Experiment set5S546 for Enterobacter sp. TBS_079

Compare to:

M9 plate, 1:1 coculture with Agromyces sp. SAI_196

200 most important genes:

  gene name fitness t score description  
MPMX20_03571 -4.4 -1.1 tRNA-Arg compare
MPMX20_00086 -4.1 -2.7 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_00831 -4.1 -2.8 RNA polymerase-binding transcription factor DksA compare
MPMX20_01972 -3.9 -1.0 tRNA-Val compare
MPMX20_04670 -3.7 -1.8 hypothetical protein compare
MPMX20_01989 -3.7 -1.9 hypothetical protein compare
MPMX20_02707 -3.5 -1.5 Septum site-determining protein MinC compare
MPMX20_03285 -3.5 -0.9 hypothetical protein compare
MPMX20_03396 -3.4 -2.4 Nucleoside diphosphate kinase compare
MPMX20_01434 -3.4 -1.6 putative protein YbiI compare
MPMX20_02591 -3.4 -4.6 DNA-binding protein H-NS compare
MPMX20_03301 -3.3 -1.6 hypothetical protein compare
MPMX20_03405 -3.3 -1.2 Protein IscX compare
MPMX20_04628 -3.3 -1.4 ATP synthase protein I compare
MPMX20_01370 -3.2 -2.2 Peptidoglycan-associated lipoprotein compare
MPMX20_01356 -3.2 -5.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00480 -3.2 -1.9 50S ribosomal protein L9 compare
MPMX20_04768 -3.1 -5.6 hypothetical protein compare
MPMX20_04443 -3.1 -1.9 Sec-independent protein translocase protein TatB compare
MPMX20_03687 -3.0 -1.5 hypothetical protein compare
MPMX20_04489 -3.0 -14.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00109 -3.0 -16.0 hypothetical protein compare
MPMX20_01958 -3.0 -0.7 Fumarase D compare
MPMX20_01441 -3.0 -1.6 hypothetical protein compare
MPMX20_00108 -2.9 -15.8 hypothetical protein compare
MPMX20_03211 -2.8 -1.9 NADH-quinone oxidoreductase subunit I compare
MPMX20_01334 -2.8 -7.0 Phosphoglucomutase compare
MPMX20_04306 -2.8 -1.9 Glycerol-3-phosphate regulon repressor compare
MPMX20_03756 -2.7 -3.0 FAD assembly factor SdhE compare
MPMX20_04530 -2.7 -9.4 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02913 -2.7 -1.1 hypothetical protein compare
MPMX20_02572 -2.7 -3.8 hypothetical protein compare
MPMX20_04546 -2.7 -1.6 hypothetical protein compare
MPMX20_01266 -2.7 -1.7 Acireductone dioxygenase compare
MPMX20_03018 -2.6 -1.8 hypothetical protein compare
MPMX20_01765 -2.6 -1.8 Ribonuclease E compare
MPMX20_03509 -2.6 -0.9 hypothetical protein compare
MPMX20_01648 -2.6 -1.2 hypothetical protein compare
MPMX20_02020 -2.6 -7.5 Mannose-6-phosphate isomerase compare
MPMX20_00693 -2.6 -6.6 Phosphoserine phosphatase compare
MPMX20_00456 -2.5 -6.1 Modulator of FtsH protease HflC compare
MPMX20_02767 -2.5 -1.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03016 -2.5 -14.2 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03267 -2.5 -1.6 Phosphohistidine phosphatase SixA compare
MPMX20_03020 -2.5 -6.6 hypothetical protein compare
MPMX20_00105 -2.5 -10.0 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04231 -2.5 -1.0 Bacterioferritin-associated ferredoxin compare
MPMX20_03015 -2.4 -16.2 Phosphoglucosamine mutase compare
MPMX20_03019 -2.4 -12.2 hypothetical protein compare
MPMX20_01950 -2.4 -1.6 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_02768 -2.4 -1.6 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01368 -2.4 -1.6 hypothetical protein compare
MPMX20_03334 -2.3 -0.8 hypothetical protein compare
MPMX20_04559 -2.3 -1.6 Superoxide dismutase [Mn] compare
MPMX20_03209 -2.3 -1.4 NADH-quinone oxidoreductase subunit K compare
MPMX20_00110 -2.3 -14.0 hypothetical protein compare
MPMX20_02894 -2.3 -2.5 hypothetical protein compare
MPMX20_04335 -2.3 -4.1 PanD regulatory factor compare
MPMX20_04442 -2.3 -1.6 Sec-independent protein translocase protein TatC compare
MPMX20_01353 -2.2 -4.0 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04242 -2.2 -1.8 hypothetical protein compare
MPMX20_02732 -2.2 -1.4 PhoP/PhoQ regulator MgrB compare
MPMX20_01367 -2.2 -1.5 Tol-Pal system protein TolR compare
MPMX20_03090 -2.2 -0.8 Methionine--tRNA ligase compare
MPMX20_02919 -2.1 -3.4 hypothetical protein compare
MPMX20_04585 -2.1 -2.5 HTH-type transcriptional repressor CsqR compare
MPMX20_03212 -2.1 -2.5 NADH-quinone oxidoreductase subunit H compare
MPMX20_00793 -2.1 -1.8 DNA gyrase inhibitor YacG compare
MPMX20_04140 -2.1 -2.9 Malate dehydrogenase compare
MPMX20_04279 -2.1 -1.4 Shikimate kinase 1 compare
MPMX20_01472 -2.1 -4.0 Glutathione transport system permease protein GsiD compare
MPMX20_03216 -2.1 -5.8 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02997 -2.1 -4.2 Exodeoxyribonuclease I compare
MPMX20_02624 -2.1 -4.4 Nitrate/nitrite binding protein NrtA compare
MPMX20_01974 -2.0 -1.2 Riboflavin synthase compare
MPMX20_03210 -2.0 -2.7 NADH-quinone oxidoreductase subunit J compare
MPMX20_04440 -2.0 -1.0 Transcription antitermination protein RfaH compare
MPMX20_01369 -2.0 -3.0 Tol-Pal system protein TolB compare
MPMX20_04518 -2.0 -2.7 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01357 -2.0 -2.3 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01351 -2.0 -2.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03217 -2.0 -2.3 NADH-quinone oxidoreductase subunit B compare
MPMX20_04730 -2.0 -3.5 hypothetical protein compare
MPMX20_02877 -2.0 -6.8 hypothetical protein compare
MPMX20_02535 -1.9 -1.5 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_02879 -1.9 -2.7 hypothetical protein compare
MPMX20_03075 -1.9 -3.9 HTH-type transcriptional repressor NagR compare
MPMX20_04639 -1.9 -0.8 Phosphate-binding protein PstS compare
MPMX20_03385 -1.9 -2.5 hypothetical protein compare
MPMX20_02344 -1.9 -1.4 hypothetical protein compare
MPMX20_03017 -1.9 -7.5 hypothetical protein compare
MPMX20_03021 -1.9 -5.4 hypothetical protein compare
MPMX20_01869 -1.9 -5.8 Succinylglutamate desuccinylase compare
MPMX20_03674 -1.9 -2.2 Sulfur acceptor protein CsdE compare
MPMX20_03264 -1.9 -3.0 Chorismate synthase compare
MPMX20_02893 -1.9 -4.3 hypothetical protein compare
MPMX20_00666 -1.8 -1.4 tRNA-Leu compare
MPMX20_00453 -1.8 -1.0 RNA-binding protein Hfq compare
MPMX20_01355 -1.8 -0.4 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01286 -1.8 -0.7 Sec-independent protein translocase protein TatE compare
MPMX20_02920 -1.8 -6.4 hypothetical protein compare
MPMX20_04375 -1.8 -3.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_00801 -1.8 -1.9 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_01366 -1.8 -1.2 Tol-Pal system protein TolQ compare
MPMX20_03095 -1.8 -1.0 hypothetical protein compare
MPMX20_03154 -1.8 -5.2 Inner membrane protein YejM compare
MPMX20_04650 -1.8 -1.2 tRNA modification GTPase MnmE compare
MPMX20_04547 -1.8 -4.6 hypothetical protein compare
MPMX20_03215 -1.8 -1.2 NADH-quinone oxidoreductase subunit E compare
MPMX20_02903 -1.8 -2.3 hypothetical protein compare
MPMX20_01134 -1.8 -4.1 hypothetical protein compare
MPMX20_04079 -1.8 -1.1 Protein-export membrane protein SecG compare
MPMX20_02876 -1.8 -4.9 hypothetical protein compare
MPMX20_00639 -1.8 -2.0 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
MPMX20_02259 -1.7 -3.3 Multiple antibiotic resistance protein MarA compare
MPMX20_02576 -1.7 -1.2 Protein TonB compare
MPMX20_03206 -1.7 -3.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_04301 -1.7 -1.2 Fe/S biogenesis protein NfuA compare
MPMX20_00838 -1.7 -3.5 Iron(3+)-hydroxamate-binding protein FhuD compare
MPMX20_03742 -1.7 -4.0 HTH-type transcriptional regulator GalR compare
MPMX20_00197 -1.7 -0.7 tRNA-Tyr compare
MPMX20_04297 -1.7 -1.6 putative [Fe-S]-dependent transcriptional repressor FeoC compare
MPMX20_02634 -1.7 -3.3 Protein YchQ compare
MPMX20_00505 -1.7 -4.1 Gamma-glutamylcyclotransferase family protein ytfP compare
MPMX20_02646 -1.7 -0.8 hypothetical protein compare
MPMX20_02881 -1.7 -2.0 hypothetical protein compare
MPMX20_03213 -1.7 -4.4 NADH-quinone oxidoreductase subunit G compare
MPMX20_02885 -1.7 -5.0 hypothetical protein compare
MPMX20_00123 -1.7 -1.8 Glutaredoxin 3 compare
MPMX20_02345 -1.7 -2.1 hypothetical protein compare
MPMX20_01021 -1.7 -2.0 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_02025 -1.6 -2.8 hypothetical protein compare
MPMX20_02057 -1.6 -2.7 hypothetical protein compare
MPMX20_02891 -1.6 -5.9 hypothetical protein compare
MPMX20_01358 -1.6 -3.1 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX20_03763 -1.6 -2.7 Glycine cleavage system H protein compare
MPMX20_00038 -1.6 -2.1 hypothetical protein compare
MPMX20_02390 -1.6 -3.8 Arylamine N-acetyltransferase compare
MPMX20_02930 -1.6 -3.8 hypothetical protein compare
MPMX20_00747 -1.6 -2.2 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_02927 -1.6 -4.5 hypothetical protein compare
MPMX20_02147 -1.6 -3.5 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_01019 -1.6 -3.4 Protoheme IX farnesyltransferase compare
MPMX20_04133 -1.6 -2.5 Stringent starvation protein A compare
MPMX20_02902 -1.6 -4.5 Serine/threonine-protein phosphatase 1 compare
MPMX20_02926 -1.5 -3.2 hypothetical protein compare
MPMX20_03490 -1.5 -2.7 SsrA-binding protein compare
MPMX20_03132 -1.5 -4.3 Tagatose-6-phosphate kinase compare
MPMX20_03208 -1.5 -3.3 NADH-quinone oxidoreductase subunit L compare
MPMX20_02868 -1.5 -5.6 Protein UmuD compare
MPMX20_02672 -1.5 -9.2 hypothetical protein compare
MPMX20_02896 -1.5 -5.7 Lysozyme RrrD compare
MPMX20_00054 -1.5 -5.0 Catabolite control protein A compare
MPMX20_02135 -1.5 -2.0 hypothetical protein compare
MPMX20_01866 -1.5 -1.7 Arginine N-succinyltransferase compare
MPMX20_02305 -1.5 -0.8 hypothetical protein compare
MPMX20_00998 -1.5 -1.8 Sec translocon accessory complex subunit YajC compare
MPMX20_02086 -1.5 -2.2 hypothetical protein compare
MPMX20_03498 -1.5 -1.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01567 -1.5 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03433 -1.5 -2.0 Ferredoxin YfhL compare
MPMX20_03835 -1.5 -5.7 hypothetical protein compare
MPMX20_01022 -1.5 -5.3 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_00899 -1.5 -0.8 Ribonuclease HI compare
MPMX20_02901 -1.5 -4.8 hypothetical protein compare
MPMX20_02871 -1.5 -2.9 hypothetical protein compare
MPMX20_02883 -1.5 -4.9 hypothetical protein compare
MPMX20_00875 -1.5 -2.4 putative protein YaeQ compare
MPMX20_00876 -1.4 -2.3 Peptidyl-tRNA hydrolase ArfB compare
MPMX20_02873 -1.4 -3.6 hypothetical protein compare
MPMX20_01352 -1.4 -3.8 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04601 -1.4 -0.9 DNA polymerase I compare
MPMX20_02279 -1.4 -2.0 hypothetical protein compare
MPMX20_04387 -1.4 -3.3 hypothetical protein compare
MPMX20_00919 -1.4 -2.7 Na(+)-translocating NADH-quinone reductase subunit F compare
MPMX20_03214 -1.4 -4.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_04465 -1.4 -2.5 Tyrosine recombinase XerC compare
MPMX20_03054 -1.4 -2.9 hypothetical protein compare
MPMX20_01101 -1.4 -1.2 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_03409 -1.4 -0.9 Iron-binding protein IscA compare
MPMX20_04468 -1.4 -3.3 Iron-sulfur cluster assembly protein CyaY compare
MPMX20_03700 -1.4 -2.2 hypothetical protein compare
MPMX20_00136 -1.4 -0.6 hypothetical protein compare
MPMX20_04466 -1.4 -1.8 hypothetical protein compare
MPMX20_02918 -1.4 -3.4 hypothetical protein compare
MPMX20_04626 -1.4 -0.9 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01785 -1.4 -2.6 hypothetical protein compare
MPMX20_02148 -1.4 -3.3 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX20_03753 -1.4 -3.0 Tyrosine recombinase XerD compare
MPMX20_02908 -1.4 -3.5 hypothetical protein compare
MPMX20_02862 -1.4 -5.4 hypothetical protein compare
MPMX20_04377 -1.3 -4.1 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_04104 -1.3 -1.7 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_00455 -1.3 -4.0 Modulator of FtsH protease HflK compare
MPMX20_02593 -1.3 -6.9 Regulator of RpoS compare
MPMX20_00226 -1.3 -3.6 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04556 -1.3 -3.4 Transcriptional regulatory protein CpxR compare
MPMX20_03239 -1.3 -3.2 Epimerase family protein compare
MPMX20_02393 -1.3 -0.5 hypothetical protein compare
MPMX20_03456 -1.3 -3.3 Alpha-ketoglutarate permease compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Agromyces sp. SAI_196 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Agromyces sp. SAI_196 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms