Experiment set5S488 for Enterobacter sp. TBS_079

0.1X LB plate, 1:1 coculture with Paenibacillus lautus TBS_090

Group: mixed community
Media: LB (0.1x) + Mixed culture; Paenibacillus lautus TBS_090 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Culturing: Enterobacter_TBS_079_ML3, agar plate, Aerobic, at 30 (C), (Solid)
By: Robin on 3/19/24
Media components: 1 g/L Tryptone, 0.5 g/L Yeast Extract, 0.5 g/L Sodium Chloride (final concentrations)

Specific Phenotypes

For 3 genes in this experiment

For mixed community Mixed culture; Paenibacillus lautus TBS_090 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Paenibacillus lautus TBS_090 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms

SEED Subsystems

Subsystem	#Specific
Glycine Biosynthesis	1
Threonine degradation	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Pentose phosphate pathway
• Fructose and mannose metabolism
• Glycine, serine and threonine metabolism
• Lysine degradation
• Tyrosine metabolism
• Phenylalanine, tyrosine and tryptophan biosynthesis
• alpha-Linolenic acid metabolism
• Naphthalene and anthracene degradation

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
L-threonine degradation III (to methylglyoxal)	3	3	2
L-threonine degradation II	2	2	1
aminopropanol phosphate biosynthesis II	4	3	2
4-hydroxyphenylacetate degradation	8	6	1
superpathway of L-threonine metabolism	18	16	2