Experiment set5S565 for Enterobacter sp. TBS_079

Compare to:

1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -4.6 -3.2 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04768 -3.7 -5.1 hypothetical protein compare
MPMX20_02591 -3.5 -4.8 DNA-binding protein H-NS compare
MPMX20_03020 -3.5 -8.1 hypothetical protein compare
MPMX20_03019 -3.3 -10.8 hypothetical protein compare
MPMX20_04489 -3.1 -16.7 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00105 -3.1 -17.0 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01020 -3.0 -1.3 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_00108 -2.9 -18.7 hypothetical protein compare
MPMX20_00110 -2.9 -16.7 hypothetical protein compare
MPMX20_04530 -2.9 -11.8 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_01370 -2.8 -2.8 Peptidoglycan-associated lipoprotein compare
MPMX20_00109 -2.8 -18.3 hypothetical protein compare
MPMX20_01950 -2.8 -1.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01607 -2.7 -3.7 Outer membrane protein A compare
MPMX20_03509 -2.7 -1.1 hypothetical protein compare
MPMX20_03016 -2.6 -18.1 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04374 -2.6 -3.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02696 -2.6 -6.5 Murein tetrapeptide carboxypeptidase compare
MPMX20_03015 -2.5 -18.7 Phosphoglucosamine mutase compare
MPMX20_00831 -2.4 -4.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_01616 -2.4 -1.0 Heat shock protein HspQ compare
MPMX20_04375 -2.4 -6.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_03017 -2.4 -8.7 hypothetical protein compare
MPMX20_02020 -2.4 -8.4 Mannose-6-phosphate isomerase compare
MPMX20_03021 -2.3 -5.4 hypothetical protein compare
MPMX20_04442 -2.3 -3.1 Sec-independent protein translocase protein TatC compare
MPMX20_04443 -2.3 -3.0 Sec-independent protein translocase protein TatB compare
MPMX20_04377 -2.3 -9.3 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_03018 -2.2 -4.0 hypothetical protein compare
MPMX20_01098 -2.2 -2.6 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04650 -2.1 -2.1 tRNA modification GTPase MnmE compare
MPMX20_01367 -2.1 -2.9 Tol-Pal system protein TolR compare
MPMX20_02768 -2.1 -2.5 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04730 -2.1 -4.9 hypothetical protein compare
MPMX20_04444 -2.1 -1.1 Sec-independent protein translocase protein TatA compare
MPMX20_03753 -2.1 -3.2 Tyrosine recombinase XerD compare
MPMX20_02672 -2.0 -10.3 hypothetical protein compare
MPMX20_03490 -2.0 -4.0 SsrA-binding protein compare
MPMX20_03338 -2.0 -2.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00998 -2.0 -2.9 Sec translocon accessory complex subunit YajC compare
MPMX20_03354 -2.0 -5.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04731 -2.0 -6.1 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_03756 -1.9 -3.0 FAD assembly factor SdhE compare
MPMX20_03264 -1.9 -4.2 Chorismate synthase compare
MPMX20_01366 -1.9 -2.3 Tol-Pal system protein TolQ compare
MPMX20_01333 -1.9 -3.6 Negative modulator of initiation of replication compare
MPMX20_03208 -1.9 -3.8 NADH-quinone oxidoreductase subunit L compare
MPMX20_01334 -1.8 -5.4 Phosphoglucomutase compare
MPMX20_01097 -1.8 -4.6 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04614 -1.8 -8.1 Ribose operon repressor compare
MPMX20_01837 -1.8 -2.6 hypothetical protein compare
MPMX20_00226 -1.8 -4.6 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03932 -1.8 -2.7 hypothetical protein compare
MPMX20_04626 -1.8 -1.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03212 -1.8 -3.4 NADH-quinone oxidoreductase subunit H compare
MPMX20_04483 -1.7 -1.2 Lipid III flippase compare
MPMX20_03217 -1.7 -2.9 NADH-quinone oxidoreductase subunit B compare
MPMX20_03479 -1.7 -1.5 30S ribosomal protein S16 compare
MPMX20_01365 -1.7 -3.1 Acyl-CoA thioester hydrolase YbgC compare
MPMX20_03216 -1.7 -6.0 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01722 -1.7 -1.4 putative csgAB operon transcriptional regulatory protein compare
MPMX20_01022 -1.7 -7.0 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_04440 -1.7 -1.3 Transcription antitermination protein RfaH compare
MPMX20_00712 -1.7 -6.9 Threonine synthase compare
MPMX20_03571 -1.7 -1.1 tRNA-Arg compare
MPMX20_02899 -1.6 -4.4 hypothetical protein compare
MPMX20_03095 -1.6 -1.3 hypothetical protein compare
MPMX20_03627 -1.6 -4.7 RNA polymerase sigma factor RpoS compare
MPMX20_01021 -1.6 -3.0 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_04133 -1.6 -5.1 Stringent starvation protein A compare
MPMX20_00711 -1.6 -7.4 Homoserine kinase compare
MPMX20_04231 -1.6 -1.1 Bacterioferritin-associated ferredoxin compare
MPMX20_03214 -1.6 -4.2 NADH-quinone oxidoreductase subunit F compare
MPMX20_04557 -1.6 -4.2 Sensor histidine kinase CpxA compare
MPMX20_00106 -1.6 -1.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03153 -1.6 -1.3 hypothetical protein compare
MPMX20_01369 -1.6 -3.7 Tol-Pal system protein TolB compare
MPMX20_03426 -1.5 -6.7 Phosphoribosylformylglycinamidine synthase compare
MPMX20_02886 -1.5 -4.2 hypothetical protein compare
MPMX20_03440 -1.5 -1.5 Elongation factor 4 compare
MPMX20_02767 -1.5 -2.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04467 -1.5 -4.6 Diaminopimelate epimerase compare
MPMX20_02919 -1.5 -5.9 hypothetical protein compare
MPMX20_02295 -1.5 -0.8 hypothetical protein compare
MPMX20_02884 -1.5 -6.1 hypothetical protein compare
MPMX20_03022 -1.5 -1.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02890 -1.4 -5.1 hypothetical protein compare
MPMX20_04110 -1.4 -3.0 Nitrogen regulatory protein compare
MPMX20_01354 -1.4 -1.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02770 -1.4 -3.2 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_02885 -1.4 -4.9 hypothetical protein compare
MPMX20_04301 -1.4 -2.1 Fe/S biogenesis protein NfuA compare
MPMX20_03364 -1.4 -1.8 hypothetical protein compare
MPMX20_04463 -1.4 -3.5 DNA helicase II compare
MPMX20_03207 -1.4 -3.3 NADH-quinone oxidoreductase subunit M compare
MPMX20_00775 -1.4 -1.8 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_03213 -1.4 -4.7 NADH-quinone oxidoreductase subunit G compare
MPMX20_04077 -1.4 -5.6 Argininosuccinate synthase compare
MPMX20_01349 -1.4 -3.6 Citrate synthase compare
MPMX20_03211 -1.4 -2.6 NADH-quinone oxidoreductase subunit I compare
MPMX20_03210 -1.4 -2.8 NADH-quinone oxidoreductase subunit J compare
MPMX20_04312 -1.4 -6.3 Glucose-1-phosphate adenylyltransferase compare
MPMX20_04465 -1.4 -2.8 Tyrosine recombinase XerC compare
MPMX20_03215 -1.3 -1.6 NADH-quinone oxidoreductase subunit E compare
MPMX20_00086 -1.3 -2.4 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02920 -1.3 -4.4 hypothetical protein compare
MPMX20_02891 -1.3 -6.0 hypothetical protein compare
MPMX20_03409 -1.3 -1.5 Iron-binding protein IscA compare
MPMX20_03376 -1.3 -2.6 HTH-type transcriptional regulator MurR compare
MPMX20_00030 -1.3 -1.3 hypothetical protein compare
MPMX20_00747 -1.3 -2.9 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_04520 -1.3 -5.1 Argininosuccinate lyase compare
MPMX20_00132 -1.3 -2.2 putative protein YibL compare
MPMX20_02710 -1.2 -4.2 Ribonuclease D compare
MPMX20_00693 -1.2 -3.0 Phosphoserine phosphatase compare
MPMX20_03864 -1.2 -4.3 Sensor protein QseC compare
MPMX20_00225 -1.2 -4.2 Phosphoribosylamine--glycine ligase compare
MPMX20_01023 -1.2 -7.7 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_03247 -1.2 -3.1 Amidophosphoribosyltransferase compare
MPMX20_02549 -1.2 -2.6 hypothetical protein compare
MPMX20_01846 -1.2 -2.6 hypothetical protein compare
MPMX20_04505 -1.2 -5.5 HTH-type transcriptional regulator HdfR compare
MPMX20_03267 -1.2 -1.8 Phosphohistidine phosphatase SixA compare
MPMX20_00480 -1.2 -1.9 50S ribosomal protein L9 compare
MPMX20_02879 -1.2 -2.7 hypothetical protein compare
MPMX20_01566 -1.2 -6.5 Phosphoserine aminotransferase compare
MPMX20_04141 -1.2 -3.6 Arginine repressor compare
MPMX20_03390 -1.2 -3.8 Outer membrane protein assembly factor BamB compare
MPMX20_03851 -1.2 -4.9 Biopolymer transport protein ExbB compare
MPMX20_01357 -1.2 -3.1 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_02892 -1.2 -4.3 hypothetical protein compare
MPMX20_03396 -1.2 -2.9 Nucleoside diphosphate kinase compare
MPMX20_03076 -1.2 -3.9 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
MPMX20_02701 -1.1 -1.1 Fatty acid metabolism regulator protein compare
MPMX20_00710 -1.1 -5.7 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00087 -1.1 -1.5 DNA-directed RNA polymerase subunit omega compare
MPMX20_03344 -1.1 -3.8 Beta-barrel assembly-enhancing protease compare
MPMX20_00102 -1.1 -1.1 hypothetical protein compare
MPMX20_04119 -1.1 -0.8 DNA polymerase III subunit chi compare
MPMX20_04028 -1.1 -1.5 hypothetical protein compare
MPMX20_02876 -1.1 -4.2 hypothetical protein compare
MPMX20_00241 -1.1 -4.7 Glucose-6-phosphate isomerase compare
MPMX20_04466 -1.1 -2.3 hypothetical protein compare
MPMX20_02882 -1.1 -2.8 hypothetical protein compare
MPMX20_03422 -1.1 -1.1 Nitrogen regulatory protein P-II compare
MPMX20_00722 -1.1 -4.7 Na(+)/H(+) antiporter NhaA compare
MPMX20_01356 -1.1 -4.3 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04628 -1.1 -1.3 ATP synthase protein I compare
MPMX20_03334 -1.1 -0.9 hypothetical protein compare
MPMX20_02598 -1.1 -1.1 tRNA-Tyr compare
MPMX20_04687 -1.1 -4.6 hypothetical protein compare
MPMX20_04279 -1.1 -1.7 Shikimate kinase 1 compare
MPMX20_03047 -1.1 -2.5 dCTP deaminase compare
MPMX20_03248 -1.0 -2.4 Colicin V production protein compare
MPMX20_02897 -1.0 -2.0 hypothetical protein compare
MPMX20_02472 -1.0 -3.5 Phage shock protein A compare
MPMX20_02419 -1.0 -3.9 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase compare
MPMX20_01542 -1.0 -1.5 Cold shock-like protein CspD compare
MPMX20_01765 -1.0 -1.9 Ribonuclease E compare
MPMX20_00197 -1.0 -0.9 tRNA-Tyr compare
MPMX20_00530 -1.0 -4.3 Anaerobic ribonucleoside-triphosphate reductase-activating protein compare
MPMX20_01446 -1.0 -1.2 Small protein MntS compare
MPMX20_04485 -1.0 -3.7 dTDP-fucosamine acetyltransferase compare
MPMX20_01394 -1.0 -4.4 6-phosphogluconolactonase compare
MPMX20_01363 -1.0 -3.2 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_02903 -1.0 -1.8 hypothetical protein compare
MPMX20_02382 -1.0 -2.9 hypothetical protein compare
MPMX20_03773 -1.0 -2.4 HTH-type transcriptional regulator ArgP compare
MPMX20_03386 -1.0 -0.5 putative protein YfgJ compare
MPMX20_01952 -1.0 -0.6 hypothetical protein compare
MPMX20_04079 -1.0 -1.1 Protein-export membrane protein SecG compare
MPMX20_02153 -1.0 -2.9 Transcriptional repressor PaaX compare
MPMX20_04685 -1.0 -3.2 hypothetical protein compare
MPMX20_03933 -1.0 -3.6 hypothetical protein compare
MPMX20_01942 -0.9 -2.7 HTH-type transcriptional repressor BluR compare
MPMX20_04484 -0.9 -3.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_01353 -0.9 -2.8 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01484 -0.9 -2.7 HTH-type transcriptional regulator RcdA compare
MPMX20_04314 -0.9 -6.9 1,4-alpha-glucan branching enzyme GlgB compare
MPMX20_03771 -0.9 -4.8 D-3-phosphoglycerate dehydrogenase compare
MPMX20_04518 -0.9 -2.7 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01700 -0.9 -2.3 HTH-type transcriptional regulator RutR compare
MPMX20_02478 -0.9 -2.3 Putrescine export system ATP-binding protein SapF compare
MPMX20_01550 -0.9 -0.9 Thioredoxin reductase compare
MPMX20_04276 -0.9 -1.6 DNA adenine methylase compare
MPMX20_01552 -0.9 -1.4 hypothetical protein compare
MPMX20_04165 -0.9 -1.8 putative membrane protein YhdT compare
MPMX20_03602 -0.9 -2.7 Hydrogenase 3 maturation protease compare
MPMX20_02896 -0.9 -3.0 Lysozyme RrrD compare
MPMX20_00740 -0.9 -2.3 Carbamoyl-phosphate synthase large chain compare
MPMX20_01149 -0.9 -4.6 Potassium binding protein Kbp compare
MPMX20_00570 -0.9 -5.5 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04100 -0.9 -3.6 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX20_01019 -0.9 -1.7 Protoheme IX farnesyltransferase compare
MPMX20_03770 -0.9 -2.3 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_01969 -0.9 -1.2 Carbonic anhydrase 1 compare
MPMX20_01085 -0.9 -2.8 HTH-type transcriptional regulator CueR compare
MPMX20_01229 -0.9 -4.0 NAD/NADP-dependent betaine aldehyde dehydrogenase compare
MPMX20_01368 -0.9 -1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Microbacterium jejuense SAI_031 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms