Experiment set5IT086 for Pantoea sp. MT58
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
Group: survivalMedia: + Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
Culturing: MT058_ML2, tube, Aerobic, at 30 (C)
By: Mike Thorgersen on 09/21/2021
Specific Phenotypes
For 3 genes in this experiment
For survival Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Nitrate and nitrite ammonification | 1 |
| Purine conversions | 1 |
| Queuosine-Archaeosine Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| guanine and guanosine salvage II | 2 | 2 | 1 |
| adenine and adenosine salvage II | 2 | 2 | 1 |
| superpathway of guanosine nucleotides degradation (plants) | 6 | 5 | 2 |
| guanosine nucleotides degradation II | 4 | 4 | 1 |
| adenosine nucleotides degradation I | 8 | 7 | 2 |
| purine nucleotides degradation I (plants) | 12 | 10 | 3 |
| guanosine nucleotides degradation I | 4 | 3 | 1 |
| nitrate reduction VII (denitrification) | 5 | 2 | 1 |
| nitrate reduction I (denitrification) | 5 | 2 | 1 |
| superpathway of purines degradation in plants | 18 | 13 | 3 |