| | gene | name | fitness | t score | description | |
|---|
| Rru_A3594 | | -3.5 | -6.0 | Histidine biosynthesis protein HisF (NCBI) | compare |
| Rru_A3267 | | -2.9 | -7.3 | Methionine biosynthesis MetW (NCBI) | compare |
| Rru_A3571 | | -2.7 | -3.6 | Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) | compare |
| Rru_A0432 | | -2.6 | -5.9 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| Rru_A3427 | | -2.6 | -13.0 | Tryptophan synthase, beta chain (NCBI) | compare |
| Rru_A2885 | | -2.5 | -11.6 | Carbamoyl-phosphate synthase, small subunit (NCBI) | compare |
| Rru_A3428 | | -2.5 | -9.8 | Tryptophan synthase (NCBI) | compare |
| Rru_A1530 | | -2.5 | -15.3 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| Rru_A2886 | | -2.4 | -14.1 | Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) | compare |
| Rru_A1239 | | -2.4 | -3.8 | Glutamate 5-kinase, ProB-related (NCBI) | compare |
| Rru_A1897 | | -2.4 | -4.1 | Indole-3-glycerol-phosphate synthase (NCBI) | compare |
| Rru_A1189 | | -2.3 | -9.3 | 3-isopropylmalate dehydratase large subunit region (NCBI) | compare |
| Rru_A1854 | | -2.3 | -6.2 | Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) | compare |
| Rru_A0468 | | -2.3 | -2.3 | Acetolactate synthase, small subunit (NCBI) | compare |
| Rru_A3642 | | -2.3 | -3.5 | Negative regulator of class I heat shock protein (NCBI) | compare |
| Rru_A0469 | | -2.3 | -8.1 | Ketol-acid reductoisomerase (NCBI) | compare |
| Rru_A1620 | | -2.3 | -3.9 | hypothetical protein (NCBI) | compare |
| Rru_A1105 | | -2.2 | -4.0 | tRNA synthetase, class II (G, H, P and S) (NCBI) | compare |
| Rru_A1771 | | -2.2 | -0.6 | Sec-independent periplasmic protein translocase (NCBI) | compare |
| Rru_A2574 | | -2.2 | -1.1 | Transcriptional Regulator, BadM/Rrf2 family (NCBI) | compare |
| Rru_A3276 | | -2.1 | -3.2 | Ornithine carbamoyltransferase (NCBI) | compare |
| Rru_A0467 | | -2.1 | -8.5 | Acetolactate synthase, large subunit, biosynthetic type (NCBI) | compare |
| Rru_A1827 | | -2.0 | -7.8 | Glycine hydroxymethyltransferase (NCBI) | compare |
| Rru_A3162 | | -2.0 | -7.7 | Prephenate dehydratase (NCBI) | compare |
| Rru_A2771 | | -2.0 | -3.7 | Histidinol dehydrogenase (NCBI) | compare |
| Rru_A0644 | | -2.0 | -7.8 | hypothetical protein (NCBI) | compare |
| Rru_A3214 | | -1.9 | -7.0 | O-succinylhomoserine sulfhydrylase (NCBI) | compare |
| Rru_A0058 | | -1.9 | -2.4 | Dihydrokaempferol 4-reductase (NCBI) | compare |
| Rru_A3380 | | -1.9 | -2.4 | hypothetical protein (NCBI) | compare |
| Rru_A1593 | | -1.9 | -6.2 | Peptidase M50, putative membrane-associated zinc metallopeptidase (NCBI) | compare |
| Rru_A1786 | | -1.9 | -9.7 | Dihydroxy-acid dehydratase (NCBI) | compare |
| Rru_A0397 | | -1.9 | -3.1 | Argininosuccinate lyase (NCBI) | compare |
| Rru_A3202 | | -1.8 | -11.7 | DNA topoisomerase (NCBI) | compare |
| Rru_A3751 | | -1.8 | -5.1 | Argininosuccinate synthase (NCBI) | compare |
| Rru_A3165 | | -1.7 | -3.2 | Histidinol-phosphate phosphatase, putative, inositol monophosphatase (NCBI) | compare |
| Rru_A2772 | | -1.7 | -1.3 | ATP phosphoribosyltransferase (NCBI) | compare |
| Rru_B0040 | | -1.7 | -12.7 | Type I secretion membrane fusion protein, HlyD (NCBI) | compare |
| Rru_A3277 | | -1.7 | -3.4 | Acetylornithine and succinylornithine aminotransferase (NCBI) | compare |
| Rru_A2656 | | -1.7 | -1.8 | ATP12 ATPase (NCBI) | compare |
| Rru_A1675 | | -1.7 | -7.6 | Cytochrome c assembly protein (NCBI) | compare |
| Rru_A1798 | | -1.6 | -7.0 | Type I secretion outer membrane protein, TolC (NCBI) | compare |
| Rru_A3240 | | -1.6 | -1.5 | Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI) | compare |
| Rru_A3190 | | -1.6 | -2.4 | Aspartate carbamoyltransferase (NCBI) | compare |
| Rru_A2285 | | -1.6 | -1.5 | Nitrogenase molybdenum-iron cofactor biosynthesis protein (NCBI) | compare |
| Rru_A1258 | | -1.5 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A0514 | | -1.5 | -5.7 | Dihydroorotate dehydrogenase 2 (NCBI) | compare |
| Rru_A0963 | | -1.5 | -1.7 | MifU-like protein, Fe-S cluster formation (NCBI) | compare |
| Rru_A3266 | | -1.5 | -4.8 | Homoserine O-acetyltransferase (NCBI) | compare |
| Rru_A1445 | | -1.5 | -5.3 | Ribonucleoside-diphosphate reductase (NCBI) | compare |
| Rru_A1928 | | -1.5 | -5.0 | Yeast 2-isopropylmalate synthase (NCBI) | compare |
| Rru_A0329 | | -1.5 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A1839 | | -1.4 | -2.2 | TRAP-type C4-dicarboxylate transport system periplasmic component-like (NCBI) | compare |
| Rru_A1865 | | -1.4 | -4.0 | Dihydrodipicolinate synthase subfamily (NCBI) | compare |
| Rru_A1718 | | -1.4 | -8.9 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase (NCBI) | compare |
| Rru_A3596 | | -1.4 | -2.2 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) | compare |
| Rru_B0005 | | -1.4 | -2.6 | Glycosyl transferase (NCBI) | compare |
| Rru_B0039 | | -1.4 | -11.3 | Type I secretion system ATPase, PrtD (NCBI) | compare |
| Rru_B0022 | | -1.4 | -0.6 | Resolvase-like (NCBI) | compare |
| Rru_B0037 | | -1.3 | -11.9 | Hemolysin-type calcium-binding region (NCBI) | compare |
| Rru_A1194 | | -1.3 | -1.8 | Protein of unknown function DUF134 (NCBI) | compare |
| Rru_A2507 | | -1.3 | -6.9 | Orotate phosphoribosyl transferase (NCBI) | compare |
| Rru_A2936 | | -1.3 | -4.0 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A2201 | | -1.3 | -1.9 | Peptidase S1C, Do (NCBI) | compare |
| Rru_A1310 | | -1.3 | -4.8 | Acetyl-CoA C-acyltransferase (NCBI) | compare |
| Rru_A2715 | | -1.3 | -6.7 | Acyltransferase 3 (NCBI) | compare |
| Rru_A3378 | | -1.3 | -3.0 | hypothetical protein (NCBI) | compare |
| Rru_A3614 | | -1.2 | -2.4 | Maf-like protein (NCBI) | compare |
| Rru_B0028 | | -1.2 | -1.8 | ABC transporter related (NCBI) | compare |
| Rru_A3783 | | -1.2 | -5.7 | tRNA pseudouridine synthase B (NCBI) | compare |
| Rru_A3191 | | -1.2 | -6.2 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A1191 | | -1.2 | -3.7 | 3-isopropylmalate dehydrogenase (NCBI) | compare |
| Rru_A3393 | | -1.2 | -3.2 | Penicillin-binding protein 1A (NCBI) | compare |
| Rru_A0574 | | -1.2 | -2.8 | Carboxylyase-related protein (NCBI) | compare |
| Rru_A1837 | | -1.2 | -3.4 | Porphobilinogen synthase (NCBI) | compare |
| Rru_A1896 | | -1.1 | -2.2 | Anthranilate phosphoribosyl transferase (NCBI) | compare |
| Rru_A0667 | | -1.1 | -2.9 | Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) | compare |
| Rru_A1444 | | -1.1 | -3.4 | Ribonucleoside-diphosphate reductase (NCBI) | compare |
| Rru_A1435 | | -1.1 | -3.5 | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | compare |
| Rru_A3398 | | -1.0 | -1.3 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A1308 | | -1.0 | -7.1 | Acyl-CoA dehydrogenase (NCBI) | compare |
| Rru_B0043 | | -1.0 | -2.7 | hypothetical protein (NCBI) | compare |
| Rru_A1021 | | -1.0 | -2.9 | Sigma 32 (RpoH) (NCBI) | compare |
| Rru_A3424 | | -1.0 | -1.5 | Orotidine-5'-phosphate decarboxylase (NCBI) | compare |
| Rru_A3626 | | -1.0 | -0.9 | Glucose inhibited division protein (NCBI) | compare |
| Rru_A1436 | | -1.0 | -4.1 | Histidine Kinase (NCBI) | compare |
| Rru_A0909 | | -1.0 | -2.3 | Propanediol utilization protein (NCBI) | compare |
| Rru_A3256 | | -1.0 | -3.0 | Protein of unknown function DUF218 (NCBI) | compare |
| Rru_A3627 | | -1.0 | -2.7 | Cobyrinic acid a,c-diamide synthase (NCBI) | compare |
| Rru_A3766 | | -0.9 | -3.1 | Transcriptional Regulator, MucR family (NCBI) | compare |
| Rru_A1527 | | -0.9 | -2.5 | ABC transporter component (NCBI) | compare |
| Rru_A1085 | | -0.9 | -1.9 | Metallophosphoesterase (NCBI) | compare |
| Rru_A1797 | | -0.9 | -4.2 | hypothetical protein (NCBI) | compare |
| Rru_A0847 | | -0.9 | -1.3 | PepSY-associated TM helix (NCBI) | compare |
| Rru_A3640 | | -0.9 | -0.5 | Ham1-like protein (NCBI) | compare |
| Rru_A0296 | | -0.9 | -1.5 | hypothetical protein (NCBI) | compare |
| Rru_A3264 | | -0.9 | -3.0 | Histidinol-phosphate aminotransferase (NCBI) | compare |
| Rru_A0852 | | -0.9 | -3.9 | hypothetical protein (NCBI) | compare |
| Rru_A2351 | | -0.9 | -4.6 | Macrocin-O-methyltransferase (NCBI) | compare |
| Rru_A3003 | | -0.9 | -3.0 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A2866 | | -0.9 | -2.9 | Ribosomal protein L11 methyltransferase (NCBI) | compare |
| Rru_A2549 | | -0.9 | -2.3 | HAD-superfamily hydrolase subfamily IIB (NCBI) | compare |
| Rru_A1883 | | -0.8 | -1.3 | Magnesium and cobalt transport protein CorA (NCBI) | compare |
| Rru_A1309 | | -0.8 | -5.3 | acetoacetyl-CoA reductase (NCBI) | compare |
| Rru_A3693 | | -0.8 | -2.3 | Protein of unknown function UPF0011 (NCBI) | compare |
| Rru_A3268 | | -0.8 | -1.7 | hypothetical protein (NCBI) | compare |
| Rru_A1434 | | -0.8 | -4.1 | Quinolinate synthetase A (NCBI) | compare |
| Rru_A2085 | | -0.8 | -1.6 | Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) | compare |
| Rru_A2411 | | -0.8 | -3.6 | Aminotransferase, class I and II (NCBI) | compare |
| Rru_A0521 | | -0.8 | -4.1 | CheA Signal Transduction Histidine Kinases (STHK) (NCBI) | compare |
| Rru_A0702 | | -0.8 | -2.7 | Molybdate ABC transporter, ATP-binding protein (NCBI) | compare |
| Rru_A1432 | | -0.8 | -4.4 | Nicotinate-nucleotide pyrophosphorylase (NCBI) | compare |
| Rru_A2396 | | -0.8 | -1.5 | Putative FecR (NCBI) | compare |
| Rru_A3532 | | -0.8 | -2.8 | UspA (NCBI) | compare |
| Rru_A0556 | | -0.8 | -3.8 | Formyltetrahydrofolate deformylase (NCBI) | compare |
| Rru_A1016 | | -0.8 | -4.3 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A3755 | | -0.8 | -4.0 | Heat shock protein Hsp20 (NCBI) | compare |
| Rru_A2184 | | -0.8 | -0.3 | Pyridoxamine 5'-phosphate oxidase-related, FMN-binding (NCBI) | compare |
| Rru_A2800 | | -0.8 | -1.4 | hypothetical protein (NCBI) | compare |
| Rru_A2199 | | -0.8 | -2.9 | hypothetical protein (NCBI) | compare |
| Rru_A3512 | | -0.8 | -3.7 | Glutamine amidotransferase class-I (NCBI) | compare |
| Rru_A1348 | | -0.8 | -1.2 | Protein of unknown function DUF81 (NCBI) | compare |
| Rru_A2345 | | -0.8 | -4.8 | Glycosyl transferase, group 1 (NCBI) | compare |
| Rru_A1911 | | -0.8 | -2.3 | Ferric uptake regulator (FUR) family (NCBI) | compare |
| Rru_A2424 | | -0.8 | -2.6 | Gamma-glutamyltranspeptidase (NCBI) | compare |
| Rru_A3623 | | -0.8 | -1.1 | hypothetical protein (NCBI) | compare |
| Rru_A1265 | | -0.8 | -2.7 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A3020 | | -0.7 | -0.3 | hypothetical protein (NCBI) | compare |
| Rru_B0042 | | -0.7 | -2.0 | hypothetical protein (NCBI) | compare |
| Rru_A3023 | | -0.7 | -3.4 | hypothetical protein (NCBI) | compare |
| Rru_A0643 | | -0.7 | -4.0 | Protein of unknown function DUF152 (NCBI) | compare |
| Rru_A0737 | | -0.7 | -2.0 | Phosphoribosyltransferase (NCBI) | compare |
| Rru_A0657 | | -0.7 | -2.4 | Lysine exporter protein (LYSE/YGGA) (NCBI) | compare |
| Rru_A2140 | | -0.7 | -3.3 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A1055 | | -0.7 | -1.5 | Protein of unknown function DUF1013 (NCBI) | compare |
| Rru_A2455 | | -0.7 | -1.2 | hypothetical protein (NCBI) | compare |
| Rru_A2749 | | -0.7 | -2.4 | Protein of unknown function DUF214 (NCBI) | compare |
| Rru_A2190 | | -0.7 | -1.4 | TRm3 transposase (NCBI) | compare |
| Rru_A0585 | | -0.7 | -1.1 | ABC transporter component (NCBI) | compare |
| Rru_A2761 | | -0.7 | -1.4 | Acyltransferase 3 (NCBI) | compare |
| Rru_A3797 | | -0.7 | -3.3 | 2-polyprenylphenol 6-hydroxylase (NCBI) | compare |
| Rru_A3383 | | -0.7 | -2.4 | Cobalamin (vitamin B12) biosynthesis CbiG protein (NCBI) | compare |
| Rru_A1015 | | -0.7 | -1.1 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A0740 | | -0.7 | -2.0 | Protein of unknown function DUF1178 (NCBI) | compare |
| Rru_A1687 | | -0.7 | -1.0 | Inositol monophosphatase (NCBI) | compare |
| Rru_A2703 | | -0.7 | -2.4 | RNA methyltransferase TrmH, group 3 (NCBI) | compare |
| Rru_A3552 | | -0.7 | -0.7 | hypothetical protein (NCBI) | compare |
| Rru_A2303 | | -0.7 | -2.4 | Deoxyribose-phosphate aldolase (NCBI) | compare |
| Rru_A1627 | | -0.7 | -1.4 | hypothetical protein (NCBI) | compare |
| Rru_A2349 | | -0.7 | -4.0 | hypothetical protein (NCBI) | compare |
| Rru_A3338 | | -0.7 | -2.4 | Protein of unknown function DUF37 (NCBI) | compare |
| Rru_A0236 | | -0.7 | -2.0 | Camphor resistance CrcB protein (NCBI) | compare |
| Rru_A2347 | | -0.7 | -4.3 | hypothetical protein (NCBI) | compare |
| Rru_A0448 | | -0.7 | -3.4 | Protein of unknown function DUF52 (NCBI) | compare |
| Rru_A0986 | | -0.7 | -2.6 | hypothetical protein (NCBI) | compare |
| Rru_A0213 | | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A0902 | | -0.6 | -2.8 | Peptidase C56, PfpI (NCBI) | compare |
| Rru_A0325 | | -0.6 | -1.5 | Molybdenum cofactor biosynthesis protein (NCBI) | compare |
| Rru_A2141 | | -0.6 | -3.4 | Protein of unknown function DUF6, transmembrane (NCBI) | compare |
| Rru_A2538 | | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A2603 | | -0.6 | -2.3 | Two Component Transcriptional Regulator, LuxR family (NCBI) | compare |
| Rru_A0010 | | -0.6 | -1.0 | Sigma-54 (RpoN) (NCBI) | compare |
| Rru_A0089 | | -0.6 | -4.0 | ATP-dependent DNA helicase RecQ (NCBI) | compare |
| Rru_A3197 | | -0.6 | -2.7 | HicB (NCBI) | compare |
| Rru_A1413 | | -0.6 | -1.5 | Protein of unknown function DUF224, cysteine-rich region (NCBI) | compare |
| Rru_A1334 | | -0.6 | -2.5 | Ribose 5-phosphate isomerase B (NCBI) | compare |
| Rru_A1437 | | -0.6 | -2.2 | Sodium:dicarboxylate symporter (NCBI) | compare |
| Rru_A2118 | | -0.6 | -2.8 | ATPase (NCBI) | compare |
| Rru_A1014 | | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| Rru_A1855 | | -0.6 | -3.0 | hypothetical protein (NCBI) | compare |
| Rru_A1959 | | -0.6 | -2.1 | Radical SAM (NCBI) | compare |
| Rru_A1111 | | -0.6 | -3.3 | Pseudouridine synthase, RluD (NCBI) | compare |
| Rru_A2137 | | -0.6 | -1.6 | Protein of unknown function DUF847 (NCBI) | compare |
| Rru_A3188 | | -0.6 | -2.4 | Histidine Kinase (NCBI) | compare |
| Rru_A0073 | | -0.6 | -1.9 | ribosomal subunit interface protein, putative (NCBI) | compare |
| Rru_A2519 | | -0.6 | -1.4 | Protein of unknown function UPF0057 (NCBI) | compare |
| Rru_A3782 | | -0.6 | -1.3 | Ribosome-binding factor A (NCBI) | compare |
| Rru_A1649 | | -0.6 | -1.2 | hypothetical protein (NCBI) | compare |
| Rru_A2242 | | -0.6 | -1.0 | Glutathione-dependent formaldehyde-activating, GFA (NCBI) | compare |
| Rru_A2348 | | -0.6 | -3.7 | Glycosyl transferase (NCBI) | compare |
| Rru_A2161 | | -0.6 | -4.6 | Polyphosphate kinase (NCBI) | compare |
| Rru_A2493 | | -0.6 | -2.3 | Glycosyl transferase, group 1 (NCBI) | compare |
| Rru_A1507 | | -0.6 | -2.3 | short-chain dehydrogenase/reductase SDR (NCBI) | compare |
| Rru_A1776 | | -0.6 | -1.3 | Peptidase M50 (NCBI) | compare |
| Rru_A2194 | | -0.6 | -1.1 | MaoC-like dehydratase (NCBI) | compare |
| Rru_A1454 | | -0.6 | -2.0 | Phage Tail Collar (NCBI) | compare |
| Rru_A3173 | | -0.6 | -1.0 | Transcriptional Regulator, TetR family (NCBI) | compare |
| Rru_A2193 | | -0.6 | -3.9 | Abc1 protein (NCBI) | compare |
| Rru_A1170 | | -0.6 | -1.1 | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | compare |
| Rru_A0253 | | -0.6 | -3.2 | GDP-mannose 4,6-dehydratase (NCBI) | compare |
| Rru_A1829 | | -0.6 | -3.9 | Transcriptional Regulator, MucR family (NCBI) | compare |
| Rru_A1501 | | -0.6 | -2.0 | Transport-associated (NCBI) | compare |
| Rru_A0162 | | -0.6 | -2.3 | Chaperonin Cpn60/TCP-1 (NCBI) | compare |
| Rru_A3119 | | -0.5 | -1.9 | ATPases involved in chromosome partitioning-like (NCBI) | compare |
| Rru_A2512 | | -0.5 | -1.0 | 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI) | compare |
| Rru_A2503 | | -0.5 | -3.4 | Hydroxypyruvate isomerase (NCBI) | compare |
| Rru_A3010 | | -0.5 | -2.4 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A1209 | | -0.5 | -1.3 | Chromate transporter (NCBI) | compare |
| Rru_A2224 | | -0.5 | -0.7 | Transcriptional Regulator, MarR family (NCBI) | compare |
| Rru_A2826 | | -0.5 | -2.6 | Flagellar basal-body rod protein FlgB (NCBI) | compare |
| Rru_A0617 | | -0.5 | -2.3 | Photosynthetic reaction center, H-chain (NCBI) | compare |