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    • Experiment set5S55 for Phocaeicola vulgatus CL09T03C04

    Compare to:

    diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4

    Genes with specific phenotypes:

      gene name fitness t score description  
    HMPREF1058_RS11875 -4.6 -14.1 hypothetical protein compare
    HMPREF1058_RS16425 -1.9 -12.8 TonB-dependent receptor compare
    HMPREF1058_RS07825 -1.8 -9.9 DUF4221 family protein compare
    HMPREF1058_RS08695 -1.7 -12.5 RagB/SusD family nutrient uptake outer membrane protein compare
    HMPREF1058_RS12230 -1.7 -8.3 glycoside hydrolase compare
    HMPREF1058_RS16640 -1.7 -8.7 hypothetical protein compare
    HMPREF1058_RS07785 -1.6 -7.0 signal peptidase I compare
    HMPREF1058_RS09010 -1.5 -10.3 GH92 family glycosyl hydrolase compare
    HMPREF1058_RS08700 -1.5 -9.6 SusC/RagA family TonB-linked outer membrane protein compare
    HMPREF1058_RS02945 -1.2 -5.1 sulfate adenylyltransferase subunit CysD compare
    HMPREF1058_RS10760 -1.1 -6.6 sulfatase compare
    HMPREF1058_RS07815 -1.1 -5.5 6-bladed beta-propeller compare
    HMPREF1058_RS11260 -1.0 -5.4 arylsulfatase compare
    HMPREF1058_RS13030 +1.3 9.1 TonB-dependent receptor compare


    Specific phenotypes for mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm across organisms