Experiment set5IT091 for Vibrio cholerae E7946 ATCC 55056
LB_0.5%bileacids_aerobic_18HR_ZN19B
Group: lb_0.5%bileacids_aerobicMedia: LB+0.5%bileacids + LB_0.5%bileacids
Culturing: VC_ML4a, tube, Aerobic, at 37 (C), shaken=orbital
By: Zoe on 9-Nov-20
Specific Phenotypes
For 7 genes in this experiment
For lb_0.5%bileacids_aerobic LB_0.5%bileacids in Vibrio cholerae E7946 ATCC 55056
For lb_0.5%bileacids_aerobic LB_0.5%bileacids across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Cysteine Biosynthesis | 1 |
| DNA-replication | 1 |
| DNA repair, bacterial | 1 |
| Iron acquisition in Vibrio | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| assimilatory sulfate reduction III | 3 | 3 | 1 |
| assimilatory sulfate reduction I | 4 | 4 | 1 |
| superpathway of sulfate assimilation and cysteine biosynthesis | 9 | 9 | 1 |
| superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) | 10 | 5 | 1 |
| superpathway of L-methionine biosynthesis (by sulfhydrylation) | 12 | 10 | 1 |