Experiment set5IT092 for Vibrio cholerae E7946 ATCC 55056
LB_Anaerobic_18HR_ZN20A
Group: lb_anaerobicMedia: LB + LB
Culturing: VC_ML4a, tube, Anaerobic, at 37 (C), shaken=orbital
By: Zoe on 9-Nov-20
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 5 genes in this experiment
For lb_anaerobic LB in Vibrio cholerae E7946 ATCC 55056
For lb_anaerobic LB across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Cysteine Biosynthesis | 1 |
| DNA-replication | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| assimilatory sulfate reduction III | 3 | 3 | 1 |
| assimilatory sulfate reduction I | 4 | 4 | 1 |
| superpathway of sulfate assimilation and cysteine biosynthesis | 9 | 9 | 1 |
| superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) | 10 | 5 | 1 |
| superpathway of L-methionine biosynthesis (by sulfhydrylation) | 12 | 10 | 1 |