacterium jejuense SAI_031 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms