Experiment set5IT093 for Pseudomonas fluorescens FW300-N2C3

Compare to:

Putrescine Dihydrochloride nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
AO356_12635 +1.9 13.4 XRE family transcriptional regulator compare
AO356_21835 +1.3 2.6 glyoxalase compare
AO356_03855 +1.3 10.8 AAA family ATPase compare
AO356_19780 +1.1 8.9 histidine kinase compare
AO356_28300 +1.0 1.8 hypothetical protein compare
AO356_00130 +0.9 2.3 XRE family transcriptional regulator compare
AO356_19790 +0.9 8.1 TonB-dependent receptor compare
AO356_24335 +0.9 1.6 type VI secretion protein compare
AO356_03065 +0.9 4.5 AAA family ATPase compare
AO356_10715 +0.8 6.8 4-aminobutyrate aminotransferase compare
AO356_02590 +0.8 2.1 hypothetical protein compare
AO356_01840 +0.8 1.1 uracil permease compare
AO356_29160 +0.8 1.1 (2Fe-2S)-binding protein compare
AO356_09940 +0.8 2.4 hypothetical protein compare
AO356_25120 +0.8 2.2 hypothetical protein compare
AO356_01625 +0.7 2.4 RNA polymerase subunit sigma-24 compare
AO356_10555 +0.7 6.1 hemolysin secretion protein D compare
AO356_03665 +0.7 2.4 flagellar hook-length control protein FliK compare
AO356_18855 +0.7 1.7 hypothetical protein compare
AO356_25665 +0.7 1.5 3-beta hydroxysteroid dehydrogenase compare
AO356_27760 +0.7 2.1 LysR family transcriptional regulator compare
AO356_02105 +0.7 1.5 hypothetical protein compare
AO356_10570 +0.7 6.5 large adhesive protein compare
AO356_25395 +0.7 1.4 fimbrial assembly protein FimA compare
AO356_27000 +0.7 3.1 hypothetical protein compare
AO356_21645 +0.7 2.9 succinyl-CoA--3-ketoacid-CoA transferase compare
AO356_25300 +0.7 2.5 hypothetical protein compare
AO356_15440 +0.7 6.2 histidine kinase compare
AO356_26360 +0.7 2.0 enoyl-CoA hydratase compare
AO356_25090 +0.7 2.6 hypothetical protein compare
AO356_21220 +0.7 1.1 peptide ABC transporter substrate-binding protein compare
AO356_22330 +0.6 1.7 hypothetical protein compare
AO356_08385 +0.6 1.7 urease subunit beta compare
AO356_05135 +0.6 1.7 aldehyde dehydrogenase compare
AO356_24770 +0.6 2.2 type II secretion system protein GspG compare
AO356_16690 +0.6 2.9 peptidylprolyl isomerase compare
AO356_09760 +0.6 2.5 glutaredoxin compare
AO356_07190 +0.6 2.0 hypothetical protein compare
AO356_06715 +0.6 1.4 hypothetical protein compare
AO356_10560 +0.6 5.0 ABC transporter compare
AO356_10580 +0.6 4.2 hypothetical protein compare
AO356_29855 +0.6 0.9 hypothetical protein compare
AO356_06685 +0.6 1.1 preprotein translocase subunit YajC compare
AO356_05995 +0.6 1.9 hypothetical protein compare
AO356_02905 +0.6 3.8 amino acid ABC transporter substrate-binding protein compare
AO356_25580 +0.6 2.0 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
AO356_27310 +0.6 2.4 LysR family transcriptional regulator compare
AO356_09560 +0.6 4.9 glucosyltransferase MdoH compare
AO356_03825 +0.6 2.9 flagellar assembly protein FliH compare
AO356_05025 +0.6 3.0 dehydrogenase compare
AO356_06890 +0.6 1.9 cysteine methyltransferase compare
AO356_28610 +0.5 1.4 AraC family transcriptional regulator compare
AO356_16890 +0.5 2.3 hypothetical protein compare
AO356_25510 +0.5 2.0 transcriptional regulator compare
AO356_27835 +0.5 2.6 hypothetical protein compare
AO356_26455 +0.5 0.8 hypothetical protein compare
AO356_29320 +0.5 1.5 dihydrofolate reductase compare
AO356_24305 +0.5 1.8 hypothetical protein compare
AO356_28860 +0.5 1.8 transcriptional regulator compare
AO356_29270 +0.5 1.3 ABC transporter permease compare
AO356_28035 +0.5 2.3 MBL fold metallo-hydrolase compare
AO356_25270 +0.5 1.6 hypothetical protein compare
AO356_03775 +0.5 0.9 flagellar assembly protein FliO compare
AO356_29460 +0.5 2.0 hypothetical protein compare
AO356_13275 +0.5 1.0 multidrug transporter compare
AO356_26805 +0.5 1.4 hypothetical protein compare
AO356_07385 +0.5 0.8 tRNA-Thr compare
AO356_26005 +0.5 1.5 hypothetical protein compare
AO356_24510 +0.5 1.8 ACP phosphodiesterase compare
AO356_22265 +0.5 2.3 hypothetical protein compare
AO356_28630 +0.5 2.4 polar amino acid ABC transporter permease compare
AO356_05605 +0.5 2.6 acetyltransferase compare
AO356_09565 +0.5 3.5 glucan biosynthesis protein G compare
AO356_29025 +0.5 1.3 hypothetical protein compare
AO356_20850 +0.5 2.4 hypothetical protein compare
AO356_00975 +0.5 1.4 hypothetical protein compare
AO356_28405 +0.5 0.9 NADH-dependent FMN reductase compare
AO356_24410 +0.5 1.7 alanine acetyltransferase compare
AO356_20520 +0.5 0.6 oxidoreductase compare
AO356_29470 +0.5 2.2 TetR family transcriptional regulator compare
AO356_27520 +0.5 2.0 betaine-aldehyde dehydrogenase compare
AO356_23995 +0.5 2.1 amino acid ABC transporter compare
AO356_10575 +0.5 1.3 tryptophan synthase subunit beta compare
AO356_16155 +0.5 2.5 hypothetical protein compare
AO356_21310 +0.5 1.3 filamentous hemagglutinin compare
AO356_09325 +0.5 1.8 type II secretion system protein GspH compare
AO356_02700 +0.5 1.3 type III secretion system protein SpaQ compare
AO356_24730 +0.5 1.6 hypothetical protein compare
AO356_08985 +0.5 0.7 hypothetical protein compare
AO356_04740 +0.5 1.8 hypothetical protein compare
AO356_25055 +0.5 2.2 AsnC family transcriptional regulator compare
AO356_04920 +0.5 2.4 protocatechuate 3,4-dioxygenase compare
AO356_09420 +0.4 4.1 peptidase compare
AO356_01415 +0.4 2.6 hypothetical protein compare
AO356_01485 +0.4 2.5 transcriptional regulator compare
AO356_13140 +0.4 1.3 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) compare
AO356_21260 +0.4 0.7 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
AO356_19840 +0.4 2.6 histidine kinase compare
AO356_13425 +0.4 1.5 hypothetical protein compare
AO356_03765 +0.4 2.7 flagellar biosynthetic protein FliQ compare
AO356_14965 +0.4 3.7 ABC transporter substrate-binding protein compare
AO356_16520 +0.4 1.2 Fe-S-oxidoreductase compare
AO356_03830 +0.4 2.2 flagellar motor switch protein FliG compare
AO356_18780 +0.4 0.9 carbon storage regulator compare
AO356_12140 +0.4 1.4 type VI secretion protein compare
AO356_21095 +0.4 0.9 thioesterase compare
AO356_00570 +0.4 2.2 phosphoglycerate mutase compare
AO356_21055 +0.4 1.5 hypothetical protein compare
AO356_28460 +0.4 1.6 short-chain dehydrogenase compare
AO356_28510 +0.4 1.3 xylose transporter compare
AO356_27765 +0.4 1.2 hypothetical protein compare
AO356_18850 +0.4 1.7 hypothetical protein compare
AO356_15200 +0.4 3.0 hypothetical protein compare
AO356_01515 +0.4 1.8 N-formylglutamate amidohydrolase compare
AO356_26060 +0.4 1.2 fe2+ zn2+ uptake regulation protein compare
AO356_19145 +0.4 1.3 5,6-dimethylbenzimidazole synthase compare
AO356_16995 +0.4 2.2 hypothetical protein compare
AO356_29485 +0.4 2.0 LysR family transcriptional regulator compare
AO356_20140 +0.4 2.4 septum formation inhibitor Maf compare
AO356_08035 +0.4 1.8 ArsR family transcriptional regulator compare
AO356_27965 +0.4 0.9 benzaldehyde dehydrogenase compare
AO356_29590 +0.4 1.2 ester cyclase compare
AO356_26255 +0.4 1.6 chemotaxis protein CheY compare
AO356_23900 +0.4 2.0 universal stress protein compare
AO356_27390 +0.4 1.2 ATPase compare
AO356_08720 +0.4 2.9 thiosulfate sulfurtransferase compare
AO356_24755 +0.4 0.8 type II secretion system protein GspH compare
AO356_04400 +0.4 1.6 hypothetical protein compare
AO356_23825 +0.4 2.0 long-chain acyl-CoA synthetase compare
AO356_23325 +0.4 1.4 short-chain dehydrogenase compare
AO356_17110 +0.4 2.7 methyltransferase compare
AO356_26730 +0.4 1.0 cupin compare
AO356_06580 +0.4 0.9 GTP-binding protein compare
AO356_01170 +0.4 1.2 glycosyl transferase family 1 compare
AO356_26390 +0.4 1.2 hypothetical protein compare
AO356_17400 +0.4 1.4 transcriptional regulator compare
AO356_29255 +0.4 1.5 hypothetical protein compare
AO356_28505 +0.4 1.6 sugar ABC transporter substrate-binding protein compare
AO356_10180 +0.4 1.9 hypothetical protein compare
AO356_10785 +0.4 2.7 poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD compare
AO356_18675 +0.4 1.6 hypothetical protein compare
AO356_29340 +0.4 1.9 multidrug DMT transporter permease compare
AO356_00415 +0.4 2.0 transporter compare
AO356_07900 +0.4 2.8 diguanylate cyclase compare
AO356_27370 +0.4 1.5 nitrile hydratase compare
AO356_26345 +0.4 1.4 3-hydroxy-2-methylbutyryl-CoA dehydrogenase compare
AO356_18535 +0.4 1.5 class I peptide chain release factor compare
AO356_03915 +0.4 2.5 flagellar biosynthesis protein FlgI compare
AO356_00920 +0.4 1.0 cold-shock protein compare
AO356_06740 +0.4 1.9 hypothetical protein compare
AO356_10565 +0.4 3.3 channel protein TolC compare
AO356_00575 +0.4 0.8 SCP-2 family sterol carrier protein compare
AO356_16135 +0.4 2.0 competence protein TfoX compare
AO356_25565 +0.4 0.8 2-oxo-hepta-3-ene-1,7-dioate hydratase compare
AO356_25840 +0.4 1.3 peptidylprolyl isomerase compare
AO356_09750 +0.4 2.2 rRNA methylase compare
AO356_12715 +0.4 1.5 hypothetical protein compare
AO356_01240 +0.4 0.9 glucarate dehydratase compare
AO356_26810 +0.4 2.4 ADP/ATP translocating protein compare
AO356_21510 +0.4 1.1 addiction module toxin RelE compare
AO356_04610 +0.4 2.0 transcriptional regulator compare
AO356_16725 +0.4 1.3 HopJ type III effector protein compare
AO356_22435 +0.4 1.7 decarboxylase compare
AO356_06860 +0.4 1.8 D-ala-D-ala transporter subunit compare
AO356_10895 +0.4 2.0 Holliday junction resolvase compare
AO356_20720 +0.4 1.5 glyoxalase compare
AO356_21175 +0.4 1.5 RNA polymerase subunit sigma compare
AO356_15590 +0.4 1.4 shikimate dehydrogenase compare
AO356_05440 +0.4 1.0 hypothetical protein compare
AO356_26845 +0.4 0.9 hypothetical protein compare
AO356_04145 +0.4 1.6 hypothetical protein compare
AO356_08520 +0.4 2.3 nicotinate phosphoribosyltransferase compare
AO356_02845 +0.4 1.9 antibiotic synthesis protein MbtH compare
AO356_01205 +0.4 1.8 hypothetical protein compare
AO356_26820 +0.3 1.1 hypothetical protein compare
AO356_22585 +0.3 0.7 MerR family transcriptional regulator compare
AO356_28370 +0.3 1.4 ABC transporter ATP-binding protein compare
AO356_03055 +0.3 2.8 hypothetical protein compare
AO356_28515 +0.3 1.0 sugar ABC transporter permease compare
AO356_07470 +0.3 1.7 MFS transporter compare
AO356_12170 +0.3 2.3 hypothetical protein compare
AO356_05680 +0.3 1.4 lysozyme compare
AO356_02745 +0.3 1.5 transcriptional regulator compare
AO356_00795 +0.3 1.5 4Fe-4S ferredoxin compare
AO356_02945 +0.3 1.5 molybdenum cofactor sulfurase compare
AO356_01545 +0.3 0.6 hypothetical protein compare
AO356_22130 +0.3 0.9 hypothetical protein compare
AO356_05130 +0.3 1.4 fusaric acid resistance protein compare
AO356_21695 +0.3 1.4 hypothetical protein compare
AO356_07360 +0.3 2.0 N-acetyl-anhydromuranmyl-L-alanine amidase compare
AO356_26575 +0.3 1.5 low temperature requirement protein A compare
AO356_29105 +0.3 0.8 fumarylacetoacetate hydrolase compare
AO356_01275 +0.3 1.9 GntR family transcriptional regulator compare
AO356_22870 +0.3 1.4 glycerate kinase compare
AO356_23985 +0.3 1.7 LysR family transcriptional regulator compare
AO356_27400 +0.3 1.1 1,2-oxophytodienoate reductase compare
AO356_28410 +0.3 1.8 monooxygenase compare
AO356_18965 +0.3 1.7 transcriptional regulator compare
AO356_23805 +0.3 1.4 hypothetical protein compare
AO356_30080 +0.3 0.9 amidophosphoribosyltransferase compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Putrescine Dihydrochloride in Pseudomonas fluorescens FW300-N2C3

For nitrogen source Putrescine Dihydrochloride across organisms