Experiment set5S556 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039

Group: mixed community
Media: LB (0.1x) + Mixed culture; Promicromonospora thailandica SAI_039 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Culturing: Enterobacter_TBS_079_ML3, agar plate, Aerobic, at 30 (C), (Solid)
By: Robin on 3/19/24
Media components: 1 g/L Tryptone, 0.5 g/L Yeast Extract, 0.5 g/L Sodium Chloride (final concentrations)

Specific Phenotypes

For 2 genes in this experiment

For mixed community Mixed culture; Promicromonospora thailandica SAI_039 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Promicromonospora thailandica SAI_039 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms

SEED Subsystems

Subsystem #Specific
Methionine Biosynthesis 1
Siderophore Enterobactin 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
S-adenosyl-L-methionine salvage II 3 2 1
S-adenosyl-L-methionine salvage I 4 4 1
L-methionine biosynthesis III 4 2 1
L-methionine biosynthesis I 5 5 1
seleno-amino acid biosynthesis (plants) 5 3 1
L-methionine biosynthesis II 6 5 1
superpathway of L-homoserine and L-methionine biosynthesis 8 8 1
superpathway of L-methionine biosynthesis (transsulfuration) 9 9 1
superpathway of S-adenosyl-L-methionine biosynthesis 9 9 1
superpathway of L-methionine biosynthesis (by sulfhydrylation) 12 10 1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis II 15 13 1
superpathway of L-lysine, L-threonine and L-methionine biosynthesis I 18 18 1
superpathway of seleno-compound metabolism 19 6 1
aspartate superpathway 25 24 1