Experiment set5S548 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

200 most important genes:

  gene name fitness t score description  
MPMX20_01566 -4.1 -7.9 Phosphoserine aminotransferase compare
MPMX20_03678 -4.1 -1.4 tRNA-Met compare
MPMX20_03264 -3.9 -2.7 Chorismate synthase compare
MPMX20_03007 -3.9 -3.8 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_00831 -3.9 -3.8 RNA polymerase-binding transcription factor DksA compare
MPMX20_03001 -3.7 -4.5 ATP phosphoribosyltransferase compare
MPMX20_03095 -3.7 -2.1 hypothetical protein compare
MPMX20_02591 -3.7 -4.4 DNA-binding protein H-NS compare
MPMX20_00693 -3.7 -3.6 Phosphoserine phosphatase compare
MPMX20_00711 -3.6 -5.6 Homoserine kinase compare
MPMX20_00768 -3.6 -8.1 3-isopropylmalate dehydrogenase compare
MPMX20_01370 -3.6 -2.5 Peptidoglycan-associated lipoprotein compare
MPMX20_03163 -3.5 -1.6 hypothetical protein compare
MPMX20_04530 -3.5 -14.3 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03285 -3.5 -1.2 hypothetical protein compare
MPMX20_03681 -3.5 -7.1 Amino-acid acetyltransferase compare
MPMX20_03771 -3.3 -7.4 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03003 -3.3 -6.4 Histidinol-phosphate aminotransferase compare
MPMX20_00230 -3.3 -5.1 Homoserine O-succinyltransferase compare
MPMX20_03004 -3.3 -5.9 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_04499 -3.3 -6.6 Dihydroxy-acid dehydratase compare
MPMX20_04427 -3.2 -1.1 5S ribosomal RNA compare
MPMX20_04768 -3.2 -4.4 hypothetical protein compare
MPMX20_03986 -3.2 -3.5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00105 -3.2 -14.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03468 -3.2 -3.1 T-protein compare
MPMX20_02513 -3.2 -8.4 Tryptophan synthase beta chain compare
MPMX20_02511 -3.1 -8.1 Bifunctional protein TrpGD compare
MPMX20_00712 -3.1 -7.0 Threonine synthase compare
MPMX20_00766 -3.1 -4.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_00927 -3.1 -9.8 Glutamate 5-kinase compare
MPMX20_03002 -3.1 -8.0 Histidinol dehydrogenase compare
MPMX20_04497 -3.1 -4.7 HTH-type transcriptional regulator GltC compare
MPMX20_03435 -3.0 -2.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_02020 -3.0 -12.2 Mannose-6-phosphate isomerase compare
MPMX20_04489 -3.0 -14.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02510 -3.0 -10.2 Anthranilate synthase component 1 compare
MPMX20_02514 -3.0 -4.1 Tryptophan synthase alpha chain compare
MPMX20_03008 -3.0 -5.4 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01020 -2.9 -1.4 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_03017 -2.9 -12.5 hypothetical protein compare
MPMX20_04521 -2.9 -2.0 Acetylglutamate kinase compare
MPMX20_01073 -2.9 -1.8 Nucleoid-associated protein YbaB compare
MPMX20_03019 -2.9 -11.3 hypothetical protein compare
MPMX20_03247 -2.9 -2.0 Amidophosphoribosyltransferase compare
MPMX20_03005 -2.9 -4.4 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_03466 -2.9 -7.6 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_00108 -2.8 -19.0 hypothetical protein compare
MPMX20_04444 -2.8 -1.3 Sec-independent protein translocase protein TatA compare
MPMX20_04374 -2.8 -3.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_01097 -2.8 -3.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02770 -2.8 -3.3 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04077 -2.8 -4.7 Argininosuccinate synthase compare
MPMX20_00110 -2.8 -13.9 hypothetical protein compare
MPMX20_02768 -2.8 -1.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04522 -2.8 -2.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_04531 -2.8 -5.3 Cystathionine gamma-synthase compare
MPMX20_01334 -2.8 -7.5 Phosphoglucomutase compare
MPMX20_01950 -2.8 -1.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_02755 -2.7 -4.2 KHG/KDPG aldolase compare
MPMX20_00710 -2.7 -9.4 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_04344 -2.7 -1.5 hypothetical protein compare
MPMX20_04523 -2.7 -4.4 Acetylornithine deacetylase compare
MPMX20_01353 -2.7 -3.6 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03248 -2.6 -3.6 Colicin V production protein compare
MPMX20_00109 -2.6 -15.3 hypothetical protein compare
MPMX20_03354 -2.6 -5.3 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03509 -2.6 -1.2 hypothetical protein compare
MPMX20_00928 -2.6 -7.3 Gamma-glutamyl phosphate reductase compare
MPMX20_03850 -2.6 -3.0 Biopolymer transport protein ExbD compare
MPMX20_03641 -2.6 -4.6 Phosphoadenosine phosphosulfate reductase compare
MPMX20_03851 -2.6 -6.6 Biopolymer transport protein ExbB compare
MPMX20_01607 -2.5 -3.8 Outer membrane protein A compare
MPMX20_01567 -2.5 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04498 -2.5 -6.5 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_02767 -2.5 -2.4 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03020 -2.5 -8.1 hypothetical protein compare
MPMX20_03469 -2.5 -7.5 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_00086 -2.5 -3.8 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00226 -2.5 -1.7 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00556 -2.4 -5.2 Ornithine carbamoyltransferase subunit F compare
MPMX20_03015 -2.4 -17.7 Phosphoglucosamine mutase compare
MPMX20_02512 -2.4 -7.1 Tryptophan biosynthesis protein TrpCF compare
MPMX20_04442 -2.4 -1.7 Sec-independent protein translocase protein TatC compare
MPMX20_00767 -2.4 -5.8 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_03016 -2.4 -16.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03338 -2.4 -1.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03426 -2.4 -3.7 Phosphoribosylformylglycinamidine synthase compare
MPMX20_04452 -2.4 -6.3 HTH-type transcriptional regulator MetR compare
MPMX20_00225 -2.4 -2.8 Phosphoribosylamine--glycine ligase compare
MPMX20_04496 -2.3 -4.5 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03021 -2.3 -5.1 hypothetical protein compare
MPMX20_00769 -2.3 -10.6 2-isopropylmalate synthase compare
MPMX20_03255 -2.3 -6.2 Erythronate-4-phosphate dehydrogenase compare
MPMX20_03018 -2.3 -4.1 hypothetical protein compare
MPMX20_04552 -2.3 -1.6 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_03852 -2.3 -8.3 Cystathionine beta-lyase MetC compare
MPMX20_04262 -2.2 -4.9 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_04126 -2.2 -11.6 Glutamate synthase [NADPH] large chain compare
MPMX20_01098 -2.2 -2.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04171 -2.1 -2.3 hypothetical protein compare
MPMX20_03812 -2.1 -5.9 dITP/XTP pyrophosphatase compare
MPMX20_01333 -2.1 -4.2 Negative modulator of initiation of replication compare
MPMX20_01765 -2.1 -3.1 Ribonuclease E compare
MPMX20_02576 -2.0 -1.4 Protein TonB compare
MPMX20_03006 -2.0 -4.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_04520 -2.0 -2.8 Argininosuccinate lyase compare
MPMX20_01542 -2.0 -2.5 Cold shock-like protein CspD compare
MPMX20_03267 -2.0 -2.4 Phosphohistidine phosphatase SixA compare
MPMX20_03705 -2.0 -5.9 Diaminopimelate decarboxylase compare
MPMX20_01952 -2.0 -0.9 hypothetical protein compare
MPMX20_04110 -2.0 -1.9 Nitrogen regulatory protein compare
MPMX20_03047 -2.0 -2.7 dCTP deaminase compare
MPMX20_01586 -2.0 -5.9 Aspartate aminotransferase compare
MPMX20_04127 -2.0 -8.6 Glutamate synthase [NADPH] small chain compare
MPMX20_04650 -1.9 -1.3 tRNA modification GTPase MnmE compare
MPMX20_02596 -1.9 -7.7 Formyltetrahydrofolate deformylase compare
MPMX20_02593 -1.9 -7.3 Regulator of RpoS compare
MPMX20_01785 -1.9 -2.3 hypothetical protein compare
MPMX20_01367 -1.9 -2.9 Tol-Pal system protein TolR compare
MPMX20_03756 -1.9 -2.9 FAD assembly factor SdhE compare
MPMX20_01355 -1.9 -0.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03753 -1.9 -2.9 Tyrosine recombinase XerD compare
MPMX20_01942 -1.9 -2.8 HTH-type transcriptional repressor BluR compare
MPMX20_04099 -1.9 -4.1 Intermembrane phospholipid transport system binding protein MlaD compare
MPMX20_03490 -1.9 -3.7 SsrA-binding protein compare
MPMX20_04279 -1.9 -1.8 Shikimate kinase 1 compare
MPMX20_04467 -1.9 -4.4 Diaminopimelate epimerase compare
MPMX20_04137 -1.8 -3.3 Inner membrane protein YhcB compare
MPMX20_03636 -1.8 -3.9 Adenylyl-sulfate kinase compare
MPMX20_00976 -1.8 -2.8 Pyrroline-5-carboxylate reductase compare
MPMX20_00800 -1.8 -5.6 Nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
MPMX20_04133 -1.8 -3.9 Stringent starvation protein A compare
MPMX20_03642 -1.8 -6.4 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_04524 -1.8 -8.4 Phosphoenolpyruvate carboxylase compare
MPMX20_04242 -1.8 -1.8 hypothetical protein compare
MPMX20_01342 -1.8 -2.6 hypothetical protein compare
MPMX20_04141 -1.8 -3.6 Arginine repressor compare
MPMX20_00441 -1.8 -0.8 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04529 -1.8 -4.1 5,10-methylenetetrahydrofolate reductase compare
MPMX20_01551 -1.8 -2.9 Leucine-responsive regulatory protein compare
MPMX20_01368 -1.8 -2.6 hypothetical protein compare
MPMX20_04731 -1.8 -4.6 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_01349 -1.8 -3.3 Citrate synthase compare
MPMX20_03409 -1.7 -1.2 Iron-binding protein IscA compare
MPMX20_03643 -1.7 -6.0 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_00241 -1.7 -4.6 Glucose-6-phosphate isomerase compare
MPMX20_01204 -1.7 -9.3 hypothetical protein compare
MPMX20_03290 -1.7 -1.1 tRNA-Ala compare
MPMX20_00748 -1.7 -4.3 4-hydroxythreonine-4-phosphate dehydrogenase compare
MPMX20_04162 -1.7 -2.0 3-dehydroquinate dehydratase compare
MPMX20_03445 -1.7 -6.3 L-aspartate oxidase compare
MPMX20_04443 -1.7 -1.6 Sec-independent protein translocase protein TatB compare
MPMX20_03206 -1.7 -4.1 NADH-quinone oxidoreductase subunit N compare
MPMX20_04493 -1.6 -5.5 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
MPMX20_03706 -1.6 -4.8 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_00998 -1.6 -2.0 Sec translocon accessory complex subunit YajC compare
MPMX20_00214 -1.6 -2.9 Sulfur carrier protein ThiS compare
MPMX20_01369 -1.6 -3.7 Tol-Pal system protein TolB compare
MPMX20_02801 -1.6 -6.1 Flagellar transcriptional regulator FlhC compare
MPMX20_00022 -1.6 -2.5 Inner membrane protein YidG compare
MPMX20_00453 -1.6 -1.3 RNA-binding protein Hfq compare
MPMX20_04597 -1.6 -3.9 DNA-binding transcriptional regulator NtrC compare
MPMX20_01363 -1.6 -3.8 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_04761 -1.5 -3.9 IS3 family transposase IS1222 compare
MPMX20_04140 -1.5 -4.0 Malate dehydrogenase compare
MPMX20_03154 -1.5 -5.2 Inner membrane protein YejM compare
MPMX20_01352 -1.5 -5.0 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02496 -1.5 -1.0 Lipopolysaccharide assembly protein A compare
MPMX20_03094 -1.5 -2.1 HTH-type transcriptional regulator MlrA compare
MPMX20_03515 -1.5 -2.6 hypothetical protein compare
MPMX20_00087 -1.5 -1.4 DNA-directed RNA polymerase subunit omega compare
MPMX20_04730 -1.5 -4.1 hypothetical protein compare
MPMX20_04466 -1.5 -3.4 hypothetical protein compare
MPMX20_01381 -1.5 -2.0 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive compare
MPMX20_04451 -1.5 -7.5 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
MPMX20_01005 -1.5 -1.4 Transcriptional repressor NrdR compare
MPMX20_02997 -1.5 -5.2 Exodeoxyribonuclease I compare
MPMX20_02635 -1.5 -1.0 Release factor glutamine methyltransferase compare
MPMX20_01919 -1.5 -1.7 putative protein YdiE compare
MPMX20_01351 -1.4 -2.5 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_01350 -1.4 -2.5 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_00107 -1.4 -4.3 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_04375 -1.4 -4.7 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_03022 -1.4 -1.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04483 -1.4 -1.0 Lipid III flippase compare
MPMX20_04132 -1.4 -3.1 Stringent starvation protein B compare
MPMX20_02589 -1.4 -8.3 Aldehyde-alcohol dehydrogenase compare
MPMX20_03278 -1.4 -1.9 hypothetical protein compare
MPMX20_04012 -1.4 -2.5 Inner membrane protein YhaH compare
MPMX20_04626 -1.4 -1.4 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03479 -1.4 -1.3 30S ribosomal protein S16 compare
MPMX20_03902 -1.4 -1.1 Urease accessory protein UreE compare
MPMX20_02646 -1.4 -1.1 hypothetical protein compare
MPMX20_01377 -1.4 -3.3 Quinolinate synthase A compare
MPMX20_04189 -1.4 -2.1 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_04501 -1.4 -2.8 Acetolactate synthase isozyme 2 small subunit compare
MPMX20_00740 -1.4 -1.3 Carbamoyl-phosphate synthase large chain compare
MPMX20_02785 -1.4 -4.2 Protein phosphatase CheZ compare
MPMX20_03805 -1.3 -6.2 Glutathione synthetase compare


Specific Phenotypes

For 23 genes in this experiment

For mixed community Mixed culture; Agromyces sp. SAI_196 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Agromyces sp. SAI_196 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms