Experiment set5S514 for Enterobacter sp. TBS_079

Compare to:

M9 plate, 1:1 coculture with Bacillus zanthoxyli TBS_046

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -3.4 -4.7 hypothetical protein compare
MPMX20_03986 -3.4 -3.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02591 -3.4 -4.6 DNA-binding protein H-NS compare
MPMX20_04443 -3.2 -2.2 Sec-independent protein translocase protein TatB compare
MPMX20_00831 -3.2 -4.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_00255 -2.9 -4.4 Chorismate pyruvate-lyase compare
MPMX20_04444 -2.8 -1.3 Sec-independent protein translocase protein TatA compare
MPMX20_04489 -2.8 -15.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00480 -2.7 -2.6 50S ribosomal protein L9 compare
MPMX20_00108 -2.7 -17.3 hypothetical protein compare
MPMX20_00109 -2.6 -16.0 hypothetical protein compare
MPMX20_03019 -2.6 -10.8 hypothetical protein compare
MPMX20_00105 -2.6 -14.3 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02147 -2.5 -5.4 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_01334 -2.5 -7.1 Phosphoglucomutase compare
MPMX20_00110 -2.5 -14.3 hypothetical protein compare
MPMX20_02020 -2.5 -10.0 Mannose-6-phosphate isomerase compare
MPMX20_03018 -2.4 -2.9 hypothetical protein compare
MPMX20_03015 -2.4 -18.3 Phosphoglucosamine mutase compare
MPMX20_01567 -2.4 -4.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01972 -2.4 -1.1 tRNA-Val compare
MPMX20_04530 -2.4 -8.7 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_01357 -2.4 -4.2 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03209 -2.3 -1.6 NADH-quinone oxidoreductase subunit K compare
MPMX20_04374 -2.3 -3.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03850 -2.2 -2.7 Biopolymer transport protein ExbD compare
MPMX20_01356 -2.1 -6.1 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_03016 -2.1 -13.8 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01950 -2.1 -2.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03020 -2.1 -6.2 hypothetical protein compare
MPMX20_01350 -2.1 -3.2 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03334 -2.1 -0.9 hypothetical protein compare
MPMX20_03017 -2.1 -9.9 hypothetical protein compare
MPMX20_00419 -2.1 -6.3 Aspartate ammonia-lyase compare
MPMX20_04730 -2.1 -4.0 hypothetical protein compare
MPMX20_03687 -2.1 -2.2 hypothetical protein compare
MPMX20_03264 -2.1 -3.8 Chorismate synthase compare
MPMX20_01352 -2.1 -5.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04442 -2.0 -2.8 Sec-independent protein translocase protein TatC compare
MPMX20_04375 -2.0 -6.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01020 -2.0 -1.3 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_03021 -2.0 -4.6 hypothetical protein compare
MPMX20_03338 -2.0 -1.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04306 -2.0 -3.6 Glycerol-3-phosphate regulon repressor compare
MPMX20_02767 -1.9 -2.3 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04650 -1.9 -1.3 tRNA modification GTPase MnmE compare
MPMX20_03354 -1.9 -5.0 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03851 -1.9 -6.2 Biopolymer transport protein ExbB compare
MPMX20_04518 -1.9 -2.9 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01286 -1.9 -1.0 Sec-independent protein translocase protein TatE compare
MPMX20_03216 -1.9 -5.3 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01368 -1.9 -2.2 hypothetical protein compare
MPMX20_02919 -1.9 -6.8 hypothetical protein compare
MPMX20_04427 -1.8 -0.8 5S ribosomal RNA compare
MPMX20_00197 -1.8 -0.9 tRNA-Tyr compare
MPMX20_04110 -1.8 -1.8 Nitrogen regulatory protein compare
MPMX20_04141 -1.8 -3.8 Arginine repressor compare
MPMX20_03479 -1.8 -1.6 30S ribosomal protein S16 compare
MPMX20_03206 -1.8 -3.4 NADH-quinone oxidoreductase subunit N compare
MPMX20_01607 -1.8 -3.1 Outer membrane protein A compare
MPMX20_02997 -1.8 -4.7 Exodeoxyribonuclease I compare
MPMX20_00258 -1.8 -2.9 Diacylglycerol kinase compare
MPMX20_03742 -1.7 -3.7 HTH-type transcriptional regulator GalR compare
MPMX20_00929 -1.7 -1.5 tRNA-Thr compare
MPMX20_03210 -1.7 -2.6 NADH-quinone oxidoreductase subunit J compare
MPMX20_02896 -1.7 -8.9 Lysozyme RrrD compare
MPMX20_00722 -1.7 -5.3 Na(+)/H(+) antiporter NhaA compare
MPMX20_02918 -1.7 -3.8 hypothetical protein compare
MPMX20_01351 -1.7 -2.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_00838 -1.7 -4.2 Iron(3+)-hydroxamate-binding protein FhuD compare
MPMX20_01098 -1.6 -2.2 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_01355 -1.6 -0.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01353 -1.6 -2.8 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_02597 -1.6 -2.7 tRNA-Tyr compare
MPMX20_01349 -1.6 -3.2 Citrate synthase compare
MPMX20_02768 -1.6 -1.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03211 -1.6 -2.1 NADH-quinone oxidoreductase subunit I compare
MPMX20_02765 -1.6 -3.4 High-affinity zinc uptake system membrane protein ZnuB compare
MPMX20_01765 -1.6 -3.0 Ribonuclease E compare
MPMX20_02920 -1.6 -4.8 hypothetical protein compare
MPMX20_04137 -1.6 -2.8 Inner membrane protein YhcB compare
MPMX20_00225 -1.5 -3.7 Phosphoribosylamine--glycine ligase compare
MPMX20_00022 -1.5 -2.5 Inner membrane protein YidG compare
MPMX20_04377 -1.5 -7.0 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_02593 -1.5 -6.2 Regulator of RpoS compare
MPMX20_04626 -1.5 -1.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03355 -1.5 -5.2 Phosphoribosylglycinamide formyltransferase compare
MPMX20_04140 -1.5 -3.7 Malate dehydrogenase compare
MPMX20_03591 -1.5 -3.5 Glucitol operon repressor compare
MPMX20_01367 -1.5 -2.7 Tol-Pal system protein TolR compare
MPMX20_00226 -1.5 -3.7 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04467 -1.5 -4.0 Diaminopimelate epimerase compare
MPMX20_03409 -1.5 -1.0 Iron-binding protein IscA compare
MPMX20_04466 -1.5 -3.4 hypothetical protein compare
MPMX20_00453 -1.5 -1.2 RNA-binding protein Hfq compare
MPMX20_03678 -1.5 -0.9 tRNA-Met compare
MPMX20_01097 -1.5 -3.8 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03385 -1.5 -3.8 hypothetical protein compare
MPMX20_02898 -1.5 -8.4 hypothetical protein compare
MPMX20_00998 -1.4 -2.2 Sec translocon accessory complex subunit YajC compare
MPMX20_04162 -1.4 -2.2 3-dehydroquinate dehydratase compare
MPMX20_03490 -1.4 -3.0 SsrA-binding protein compare
MPMX20_00693 -1.4 -5.3 Phosphoserine phosphatase compare
MPMX20_03641 -1.4 -4.3 Phosphoadenosine phosphosulfate reductase compare
MPMX20_01370 -1.4 -2.1 Peptidoglycan-associated lipoprotein compare
MPMX20_01865 -1.4 -5.8 Succinylornithine transaminase compare
MPMX20_04133 -1.4 -5.0 Stringent starvation protein A compare
MPMX20_04483 -1.4 -1.0 Lipid III flippase compare
MPMX20_03208 -1.4 -3.0 NADH-quinone oxidoreductase subunit L compare
MPMX20_03212 -1.4 -2.6 NADH-quinone oxidoreductase subunit H compare
MPMX20_01869 -1.4 -4.6 Succinylglutamate desuccinylase compare
MPMX20_04253 -1.4 -0.6 Malonate decarboxylase acyl carrier protein compare
MPMX20_03396 -1.3 -3.3 Nucleoside diphosphate kinase compare
MPMX20_01333 -1.3 -2.7 Negative modulator of initiation of replication compare
MPMX20_03132 -1.3 -3.7 Tagatose-6-phosphate kinase compare
MPMX20_01363 -1.3 -3.2 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_03215 -1.3 -1.3 NADH-quinone oxidoreductase subunit E compare
MPMX20_02496 -1.3 -0.8 Lipopolysaccharide assembly protein A compare
MPMX20_03571 -1.3 -0.9 tRNA-Arg compare
MPMX20_02696 -1.3 -5.6 Murein tetrapeptide carboxypeptidase compare
MPMX20_04189 -1.3 -1.7 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_00455 -1.3 -5.4 Modulator of FtsH protease HflK compare
MPMX20_02928 -1.3 -2.4 hypothetical protein compare
MPMX20_01369 -1.2 -3.2 Tol-Pal system protein TolB compare
MPMX20_04308 -1.2 -3.1 Thiosulfate sulfurtransferase GlpE compare
MPMX20_00107 -1.2 -3.8 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_00839 -1.2 -5.4 Iron(3+)-hydroxamate import system permease protein FhuB compare
MPMX20_04170 -1.2 -0.8 DNA-binding protein Fis compare
MPMX20_00746 -1.2 -2.1 Protein ApaG compare
MPMX20_03217 -1.2 -2.1 NADH-quinone oxidoreductase subunit B compare
MPMX20_00106 -1.2 -1.2 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02931 -1.2 -5.6 hypothetical protein compare
MPMX20_02586 -1.2 -5.2 Oligopeptide transport system permease protein OppB compare
MPMX20_01068 -1.2 -2.3 hypothetical protein compare
MPMX20_00241 -1.2 -4.2 Glucose-6-phosphate isomerase compare
MPMX20_01478 -1.2 -3.7 Deoxyribose operon repressor compare
MPMX20_01366 -1.2 -1.8 Tol-Pal system protein TolQ compare
MPMX20_04301 -1.2 -1.6 Fe/S biogenesis protein NfuA compare
MPMX20_03207 -1.2 -2.5 NADH-quinone oxidoreductase subunit M compare
MPMX20_04465 -1.2 -2.6 Tyrosine recombinase XerC compare
MPMX20_03214 -1.2 -3.4 NADH-quinone oxidoreductase subunit F compare
MPMX20_03301 -1.2 -1.3 hypothetical protein compare
MPMX20_00452 -1.2 -4.4 tRNA dimethylallyltransferase compare
MPMX20_03426 -1.2 -5.2 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03943 -1.2 -2.9 hypothetical protein compare
MPMX20_00639 -1.2 -2.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
MPMX20_00132 -1.1 -2.5 putative protein YibL compare
MPMX20_02881 -1.1 -1.7 hypothetical protein compare
MPMX20_02598 -1.1 -1.0 tRNA-Tyr compare
MPMX20_02535 -1.1 -1.2 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_02576 -1.1 -1.5 Protein TonB compare
MPMX20_02978 -1.1 -5.3 Ferric aerobactin receptor compare
MPMX20_02927 -1.1 -2.6 hypothetical protein compare
MPMX20_02149 -1.1 -3.1 3-hydroxyadipyl-CoA dehydrogenase compare
MPMX20_00747 -1.1 -2.2 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01085 -1.1 -3.4 HTH-type transcriptional regulator CueR compare
MPMX20_02701 -1.1 -0.8 Fatty acid metabolism regulator protein compare
MPMX20_04188 -1.1 -2.7 hypothetical protein compare
MPMX20_00816 -1.1 -2.4 hypothetical protein compare
MPMX20_00899 -1.1 -1.0 Ribonuclease HI compare
MPMX20_00773 -1.1 -4.1 Catabolite repressor/activator compare
MPMX20_04731 -1.1 -2.7 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_03627 -1.1 -4.5 RNA polymerase sigma factor RpoS compare
MPMX20_01975 -1.1 -6.8 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_03022 -1.1 -0.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03754 -1.1 -2.6 Flavodoxin 2 compare
MPMX20_02922 -1.1 -4.6 hypothetical protein compare
MPMX20_01967 -1.1 -1.3 hypothetical protein compare
MPMX20_01354 -1.1 -0.7 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01801 -1.1 -2.9 NAD-dependent protein deacylase compare
MPMX20_01942 -1.1 -2.3 HTH-type transcriptional repressor BluR compare
MPMX20_00539 -1.1 -4.9 HTH-type transcriptional regulator TreR compare
MPMX20_02923 -1.1 -5.6 hypothetical protein compare
MPMX20_03846 -1.1 -3.1 hypothetical protein compare
MPMX20_02098 -1.0 -3.8 HTH-type transcriptional repressor RspR compare
MPMX20_01019 -1.0 -3.0 Protoheme IX farnesyltransferase compare
MPMX20_00428 -1.0 -1.6 hypothetical protein compare
MPMX20_03213 -1.0 -3.4 NADH-quinone oxidoreductase subunit G compare
MPMX20_02899 -1.0 -3.9 hypothetical protein compare
MPMX20_00728 -1.0 -0.8 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03007 -1.0 -3.0 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_00102 -1.0 -0.7 hypothetical protein compare
MPMX20_04692 -1.0 -0.8 hypothetical protein compare
MPMX20_03447 -1.0 -3.4 ATP-dependent RNA helicase SrmB compare
MPMX20_02883 -1.0 -3.8 hypothetical protein compare
MPMX20_02909 -1.0 -4.0 hypothetical protein compare
MPMX20_02975 -1.0 -3.4 N(6)-hydroxylysine O-acetyltransferase compare
MPMX20_00680 -1.0 -2.9 Deoxyribose-phosphate aldolase compare
MPMX20_00388 -1.0 -0.4 hypothetical protein compare
MPMX20_01332 -1.0 -4.1 Esterase YbfF compare
MPMX20_00641 -1.0 -5.3 NAD/NADP-dependent betaine aldehyde dehydrogenase compare
MPMX20_01542 -1.0 -2.0 Cold shock-like protein CspD compare
MPMX20_02227 -1.0 -5.0 hypothetical protein compare
MPMX20_03674 -1.0 -1.9 Sulfur acceptor protein CsdE compare
MPMX20_01096 -1.0 -3.8 tRNA 2-selenouridine synthase compare
MPMX20_04038 -1.0 -2.7 Glucitol operon repressor compare
MPMX20_04040 -1.0 -1.9 PTS system fructose-specific EIIB component compare
MPMX20_01156 -1.0 -1.5 hypothetical protein compare
MPMX20_04396 -1.0 -3.1 Ribosomal RNA small subunit methyltransferase J compare
MPMX20_01823 -1.0 -3.4 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Bacillus zanthoxyli TBS_046 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Bacillus zanthoxyli TBS_046 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms