Experiment set5S277 for Lysobacter sp. OAE881

Compare to:

Ying_all64 rep C; time point 3

200 most important genes:

  gene name fitness t score description  
ABIE51_RS13890 -6.7 -15.0 RNA polymerase sigma factor RpoE compare
ABIE51_RS03945 -6.1 -10.2 ATP-binding protein compare
ABIE51_RS03265 -6.0 -4.1 trypsin-like peptidase domain-containing protein compare
ABIE51_RS16555 -5.8 -13.0 SLC13 family permease compare
ABIE51_RS11490 -5.7 -25.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE51_RS08040 -5.7 -12.0 glucose-6-phosphate isomerase compare
ABIE51_RS01630 -5.5 -9.8 SIS domain-containing protein compare
ABIE51_RS16420 -5.4 -6.4 TMEM165/GDT1 family protein compare
ABIE51_RS03165 -5.4 -32.4 D-alanyl-D-alanine carboxypeptidase family protein compare
ABIE51_RS05300 -5.2 -5.1 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS04310 -5.2 -5.0 glycosyltransferase compare
ABIE51_RS01370 -5.2 -21.8 glycoside hydrolase family 3 N-terminal domain-containing protein compare
ABIE51_RS00035 -5.1 -26.9 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS13260 -5.1 -5.0 amino acid permease compare
ABIE51_RS15615 -4.8 -8.0 glucose-1-phosphate thymidylyltransferase RfbA compare
ABIE51_RS01280 -4.5 -3.1 lipid-binding SYLF domain-containing protein compare
ABIE51_RS03935 -4.4 -4.3 hypothetical protein compare
ABIE51_RS06340 -4.3 -11.3 hypothetical protein compare
ABIE51_RS17515 -4.3 -19.0 phosphomethylpyrimidine synthase ThiC compare
ABIE51_RS00990 -4.2 -16.4 VacJ family lipoprotein compare
ABIE51_RS01000 -4.2 -17.1 ABC transporter substrate-binding protein compare
ABIE51_RS09450 -4.2 -7.3 gephyrin-like molybdotransferase Glp compare
ABIE51_RS10470 -4.2 -11.6 SMP-30/gluconolactonase/LRE family protein compare
ABIE51_RS06000 -3.9 -2.7 pyridoxal phosphate-dependent aminotransferase compare
ABIE51_RS09045 -3.9 -4.6 GntR family transcriptional regulator compare
ABIE51_RS16260 -3.9 -2.6 hypothetical protein compare
ABIE51_RS06905 -3.9 -4.6 RIP metalloprotease RseP compare
ABIE51_RS08785 -3.8 -14.6 ScpA family protein compare
ABIE51_RS14045 -3.8 -4.4 MoaD/ThiS family protein compare
ABIE51_RS19030 -3.8 -6.2 endonuclease/exonuclease/phosphatase family protein compare
ABIE51_RS02300 -3.7 -5.6 lauroyl acyltransferase compare
ABIE51_RS15620 -3.7 -5.0 dTDP-glucose 4,6-dehydratase compare
ABIE51_RS15890 -3.7 -3.6 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE51_RS14040 -3.6 -7.6 molybdenum cofactor biosynthesis protein MoaE compare
ABIE51_RS01635 -3.6 -2.5 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE51_RS06785 -3.6 -20.6 ribonuclease G compare
ABIE51_RS08880 -3.6 -13.5 chromosome segregation protein SMC compare
ABIE51_RS17095 -3.5 -15.1 type I glyceraldehyde-3-phosphate dehydrogenase compare
ABIE51_RS13420 -3.5 -14.9 hypothetical protein compare
ABIE51_RS03160 -3.5 -12.0 septal ring lytic transglycosylase RlpA family protein compare
ABIE51_RS05540 -3.4 -2.3 hypothetical protein compare
ABIE51_RS16510 -3.4 -11.4 HAMP domain-containing sensor histidine kinase compare
ABIE51_RS09445 -3.4 -8.9 NTP transferase domain-containing protein compare
ABIE51_RS04505 -3.4 -6.4 phosphoribosylformylglycinamidine synthase compare
ABIE51_RS16065 -3.4 -8.0 pyrroline-5-carboxylate reductase compare
ABIE51_RS03940 -3.3 -3.2 response regulator transcription factor compare
ABIE51_RS08780 -3.3 -8.5 SMC-Scp complex subunit ScpB compare
ABIE51_RS01010 -3.3 -15.4 MlaE family lipid ABC transporter permease subunit compare
ABIE51_RS19265 -3.3 -14.7 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
ABIE51_RS17630 -3.2 -3.1 LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase compare
ABIE51_RS02980 -3.2 -6.4 4Fe-4S dicluster domain-containing protein compare
ABIE51_RS17770 -3.2 -3.1 phosphoribosylamine--glycine ligase compare
ABIE51_RS02450 -3.2 -5.6 MarR family transcriptional regulator compare
ABIE51_RS18545 -3.2 -2.1 DUF6249 domain-containing protein compare
ABIE51_RS02990 -3.2 -15.4 molybdopterin oxidoreductase family protein compare
ABIE51_RS01015 -3.2 -10.8 ABC transporter ATP-binding protein compare
ABIE51_RS01005 -3.1 -26.2 outer membrane lipid asymmetry maintenance protein MlaD compare
ABIE51_RS05180 -3.0 -5.6 glycosyltransferase compare
ABIE51_RS11495 -3.0 -8.7 ATP-dependent Clp protease adapter ClpS compare
ABIE51_RS02280 -3.0 -5.5 CDP-glycerol glycerophosphotransferase family protein compare
ABIE51_RS04250 -3.0 -10.5 maleylacetoacetate isomerase compare
ABIE51_RS13540 -2.9 -9.0 SUMF1/EgtB/PvdO family nonheme iron enzyme compare
ABIE51_RS09370 -2.9 -13.1 nucleoside-diphosphate sugar epimerase/dehydratase compare
ABIE51_RS13480 -2.8 -3.2 phytoene/squalene synthase family protein compare
ABIE51_RS14155 -2.8 -4.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABIE51_RS19165 -2.8 -9.1 heme o synthase compare
ABIE51_RS14085 -2.8 -1.8 DUF6165 family protein compare
ABIE51_RS14060 -2.7 -6.0 MBL fold metallo-hydrolase compare
ABIE51_RS14050 -2.7 -3.9 cyclic pyranopterin monophosphate synthase MoaC compare
ABIE51_RS06180 -2.7 -5.2 amidophosphoribosyltransferase compare
ABIE51_RS03155 -2.7 -13.2 lytic murein transglycosylase B compare
ABIE51_RS09105 -2.7 -3.5 NAD-glutamate dehydrogenase domain-containing protein compare
ABIE51_RS02975 -2.6 -8.5 DmsC/YnfH family molybdoenzyme membrane anchor subunit compare
ABIE51_RS04245 -2.6 -1.8 fumarylacetoacetate hydrolase family protein compare
ABIE51_RS04085 -2.6 -13.1 homogentisate 1,2-dioxygenase compare
ABIE51_RS13530 -2.6 -12.5 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE51_RS14055 -2.5 -3.8 GTP 3',8-cyclase MoaA compare
ABIE51_RS04390 -2.5 -9.2 glycoside hydrolase family 99-like domain-containing protein compare
ABIE51_RS16735 -2.5 -4.8 flagellar export chaperone FliS compare
ABIE51_RS14070 -2.5 -5.6 glycosyltransferase family 9 protein compare
ABIE51_RS17060 -2.5 -8.8 phosphoglycerate kinase compare
ABIE51_RS17450 -2.4 -18.1 Mur ligase family protein compare
ABIE51_RS04475 -2.4 -14.4 leucyl aminopeptidase compare
ABIE51_RS17705 -2.4 -15.4 protein-disulfide reductase DsbD compare
ABIE51_RS15440 -2.3 -6.6 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE51_RS06815 -2.3 -12.6 (2E,6E)-farnesyl diphosphate synthase compare
ABIE51_RS02220 -2.3 -6.7 DNA topoisomerase I compare
ABIE51_RS00515 -2.3 -5.0 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
ABIE51_RS07575 -2.3 -2.5 FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein compare
ABIE51_RS09425 -2.3 -1.5 helix-turn-helix domain-containing protein compare
ABIE51_RS11685 -2.3 -14.7 CHASE domain-containing protein compare
ABIE51_RS18995 -2.3 -8.7 alpha-glucosidase family protein compare
ABIE51_RS09065 -2.2 -8.6 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE51_RS17320 -2.2 -18.1 aminopeptidase P N-terminal domain-containing protein compare
ABIE51_RS13300 -2.2 -4.6 imidazole glycerol phosphate synthase subunit HisF compare
ABIE51_RS03185 -2.1 -6.7 carboxy terminal-processing peptidase compare
ABIE51_RS19015 -2.1 -12.3 cytochrome c4 compare
ABIE51_RS15970 -2.1 -4.5 HPr(Ser) kinase/phosphatase compare
ABIE51_RS16485 -2.1 -2.3 adenosylhomocysteinase compare
ABIE51_RS00995 -2.1 -3.1 STAS domain-containing protein compare
ABIE51_RS11510 -2.1 -15.3 tRNA 2-thiouridine(34) synthase MnmA compare
ABIE51_RS15905 -2.1 -11.9 DUF3108 domain-containing protein compare
ABIE51_RS15990 -2.1 -3.3 PTS sugar transporter subunit IIA compare
ABIE51_RS19180 -2.1 -4.0 SURF1 family protein compare
ABIE51_RS08720 -2.1 -7.6 heme exporter protein CcmB compare
ABIE51_RS17270 -2.0 -4.0 DNA-directed RNA polymerase subunit omega compare
ABIE51_RS04620 -2.0 -12.7 serine hydroxymethyltransferase compare
ABIE51_RS01265 -2.0 -10.7 twin-arginine translocase subunit TatC compare
ABIE51_RS14150 -2.0 -8.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABIE51_RS13115 -2.0 -11.9 Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein compare
ABIE51_RS05295 -2.0 -2.6 response regulator transcription factor compare
ABIE51_RS04075 -2.0 -12.8 4-hydroxyphenylpyruvate dioxygenase compare
ABIE51_RS14530 -2.0 -9.0 hypothetical protein compare
ABIE51_RS09340 -2.0 -5.3 (d)CMP kinase compare
ABIE51_RS19210 -1.9 -14.0 cytochrome c oxidase subunit II compare
ABIE51_RS12565 -1.9 -15.0 acyl-CoA dehydrogenase family protein compare
ABIE51_RS13265 -1.9 -13.8 amino acid permease compare
ABIE51_RS17200 -1.9 -9.9 citrate synthase compare
ABIE51_RS15435 -1.9 -12.5 cytochrome bc complex cytochrome b subunit compare
ABIE51_RS00785 -1.9 -6.3 energy transducer TonB compare
ABIE51_RS13380 -1.9 -6.1 argininosuccinate lyase compare
ABIE51_RS08715 -1.9 -11.4 heme ABC transporter permease CcmC compare
ABIE51_RS00635 -1.9 -3.0 hybrid sensor histidine kinase/response regulator compare
ABIE51_RS15430 -1.9 -11.1 cytochrome c1 compare
ABIE51_RS08695 -1.9 -7.5 DsbE family thiol:disulfide interchange protein compare
ABIE51_RS08705 -1.8 -9.4 cytochrome c maturation protein CcmE compare
ABIE51_RS19195 -1.8 -14.1 cytochrome c oxidase assembly protein compare
ABIE51_RS09280 -1.8 -10.7 cytochrome c compare
ABIE51_RS16415 -1.8 -13.3 aldo/keto reductase compare
ABIE51_RS09365 -1.8 -2.3 glycosyltransferase family 4 protein compare
ABIE51_RS11120 -1.8 -4.8 ATP-binding cassette domain-containing protein compare
ABIE51_RS00845 -1.8 -10.8 response regulator compare
ABIE51_RS17400 -1.8 -14.1 DUF192 domain-containing protein compare
ABIE51_RS06820 -1.8 -4.9 exodeoxyribonuclease VII small subunit compare
ABIE51_RS17530 -1.8 -10.6 threonine synthase compare
ABIE51_RS04805 -1.7 -1.2 A24 family peptidase compare
ABIE51_RS08725 -1.7 -5.0 heme ABC exporter ATP-binding protein CcmA compare
ABIE51_RS17440 -1.7 -14.2 bifunctional DedA family/phosphatase PAP2 family protein compare
ABIE51_RS01110 -1.7 -6.2 c-type cytochrome compare
ABIE51_RS09375 -1.7 -9.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
ABIE51_RS09275 -1.7 -9.4 cytochrome c compare
ABIE51_RS00725 -1.7 -9.1 energy transducer TonB compare
ABIE51_RS17615 -1.7 -10.8 TolC family outer membrane protein compare
ABIE51_RS16320 -1.7 -9.3 TetR/AcrR family transcriptional regulator compare
ABIE51_RS06550 -1.7 -9.1 FtsH protease activity modulator HflK compare
ABIE51_RS19205 -1.7 -13.8 cytochrome c oxidase subunit I compare
ABIE51_RS06015 -1.7 -2.3 methylisocitrate lyase compare
ABIE51_RS06535 -1.7 -7.5 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABIE51_RS06555 -1.6 -6.7 protease modulator HflC compare
ABIE51_RS12635 -1.6 -3.3 hypothetical protein compare
ABIE51_RS08700 -1.6 -11.7 heme lyase CcmF/NrfE family subunit compare
ABIE51_RS08690 -1.6 -3.6 cytochrome c-type biogenesis protein compare
ABIE51_RS11110 -1.6 -5.1 molybdate ABC transporter substrate-binding protein compare
ABIE51_RS16395 -1.6 -1.0 PDZ domain-containing protein compare
ABIE51_RS06255 -1.6 -8.8 formimidoylglutamate deiminase compare
ABIE51_RS17345 -1.6 -9.0 cell division protein ZapA compare
ABIE51_RS00840 -1.6 -8.4 ATP-binding protein compare
ABIE51_RS07005 -1.6 -5.0 asparagine synthase B compare
ABIE51_RS06500 -1.5 -3.3 peptidoglycan DD-metalloendopeptidase family protein compare
ABIE51_RS15035 -1.5 -10.9 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
ABIE51_RS04420 -1.5 -9.5 ABC transporter permease compare
ABIE51_RS17190 -1.5 -1.0 penicillin-binding protein 1A compare
ABIE51_RS19190 -1.5 -11.4 cytochrome c oxidase subunit 3 compare
ABIE51_RS11515 -1.5 -6.2 high frequency lysogenization protein HflD compare
ABIE51_RS09415 -1.5 -11.8 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
ABIE51_RS02265 -1.5 -2.4 glycosyltransferase family 2 protein compare
ABIE51_RS06980 -1.5 -2.1 [protein-PII] uridylyltransferase compare
ABIE51_RS19215 -1.5 -12.7 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA compare
ABIE51_RS01335 -1.5 -5.6 barstar family protein compare
ABIE51_RS13145 -1.5 -9.4 acetyl-CoA C-acyltransferase compare
ABIE51_RS15095 -1.4 -4.8 TMEM43 family protein compare
ABIE51_RS03125 -1.4 -10.2 carbohydrate kinase family protein compare
ABIE51_RS13815 -1.4 -7.1 beta-N-acetylhexosaminidase compare
ABIE51_RS04550 -1.4 -4.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
ABIE51_RS04535 -1.4 -5.7 type II secretion system major pseudopilin GspG compare
ABIE51_RS03135 -1.4 -3.7 rod shape-determining protein MreC compare
ABIE51_RS04850 -1.4 -10.2 sigma-54 dependent transcriptional regulator compare
ABIE51_RS17670 -1.4 -7.5 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare
ABIE51_RS04410 -1.4 -6.3 MlaD family protein compare
ABIE51_RS15375 -1.4 -6.8 SDR family NAD(P)-dependent oxidoreductase compare
ABIE51_RS19170 -1.4 -9.3 COX15/CtaA family protein compare
ABIE51_RS05045 -1.3 -1.9 Holliday junction branch migration protein RuvA compare
ABIE51_RS19175 -1.3 -5.9 hypothetical protein compare
ABIE51_RS04565 -1.3 -4.1 type II secretion system protein GspM compare
ABIE51_RS02575 -1.3 -2.0 HlyD family secretion protein compare
ABIE51_RS01360 -1.3 -3.4 nitrogen regulation protein NR(I) compare
ABIE51_RS10900 -1.3 -4.6 2-dehydro-3-deoxygalactonokinase compare
ABIE51_RS00925 -1.3 -11.6 phenylalanine 4-monooxygenase compare
ABIE51_RS00700 -1.3 -1.9 ABC transporter ATP-binding protein compare
ABIE51_RS04415 -1.3 -9.5 ABC transporter ATP-binding protein compare
ABIE51_RS11790 -1.2 -7.9 4a-hydroxytetrahydrobiopterin dehydratase compare
ABIE51_RS07815 -1.2 -5.9 carbon storage regulator CsrA compare
ABIE51_RS09095 -1.2 -5.6 metalloregulator ArsR/SmtB family transcription factor compare
ABIE51_RS13310 -1.2 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE51_RS16520 -1.2 -8.9 30S ribosomal protein S6--L-glutamate ligase compare
ABIE51_RS02175 -1.2 -9.7 signal peptide peptidase SppA compare
ABIE51_RS04825 -1.2 -6.3 pilin compare
ABIE51_RS04835 -1.2 -6.8 glycosyltransferase family 2 protein compare
ABIE51_RS05375 -1.2 -5.7 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
ABIE51_RS01025 -1.2 -7.0 exodeoxyribonuclease V subunit beta compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source Ying_all64 in Lysobacter sp. OAE881

For carbon source Ying_all64 across organisms