Experiment set5S521 for Enterobacter sp. TBS_079

Compare to:

1X LB plate, 1:1 coculture with Bacillus zanthoxyli TBS_040

200 most important genes:

  gene name fitness t score description  
MPMX20_04374 -4.7 -3.2 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03986 -4.5 -2.9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03678 -4.3 -1.2 tRNA-Met compare
MPMX20_02591 -4.2 -2.9 DNA-binding protein H-NS compare
MPMX20_04079 -3.6 -1.4 Protein-export membrane protein SecG compare
MPMX20_00136 -3.6 -1.0 hypothetical protein compare
MPMX20_04768 -3.6 -2.5 hypothetical protein compare
MPMX20_01333 -3.5 -2.4 Negative modulator of initiation of replication compare
MPMX20_04443 -3.5 -2.3 Sec-independent protein translocase protein TatB compare
MPMX20_04489 -3.4 -16.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00030 -3.3 -1.5 hypothetical protein compare
MPMX20_03211 -3.2 -2.2 NADH-quinone oxidoreductase subunit I compare
MPMX20_03850 -3.2 -3.1 Biopolymer transport protein ExbD compare
MPMX20_04530 -3.2 -11.4 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04444 -3.1 -1.2 Sec-independent protein translocase protein TatA compare
MPMX20_01020 -3.1 -1.2 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_01846 -3.1 -2.8 hypothetical protein compare
MPMX20_00105 -3.1 -12.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00110 -3.1 -14.8 hypothetical protein compare
MPMX20_03210 -3.0 -2.1 NADH-quinone oxidoreductase subunit J compare
MPMX20_03018 -3.0 -2.1 hypothetical protein compare
MPMX20_03020 -3.0 -7.3 hypothetical protein compare
MPMX20_02020 -3.0 -10.5 Mannose-6-phosphate isomerase compare
MPMX20_02767 -3.0 -2.0 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_01427 -2.9 -2.9 Protein FimG compare
MPMX20_03019 -2.9 -13.1 hypothetical protein compare
MPMX20_03267 -2.9 -2.0 Phosphohistidine phosphatase SixA compare
MPMX20_02704 -2.9 -2.1 hypothetical protein compare
MPMX20_00108 -2.9 -16.3 hypothetical protein compare
MPMX20_02696 -2.8 -5.7 Murein tetrapeptide carboxypeptidase compare
MPMX20_04242 -2.8 -2.1 hypothetical protein compare
MPMX20_02768 -2.8 -1.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01353 -2.8 -3.8 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01368 -2.8 -1.9 hypothetical protein compare
MPMX20_01950 -2.8 -1.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_02287 -2.7 -2.4 hypothetical protein compare
MPMX20_01352 -2.7 -5.8 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02295 -2.7 -1.0 hypothetical protein compare
MPMX20_01357 -2.7 -4.9 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01784 -2.7 -3.2 Purine nucleoside phosphoramidase compare
MPMX20_01866 -2.7 -2.6 Arginine N-succinyltransferase compare
MPMX20_04140 -2.6 -3.5 Malate dehydrogenase compare
MPMX20_03021 -2.6 -4.6 hypothetical protein compare
MPMX20_01722 -2.5 -1.3 putative csgAB operon transcriptional regulatory protein compare
MPMX20_00109 -2.5 -15.9 hypothetical protein compare
MPMX20_03017 -2.5 -8.3 hypothetical protein compare
MPMX20_03385 -2.5 -3.5 hypothetical protein compare
MPMX20_03396 -2.5 -4.7 Nucleoside diphosphate kinase compare
MPMX20_03216 -2.4 -5.9 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_04440 -2.4 -1.3 Transcription antitermination protein RfaH compare
MPMX20_04442 -2.4 -2.8 Sec-independent protein translocase protein TatC compare
MPMX20_03213 -2.4 -4.0 NADH-quinone oxidoreductase subunit G compare
MPMX20_03016 -2.4 -13.0 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01019 -2.4 -5.2 Protoheme IX farnesyltransferase compare
MPMX20_03015 -2.3 -15.6 Phosphoglucosamine mutase compare
MPMX20_01765 -2.3 -3.9 Ribonuclease E compare
MPMX20_00810 -2.3 -2.8 hypothetical protein compare
MPMX20_01286 -2.3 -1.0 Sec-independent protein translocase protein TatE compare
MPMX20_01334 -2.2 -5.8 Phosphoglucomutase compare
MPMX20_02372 -2.2 -2.1 HTH-type transcriptional repressor NsrR compare
MPMX20_01363 -2.2 -4.6 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_03217 -2.2 -2.6 NADH-quinone oxidoreductase subunit B compare
MPMX20_03756 -2.2 -3.1 FAD assembly factor SdhE compare
MPMX20_02546 -2.2 -1.4 hypothetical protein compare
MPMX20_03215 -2.2 -1.5 NADH-quinone oxidoreductase subunit E compare
MPMX20_03212 -2.2 -3.6 NADH-quinone oxidoreductase subunit H compare
MPMX20_04730 -2.1 -5.0 hypothetical protein compare
MPMX20_02576 -2.1 -1.5 Protein TonB compare
MPMX20_04650 -2.1 -2.0 tRNA modification GTPase MnmE compare
MPMX20_03214 -2.1 -5.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_04532 -2.1 -1.6 Met repressor compare
MPMX20_02997 -2.1 -5.8 Exodeoxyribonuclease I compare
MPMX20_01989 -2.1 -1.7 hypothetical protein compare
MPMX20_01355 -2.1 -0.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01869 -2.0 -5.5 Succinylglutamate desuccinylase compare
MPMX20_03983 -2.0 -3.0 hypothetical protein compare
MPMX20_01098 -2.0 -2.6 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_01367 -1.9 -3.4 Tol-Pal system protein TolR compare
MPMX20_01022 -1.9 -7.2 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_03409 -1.9 -1.3 Iron-binding protein IscA compare
MPMX20_00226 -1.9 -4.5 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00899 -1.9 -1.1 Ribonuclease HI compare
MPMX20_03571 -1.9 -1.0 tRNA-Arg compare
MPMX20_04028 -1.9 -1.6 hypothetical protein compare
MPMX20_04112 -1.9 -2.0 Phosphocarrier protein NPr compare
MPMX20_03742 -1.9 -4.8 HTH-type transcriptional regulator GalR compare
MPMX20_01698 -1.9 -3.4 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX20_04626 -1.9 -1.3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00086 -1.8 -2.2 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02258 -1.8 -2.3 hypothetical protein compare
MPMX20_01275 -1.8 -1.7 hypothetical protein compare
MPMX20_04518 -1.8 -4.0 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_00998 -1.8 -1.7 Sec translocon accessory complex subunit YajC compare
MPMX20_00831 -1.8 -3.1 RNA polymerase-binding transcription factor DksA compare
MPMX20_02896 -1.7 -7.4 Lysozyme RrrD compare
MPMX20_00829 -1.7 -4.4 Poly(A) polymerase I compare
MPMX20_03207 -1.7 -3.3 NADH-quinone oxidoreductase subunit M compare
MPMX20_01369 -1.7 -4.1 Tol-Pal system protein TolB compare
MPMX20_02672 -1.7 -10.1 hypothetical protein compare
MPMX20_00773 -1.7 -5.9 Catabolite repressor/activator compare
MPMX20_04483 -1.7 -1.2 Lipid III flippase compare
MPMX20_00210 -1.7 -2.3 PTS system cellobiose-specific EIIB component compare
MPMX20_01350 -1.7 -2.2 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03636 -1.7 -3.0 Adenylyl-sulfate kinase compare
MPMX20_04463 -1.7 -3.7 DNA helicase II compare
MPMX20_04194 -1.7 -1.1 Peptide deformylase compare
MPMX20_01356 -1.7 -4.6 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00494 -1.7 -1.6 hypothetical protein compare
MPMX20_03206 -1.7 -4.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_03308 -1.7 -3.4 Cysteine synthase A compare
MPMX20_04040 -1.7 -2.0 PTS system fructose-specific EIIB component compare
MPMX20_04109 -1.7 -3.8 Ribosome hibernation promoting factor compare
MPMX20_01023 -1.6 -7.9 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_03851 -1.6 -5.0 Biopolymer transport protein ExbB compare
MPMX20_04352 -1.6 -4.6 hypothetical protein compare
MPMX20_04111 -1.6 -2.6 RNase adapter protein RapZ compare
MPMX20_04467 -1.6 -5.0 Diaminopimelate epimerase compare
MPMX20_00107 -1.6 -4.0 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_02009 -1.6 -5.1 Ion-translocating oxidoreductase complex subunit C compare
MPMX20_00106 -1.6 -1.1 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01591 -1.6 -2.8 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX20_00225 -1.6 -4.9 Phosphoribosylamine--glycine ligase compare
MPMX20_02086 -1.6 -2.1 hypothetical protein compare
MPMX20_03490 -1.6 -3.5 SsrA-binding protein compare
MPMX20_00393 -1.6 -4.0 hypothetical protein compare
MPMX20_00825 -1.6 -0.7 Aspartate 1-decarboxylase compare
MPMX20_01118 -1.6 -0.5 hypothetical protein compare
MPMX20_00716 -1.6 -4.0 Transaldolase B compare
MPMX20_03209 -1.6 -1.8 NADH-quinone oxidoreductase subunit K compare
MPMX20_04170 -1.6 -1.1 DNA-binding protein Fis compare
MPMX20_04731 -1.5 -4.2 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_04465 -1.5 -3.2 Tyrosine recombinase XerC compare
MPMX20_03022 -1.5 -1.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03252 -1.5 -2.5 Protein DedA compare
MPMX20_01919 -1.5 -1.5 putative protein YdiE compare
MPMX20_01354 -1.5 -0.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04359 -1.5 -3.3 hypothetical protein compare
MPMX20_01021 -1.5 -2.0 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_02701 -1.5 -1.0 Fatty acid metabolism regulator protein compare
MPMX20_01951 -1.5 -4.5 Pyruvate kinase I compare
MPMX20_01394 -1.5 -5.1 6-phosphogluconolactonase compare
MPMX20_00419 -1.5 -5.6 Aspartate ammonia-lyase compare
MPMX20_03085 -1.5 -2.2 Low molecular weight protein-tyrosine-phosphatase Etp compare
MPMX20_00130 -1.5 -4.8 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_03054 -1.5 -3.5 hypothetical protein compare
MPMX20_03132 -1.4 -3.8 Tagatose-6-phosphate kinase compare
MPMX20_03264 -1.4 -3.0 Chorismate synthase compare
MPMX20_03357 -1.4 -5.5 Exopolyphosphatase compare
MPMX20_02142 -1.4 -3.1 1,2-phenylacetyl-CoA epoxidase, subunit A compare
MPMX20_01351 -1.4 -1.8 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02928 -1.4 -2.5 hypothetical protein compare
MPMX20_01865 -1.4 -4.5 Succinylornithine transaminase compare
MPMX20_00873 -1.4 -1.5 Protein rof compare
MPMX20_04085 -1.4 -2.5 Transcription elongation factor GreA compare
MPMX20_01914 -1.4 -2.1 Hemin import ATP-binding protein HmuV compare
MPMX20_00102 -1.4 -1.0 hypothetical protein compare
MPMX20_04141 -1.4 -2.9 Arginine repressor compare
MPMX20_03813 -1.4 -4.3 Heme chaperone HemW compare
MPMX20_04375 -1.4 -3.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_00813 -1.4 -1.8 hypothetical protein compare
MPMX20_01552 -1.4 -1.0 hypothetical protein compare
MPMX20_01972 -1.4 -0.7 tRNA-Val compare
MPMX20_00816 -1.4 -2.4 hypothetical protein compare
MPMX20_01347 -1.4 -3.0 5-oxoprolinase subunit A compare
MPMX20_02885 -1.4 -4.0 hypothetical protein compare
MPMX20_03602 -1.4 -3.0 Hydrogenase 3 maturation protease compare
MPMX20_01070 -1.4 -3.2 Inner membrane protein YbaN compare
MPMX20_02034 -1.3 -2.3 hypothetical protein compare
MPMX20_00663 -1.3 -4.9 Ferric iron reductase protein FhuF compare
MPMX20_01606 -1.3 -3.6 Macrodomain Ter protein compare
MPMX20_01586 -1.3 -3.5 Aspartate aminotransferase compare
MPMX20_04308 -1.3 -2.8 Thiosulfate sulfurtransferase GlpE compare
MPMX20_04090 -1.3 -3.2 putative inner membrane transporter YhbE compare
MPMX20_02770 -1.3 -1.8 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_02203 -1.3 -1.3 hypothetical protein compare
MPMX20_01266 -1.3 -1.7 Acireductone dioxygenase compare
MPMX20_00700 -1.3 -2.2 Trp operon repressor compare
MPMX20_00127 -1.3 -2.6 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX20_02919 -1.3 -3.6 hypothetical protein compare
MPMX20_00123 -1.3 -1.8 Glutaredoxin 3 compare
MPMX20_04278 -1.3 -1.3 3-dehydroquinate synthase compare
MPMX20_01939 -1.3 -3.0 hypothetical protein compare
MPMX20_00455 -1.3 -4.1 Modulator of FtsH protease HflK compare
MPMX20_02970 -1.3 -2.8 Aconitate isomerase compare
MPMX20_03338 -1.3 -2.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00747 -1.3 -2.7 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03440 -1.3 -1.9 Elongation factor 4 compare
MPMX20_02864 -1.3 -2.6 hypothetical protein compare
MPMX20_02141 -1.3 -3.7 Bifunctional protein PaaZ compare
MPMX20_02920 -1.3 -5.5 hypothetical protein compare
MPMX20_04110 -1.3 -2.1 Nitrogen regulatory protein compare
MPMX20_03882 -1.3 -4.3 Outer membrane protein TolC compare
MPMX20_03627 -1.3 -3.2 RNA polymerase sigma factor RpoS compare
MPMX20_03208 -1.3 -3.1 NADH-quinone oxidoreductase subunit L compare
MPMX20_02891 -1.3 -5.7 hypothetical protein compare
MPMX20_02629 -1.2 -2.4 Glutathione-specific gamma-glutamylcyclotransferase compare
MPMX20_04167 -1.2 -2.2 Ribosomal protein L11 methyltransferase compare
MPMX20_01038 -1.2 -4.4 N-(2-amino-2-carboxyethyl)-L-glutamate synthase compare
MPMX20_04241 -1.2 -2.1 Protein SlyX compare
MPMX20_03234 -1.2 -1.8 putative Nudix hydrolase YfcD compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Bacillus zanthoxyli TBS_040 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Bacillus zanthoxyli TBS_040 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms