Experiment set5IT088 for Pseudomonas fluorescens FW300-N2E2

Compare to:

LB with Magnesium chloride hexahydrate 0.125 M

Group: stress
Media: LB + Magnesium chloride hexahydrate (0.125 M), pH=7
Culturing: pseudo6_N2E2_ML5, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=500 rpm
By: Hans_Hualan on 2/2/2016
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 6 genes in this experiment

For stress Magnesium chloride hexahydrate in Pseudomonas fluorescens FW300-N2E2

For stress Magnesium chloride hexahydrate across organisms

SEED Subsystems

Subsystem #Specific
Carboxysome 1
Copper homeostasis 1
Cyanate hydrolysis 1
Transport of Iron 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
CO2 fixation into oxaloacetate (anaplerotic) 2 2 1
cyanate degradation 3 3 1
C4 photosynthetic carbon assimilation cycle, NADP-ME type 7 4 1
C4 photosynthetic carbon assimilation cycle, NAD-ME type 11 6 1
3-hydroxypropanoate cycle 13 6 1
glyoxylate assimilation 13 6 1
C4 photosynthetic carbon assimilation cycle, PEPCK type 14 9 1
gluconeogenesis II (Methanobacterium thermoautotrophicum) 18 9 1
3-hydroxypropanoate/4-hydroxybutanate cycle 18 9 1
superpathway of the 3-hydroxypropanoate cycle 18 7 1
Methanobacterium thermoautotrophicum biosynthetic metabolism 56 21 1