Experiment set5S555 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039

200 most important genes:

  gene name fitness t score description  
MPMX20_00105 -3.9 -15.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04489 -3.9 -12.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04768 -3.8 -2.7 hypothetical protein compare
MPMX20_00831 -3.8 -4.5 RNA polymerase-binding transcription factor DksA compare
MPMX20_03264 -3.5 -4.7 Chorismate synthase compare
MPMX20_00110 -3.4 -13.8 hypothetical protein compare
MPMX20_03435 -3.3 -2.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_03019 -3.2 -12.8 hypothetical protein compare
MPMX20_03018 -3.2 -2.2 hypothetical protein compare
MPMX20_04530 -3.2 -12.6 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02591 -3.2 -6.1 DNA-binding protein H-NS compare
MPMX20_02755 -3.1 -4.2 KHG/KDPG aldolase compare
MPMX20_01567 -3.1 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03016 -3.0 -19.8 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01334 -3.0 -8.2 Phosphoglucomutase compare
MPMX20_04444 -3.0 -1.3 Sec-independent protein translocase protein TatA compare
MPMX20_00109 -3.0 -17.6 hypothetical protein compare
MPMX20_00929 -3.0 -1.8 tRNA-Thr compare
MPMX20_02879 -2.9 -4.5 hypothetical protein compare
MPMX20_03354 -2.9 -6.0 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03338 -2.9 -2.0 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03015 -2.9 -19.5 Phosphoglucosamine mutase compare
MPMX20_01097 -2.8 -4.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04442 -2.7 -1.9 Sec-independent protein translocase protein TatC compare
MPMX20_00108 -2.7 -14.1 hypothetical protein compare
MPMX20_03153 -2.7 -1.3 hypothetical protein compare
MPMX20_03005 -2.7 -5.1 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_01098 -2.7 -1.8 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04443 -2.7 -2.3 Sec-independent protein translocase protein TatB compare
MPMX20_02344 -2.6 -2.0 hypothetical protein compare
MPMX20_04162 -2.6 -1.8 3-dehydroquinate dehydratase compare
MPMX20_03017 -2.6 -11.2 hypothetical protein compare
MPMX20_02020 -2.6 -9.8 Mannose-6-phosphate isomerase compare
MPMX20_01566 -2.5 -8.9 Phosphoserine aminotransferase compare
MPMX20_04440 -2.5 -1.5 Transcription antitermination protein RfaH compare
MPMX20_00226 -2.5 -3.7 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04639 -2.4 -1.3 Phosphate-binding protein PstS compare
MPMX20_03771 -2.4 -8.9 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03850 -2.4 -3.6 Biopolymer transport protein ExbD compare
MPMX20_02514 -2.3 -4.6 Tryptophan synthase alpha chain compare
MPMX20_03003 -2.3 -7.5 Histidinol-phosphate aminotransferase compare
MPMX20_00225 -2.3 -4.4 Phosphoribosylamine--glycine ligase compare
MPMX20_03426 -2.3 -6.5 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03020 -2.3 -5.7 hypothetical protein compare
MPMX20_04194 -2.3 -1.4 Peptide deformylase compare
MPMX20_02546 -2.2 -1.7 hypothetical protein compare
MPMX20_02881 -2.2 -2.7 hypothetical protein compare
MPMX20_01950 -2.2 -2.6 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00928 -2.2 -8.4 Gamma-glutamyl phosphate reductase compare
MPMX20_03002 -2.2 -7.2 Histidinol dehydrogenase compare
MPMX20_01369 -2.2 -3.9 Tol-Pal system protein TolB compare
MPMX20_01952 -2.1 -0.9 hypothetical protein compare
MPMX20_03021 -2.1 -6.3 hypothetical protein compare
MPMX20_04497 -2.1 -5.8 HTH-type transcriptional regulator GltC compare
MPMX20_03004 -2.1 -7.3 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00712 -2.1 -8.4 Threonine synthase compare
MPMX20_04496 -2.1 -4.8 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03163 -2.0 -1.7 hypothetical protein compare
MPMX20_04499 -2.0 -9.6 Dihydroxy-acid dehydratase compare
MPMX20_03636 -2.0 -4.1 Adenylyl-sulfate kinase compare
MPMX20_01367 -2.0 -3.3 Tol-Pal system protein TolR compare
MPMX20_00899 -2.0 -1.4 Ribonuclease HI compare
MPMX20_03255 -2.0 -6.6 Erythronate-4-phosphate dehydrogenase compare
MPMX20_04137 -2.0 -3.5 Inner membrane protein YhcB compare
MPMX20_03007 -1.9 -5.4 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_04452 -1.9 -6.9 HTH-type transcriptional regulator MetR compare
MPMX20_04189 -1.9 -2.3 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03643 -1.9 -6.9 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_02512 -1.9 -7.3 Tryptophan biosynthesis protein TrpCF compare
MPMX20_01368 -1.9 -2.9 hypothetical protein compare
MPMX20_03390 -1.9 -4.9 Outer membrane protein assembly factor BamB compare
MPMX20_03641 -1.9 -5.3 Phosphoadenosine phosphosulfate reductase compare
MPMX20_00556 -1.9 -6.2 Ornithine carbamoyltransferase subunit F compare
MPMX20_04077 -1.8 -6.3 Argininosuccinate synthase compare
MPMX20_00766 -1.8 -5.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04498 -1.8 -7.1 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_00711 -1.8 -7.9 Homoserine kinase compare
MPMX20_02513 -1.8 -8.2 Tryptophan synthase beta chain compare
MPMX20_03006 -1.8 -5.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_02770 -1.8 -2.8 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_01333 -1.8 -3.6 Negative modulator of initiation of replication compare
MPMX20_00197 -1.8 -1.3 tRNA-Tyr compare
MPMX20_04687 -1.8 -6.9 hypothetical protein compare
MPMX20_00710 -1.8 -9.2 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00693 -1.7 -4.8 Phosphoserine phosphatase compare
MPMX20_00768 -1.7 -7.0 3-isopropylmalate dehydrogenase compare
MPMX20_04483 -1.7 -1.2 Lipid III flippase compare
MPMX20_04626 -1.7 -1.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00825 -1.7 -0.9 Aspartate 1-decarboxylase compare
MPMX20_02511 -1.7 -6.8 Bifunctional protein TrpGD compare
MPMX20_03468 -1.7 -5.3 T-protein compare
MPMX20_04559 -1.7 -2.5 Superoxide dismutase [Mn] compare
MPMX20_04524 -1.7 -9.2 Phosphoenolpyruvate carboxylase compare
MPMX20_03008 -1.7 -4.5 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_00976 -1.7 -2.9 Pyrroline-5-carboxylate reductase compare
MPMX20_03022 -1.7 -1.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02882 -1.6 -7.1 hypothetical protein compare
MPMX20_04374 -1.6 -2.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02919 -1.6 -6.4 hypothetical protein compare
MPMX20_03681 -1.6 -7.5 Amino-acid acetyltransferase compare
MPMX20_04597 -1.6 -4.4 DNA-binding transcriptional regulator NtrC compare
MPMX20_04110 -1.6 -2.8 Nitrogen regulatory protein compare
MPMX20_04520 -1.6 -4.8 Argininosuccinate lyase compare
MPMX20_02918 -1.6 -3.9 hypothetical protein compare
MPMX20_04668 -1.6 -1.7 hypothetical protein compare
MPMX20_03355 -1.6 -5.5 Phosphoribosylglycinamide formyltransferase compare
MPMX20_00927 -1.6 -5.6 Glutamate 5-kinase compare
MPMX20_03642 -1.5 -6.6 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_00106 -1.5 -1.8 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03247 -1.5 -3.8 Amidophosphoribosyltransferase compare
MPMX20_02885 -1.5 -6.8 hypothetical protein compare
MPMX20_04529 -1.5 -4.6 5,10-methylenetetrahydrofolate reductase compare
MPMX20_04523 -1.5 -4.9 Acetylornithine deacetylase compare
MPMX20_02510 -1.5 -7.7 Anthranilate synthase component 1 compare
MPMX20_04133 -1.5 -3.5 Stringent starvation protein A compare
MPMX20_04650 -1.5 -2.7 tRNA modification GTPase MnmE compare
MPMX20_02216 -1.5 -2.5 hypothetical protein compare
MPMX20_04531 -1.5 -5.6 Cystathionine gamma-synthase compare
MPMX20_03756 -1.5 -2.8 FAD assembly factor SdhE compare
MPMX20_03334 -1.5 -1.1 hypothetical protein compare
MPMX20_04463 -1.5 -3.5 DNA helicase II compare
MPMX20_01691 -1.5 -1.3 hypothetical protein compare
MPMX20_01550 -1.5 -1.0 Thioredoxin reductase compare
MPMX20_02549 -1.5 -2.7 hypothetical protein compare
MPMX20_01765 -1.5 -3.5 Ribonuclease E compare
MPMX20_02767 -1.5 -2.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03851 -1.5 -4.7 Biopolymer transport protein ExbB compare
MPMX20_00570 -1.4 -8.5 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04127 -1.4 -7.3 Glutamate synthase [NADPH] small chain compare
MPMX20_03154 -1.4 -3.2 Inner membrane protein YejM compare
MPMX20_04730 -1.4 -2.6 hypothetical protein compare
MPMX20_00544 -1.4 -1.7 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02896 -1.4 -7.0 Lysozyme RrrD compare
MPMX20_04377 -1.4 -6.0 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_00102 -1.4 -1.0 hypothetical protein compare
MPMX20_02891 -1.4 -6.6 hypothetical protein compare
MPMX20_03469 -1.4 -6.4 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_00107 -1.4 -4.4 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_00748 -1.4 -4.1 4-hydroxythreonine-4-phosphate dehydrogenase compare
MPMX20_03212 -1.4 -3.4 NADH-quinone oxidoreductase subunit H compare
MPMX20_02593 -1.4 -7.4 Regulator of RpoS compare
MPMX20_00740 -1.4 -2.5 Carbamoyl-phosphate synthase large chain compare
MPMX20_03674 -1.4 -2.3 Sulfur acceptor protein CsdE compare
MPMX20_00241 -1.4 -5.2 Glucose-6-phosphate isomerase compare
MPMX20_02890 -1.3 -7.5 hypothetical protein compare
MPMX20_01552 -1.3 -1.3 hypothetical protein compare
MPMX20_01813 -1.3 -6.0 hypothetical protein compare
MPMX20_02775 -1.3 -4.2 Carboxy-S-adenosyl-L-methionine synthase compare
MPMX20_01349 -1.3 -3.0 Citrate synthase compare
MPMX20_02893 -1.3 -4.2 hypothetical protein compare
MPMX20_02887 -1.3 -3.5 hypothetical protein compare
MPMX20_02635 -1.3 -1.3 Release factor glutamine methyltransferase compare
MPMX20_03629 -1.3 -2.5 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03852 -1.3 -5.9 Cystathionine beta-lyase MetC compare
MPMX20_02886 -1.3 -4.0 hypothetical protein compare
MPMX20_03001 -1.3 -5.7 ATP phosphoribosyltransferase compare
MPMX20_03466 -1.3 -5.2 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_01837 -1.3 -1.6 hypothetical protein compare
MPMX20_00441 -1.3 -0.7 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_00728 -1.3 -0.9 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_00630 -1.3 -2.0 hypothetical protein compare
MPMX20_03705 -1.3 -4.2 Diaminopimelate decarboxylase compare
MPMX20_04126 -1.2 -7.9 Glutamate synthase [NADPH] large chain compare
MPMX20_00739 -1.2 -1.5 Carbamoyl-phosphate synthase small chain compare
MPMX20_04731 -1.2 -4.3 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02672 -1.2 -8.7 hypothetical protein compare
MPMX20_04467 -1.2 -3.6 Diaminopimelate epimerase compare
MPMX20_00998 -1.2 -2.4 Sec translocon accessory complex subunit YajC compare
MPMX20_00453 -1.2 -1.5 RNA-binding protein Hfq compare
MPMX20_04518 -1.2 -3.3 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_04297 -1.2 -2.3 putative [Fe-S]-dependent transcriptional repressor FeoC compare
MPMX20_00720 -1.2 -0.6 Chaperone protein DnaK compare
MPMX20_04522 -1.2 -4.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_02920 -1.2 -4.9 hypothetical protein compare
MPMX20_04532 -1.2 -1.3 Met repressor compare
MPMX20_02010 -1.2 -4.3 Ion-translocating oxidoreductase complex subunit B compare
MPMX20_01370 -1.2 -1.9 Peptidoglycan-associated lipoprotein compare
MPMX20_02701 -1.2 -1.4 Fatty acid metabolism regulator protein compare
MPMX20_03447 -1.2 -4.3 ATP-dependent RNA helicase SrmB compare
MPMX20_02295 -1.2 -1.0 hypothetical protein compare
MPMX20_04504 -1.2 -2.0 hypothetical protein compare
MPMX20_00492 -1.2 -4.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_02696 -1.2 -3.2 Murein tetrapeptide carboxypeptidase compare
MPMX20_01607 -1.2 -2.3 Outer membrane protein A compare
MPMX20_02768 -1.2 -1.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01112 -1.2 -5.8 putative fimbrial-like protein SfmH compare
MPMX20_02892 -1.2 -6.2 hypothetical protein compare
MPMX20_02903 -1.1 -2.0 hypothetical protein compare
MPMX20_04585 -1.1 -3.1 HTH-type transcriptional repressor CsqR compare
MPMX20_02477 -1.1 -1.7 Peptide transport system ATP-binding protein SapD compare
MPMX20_03638 -1.1 -3.6 Sulfate adenylyltransferase subunit 2 compare
MPMX20_02866 -1.1 -7.6 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_01775 -1.1 -2.9 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04119 -1.1 -0.8 DNA polymerase III subunit chi compare
MPMX20_02589 -1.1 -7.2 Aldehyde-alcohol dehydrogenase compare
MPMX20_04465 -1.1 -2.7 Tyrosine recombinase XerC compare
MPMX20_03882 -1.1 -4.1 Outer membrane protein TolC compare
MPMX20_02776 -1.1 -4.3 tRNA U34 carboxymethyltransferase compare
MPMX20_04596 -1.1 -5.3 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_03310 -1.1 -1.3 Phosphoenolpyruvate-protein phosphotransferase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Promicromonospora thailandica SAI_039 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms