Experiment set5IT092 for Pseudomonas fluorescens FW300-N2C3

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Carnitine Hydrochloride nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
AO356_13945 -5.0 -10.7 Rieske (2Fe-2S) protein conserved
AO356_13950 -4.9 -9.9 ferredoxin conserved
AO356_13840 -4.7 -9.0 L-carnitine 3-dehydrogenase, thioesterase-like subunit CdhB (EC 1.1.1.108) (from data) conserved
AO356_13905 -4.5 -13.1 N-methylproline demethylase conserved
AO356_13970 -4.4 -12.0 serine hydroxymethyltransferase conserved
AO356_13915 -4.3 -10.4 electron transfer flavoprotein subunit alpha conserved
AO356_13895 -4.3 -10.3 peptidase M19 conserved
AO356_13900 -4.2 -14.0 hydrocarbon binding protein conserved
AO356_13850 -4.1 -10.5 NADPH:quinone reductase conserved
AO356_13985 -3.9 -15.1 sarcosine oxidase subunit alpha conserved
AO356_13975 -3.8 -10.7 sarcosine oxidase subunit beta conserved
AO356_13810 -3.5 -8.8 ABC transporter for Carnitine, permease component (from data) conserved
AO356_13910 -3.4 -12.3 (Fe-S)-binding protein conserved
AO356_13825 -3.3 -11.3 AraC family transcriptional regulator conserved
AO356_13845 -3.3 -11.1 Carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) conserved
AO356_13855 -3.2 -9.9 glycine/betaine ABC transporter substrate-binding protein conserved
AO356_13980 -3.1 -5.1 sarcosine oxidase subunit delta conserved
AO356_13860 -3.1 -5.2 AraC family transcriptional regulator conserved
AO356_08830 -2.8 -7.1 multidrug DMT transporter compare
AO356_13815 -2.8 -10.2 ABC transporter for Carnitine, periplasmic substrate-binding component 1 (from data) conserved
AO356_13805 -2.8 -7.5 ABC transporter for Carnitine, ATPase component (from data) conserved
AO356_05920 -1.5 -7.3 S-(hydroxymethyl)glutathione dehydrogenase compare
AO356_05925 -1.4 -7.3 LysR family transcriptional regulator compare
AO356_13820 -1.2 -7.4 serine dehydratase compare


Specific phenotypes for nitrogen source Carnitine Hydrochloride across organisms