Experiment set5IT085 for Pseudomonas fluorescens FW300-N2C3

Compare to:

L-Leucine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO356_24845 -5.5 -3.8 ATPase compare
AO356_09730 -5.4 -5.3 nitrogen regulation protein NR(I) compare
AO356_18325 -5.4 -9.6 argininosuccinate synthase compare
AO356_12525 -5.2 -7.2 acetylglutamate kinase compare
AO356_09815 -5.2 -6.2 imidazoleglycerol-phosphate dehydratase compare
AO356_21465 -5.2 -3.6 amidophosphoribosyltransferase compare
AO356_08635 -5.1 -7.7 ATP phosphoribosyltransferase regulatory subunit compare
AO356_09810 -5.0 -3.5 imidazole glycerol phosphate synthase subunit HisH compare
AO356_21440 -5.0 -8.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO356_09520 -5.0 -4.8 phosphoribosyl-AMP cyclohydrolase compare
AO356_14435 -4.9 -5.8 anthranilate phosphoribosyltransferase compare
AO356_19090 -4.9 -3.4 phosphoribosylaminoimidazole synthetase compare
AO356_09800 -4.8 -3.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO356_13085 -4.8 -10.8 N-acetylglutamate synthase compare
AO356_18275 -4.8 -12.0 ornithine carbamoyltransferase compare
AO356_09725 -4.7 -8.5 histidine kinase compare
AO356_20830 -4.7 -4.6 phosphoadenosine phosphosulfate reductase compare
AO356_06965 -4.7 -7.8 histidinol dehydrogenase compare
AO356_10915 -4.7 -10.4 tryptophan synthase subunit beta compare
AO356_01570 -4.5 -5.4 hydroxymethylglutaryl-CoA lyase compare
AO356_13405 -4.5 -10.5 methionine biosynthesis protein MetW compare
AO356_15165 -4.5 -3.1 protein cII compare
AO356_06970 -4.4 -6.9 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO356_13410 -4.4 -13.2 homoserine O-acetyltransferase compare
AO356_12520 -4.4 -3.0 orotate phosphoribosyltransferase compare
AO356_14420 -4.3 -14.7 anthranilate synthase compare
AO356_10000 -4.3 -5.8 hypothetical protein compare
AO356_10910 -4.2 -9.0 tryptophan synthase subunit alpha compare
AO356_07055 -4.2 -2.9 phosphocarrier protein HPr compare
AO356_22970 -4.2 -8.3 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) conserved
AO356_06050 -4.1 -13.7 protein-PII uridylyltransferase compare
AO356_10350 -4.1 -15.1 phosphoenolpyruvate-protein phosphotransferase compare
AO356_12780 -4.0 -9.0 argininosuccinate lyase compare
AO356_16075 -4.0 -3.8 Fis family transcriptional regulator compare
AO356_19795 -3.9 -2.7 glycerol-3-phosphate dehydrogenase compare
AO356_03385 -3.9 -6.4 imidazole glycerol phosphate synthase subunit HisH compare
AO356_02175 -3.8 -8.4 transaldolase compare
AO356_14430 -3.8 -9.4 anthranilate synthase compare
AO356_08930 -3.7 -3.5 heptose kinase compare
AO356_13250 -3.6 -10.9 dihydroxy-acid dehydratase compare
AO356_14440 -3.6 -4.8 indole-3-glycerol-phosphate synthase compare
AO356_16600 -3.6 -3.4 malate:quinone oxidoreductase compare
AO356_17520 -3.5 -2.4 phosphoribosylformylglycinamidine synthase compare
AO356_16050 -3.4 -2.3 glucose-6-phosphate isomerase compare
AO356_08735 -3.3 -13.9 phosphoserine phosphatase compare
AO356_09795 -3.2 -2.2 imidazole glycerol phosphate synthase subunit HisF compare
AO356_16750 -3.2 -9.1 antibiotic biosynthesis monooxygenase compare
AO356_21470 -3.2 -7.1 O-succinylhomoserine sulfhydrylase compare
AO356_14135 -3.2 -15.1 biotin synthase compare
AO356_16180 -3.1 -12.4 ketol-acid reductoisomerase compare
AO356_12020 -3.1 -14.3 pyruvate carboxylase subunit A compare
AO356_16170 -3.0 -11.9 acetolactate synthase 3 catalytic subunit compare
AO356_10005 -3.0 -10.5 branched-chain amino acid permease (azaleucine resistance) compare
AO356_03375 -2.9 -2.8 ExsB family protein compare
AO356_02325 -2.9 -3.9 3-ketoacyl-CoA thiolase compare
AO356_16095 -2.9 -9.2 molecular chaperone DnaK compare
AO356_03415 -2.8 -10.7 oxidoreductase compare
AO356_11315 -2.8 -1.9 shikimate dehydrogenase compare
AO356_12025 -2.7 -12.5 pyruvate carboxylase subunit B compare
AO356_18025 -2.7 -3.1 ATP-dependent DNA helicase RuvB compare
AO356_07915 -2.6 -2.5 exodeoxyribonuclease V subunit beta compare
AO356_03350 -2.6 -8.3 glycosyl transferase compare
AO356_10340 -2.6 -12.2 phosphoserine phosphatase compare
AO356_10300 -2.6 -3.0 3-phosphoglycerate dehydrogenase compare
AO356_03355 -2.6 -5.9 hypothetical protein compare
AO356_09525 -2.6 -6.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO356_08895 -2.6 -3.0 GlcNAc-PI de-N-acetylase compare
AO356_01750 -2.5 -4.7 ATP-dependent Clp protease proteolytic subunit compare
AO356_03345 -2.5 -11.1 hypothetical protein compare
AO356_03405 -2.5 -5.0 serine acetyltransferase compare
AO356_01740 -2.5 -4.3 DNA-binding protein compare
AO356_01745 -2.4 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_11585 -2.4 -5.9 lipid A biosynthesis lauroyl acyltransferase compare
AO356_12015 -2.4 -9.0 LysR family transcriptional regulator compare
AO356_03380 -2.4 -6.0 glycosyl amidation-associated protein WbuZ compare
AO356_17830 -2.3 -6.2 pyruvate kinase compare
AO356_10345 -2.3 -6.0 RNA pyrophosphohydrolase compare
AO356_03400 -2.3 -7.0 aminotransferase DegT compare
AO356_21330 -2.3 -10.5 aromatic amino acid aminotransferase compare
AO356_01255 -2.3 -11.1 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase compare
AO356_00520 -2.3 -3.0 cobalt transporter compare
AO356_01245 -2.2 -9.4 glycogen branching protein compare
AO356_03360 -2.2 -4.1 hypothetical protein compare
AO356_02290 -2.2 -3.9 TetR family transcriptional regulator compare
AO356_12735 -2.1 -2.9 diaminopimelate epimerase compare
AO356_13605 -2.1 -9.4 5,10-methylenetetrahydrofolate reductase compare
AO356_19085 -2.1 -8.0 phosphoribosylglycinamide formyltransferase compare
AO356_10075 -2.0 -6.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO356_18020 -2.0 -3.5 ATP-dependent DNA helicase RuvA compare
AO356_03365 -2.0 -4.3 UDP-N-acetylglucosamine 2-epimerase compare
AO356_12895 -1.9 -15.4 polyphosphate kinase compare
AO356_06005 -1.9 -4.7 zinc metallopeptidase RseP compare
AO356_05160 -1.9 -6.3 glucose-6-phosphate dehydrogenase compare
AO356_24485 -1.9 -3.4 SAM-dependent methyltransferase compare
AO356_20475 -1.9 -3.2 hypothetical protein compare
AO356_19520 -1.8 -4.7 isochorismatase compare
AO356_01555 -1.8 -8.3 acyl-CoA dehydrogenase compare
AO356_07480 -1.8 -3.5 carbamoyl phosphate synthase large subunit compare
AO356_17395 -1.8 -4.9 glutamine ABC transporter ATP-binding protein compare
AO356_03420 -1.8 -8.6 UDP-N-acetyl-D-glucosamine dehydrogenase compare
AO356_03800 -1.7 -1.9 histidine kinase compare
AO356_16080 -1.7 -10.7 ATPase compare
AO356_03810 -1.7 -3.9 anti-anti-sigma factor compare
AO356_11025 -1.7 -4.1 transcriptional regulator PhoU compare
AO356_16060 -1.7 -4.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
AO356_19060 -1.7 -11.3 (p)ppGpp synthetase compare
AO356_06960 -1.7 -6.4 histidinol-phosphate aminotransferase compare
AO356_08235 -1.7 -7.4 histidine kinase compare
AO356_18730 -1.7 -7.1 arginine N-succinyltransferase compare
AO356_22995 -1.7 -4.0 ArsR family transcriptional regulator compare
AO356_19425 -1.7 -2.4 lipid A biosynthesis lauroyl acyltransferase compare
AO356_12375 -1.6 -9.1 histidine kinase compare
AO356_22980 -1.6 -3.4 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
AO356_16175 -1.6 -5.9 acetolactate synthase 3 regulatory subunit compare
AO356_08870 -1.6 -7.9 polymerase compare
AO356_07910 -1.6 -1.8 exodeoxyribonuclease V subunit alpha compare
AO356_14335 -1.6 -4.0 rRNA methyltransferase compare
AO356_08490 -1.6 -11.0 branched-chain amino acid ABC transporter permease conserved
AO356_11680 -1.5 -2.7 chromosome partitioning protein ParB compare
AO356_20880 -1.5 -2.9 3-methylitaconate isomerase compare
AO356_08480 -1.5 -8.5 ABC transporter ATP-binding protein conserved
AO356_11820 -1.5 -9.1 sugar ABC transporter ATP-binding protein compare
AO356_08975 -1.5 -9.6 diguanylate cyclase compare
AO356_27180 -1.5 -4.2 hypothetical protein compare
AO356_22985 -1.5 -7.3 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) conserved
AO356_14150 -1.5 -7.5 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO356_16435 -1.5 -2.7 hypothetical protein compare
AO356_14140 -1.5 -8.5 8-amino-7-oxononanoate synthase compare
AO356_08485 -1.5 -7.7 ABC transporter ATP-binding protein compare
AO356_12380 -1.5 -6.4 ATP-dependent DNA helicase RecG compare
AO356_08495 -1.5 -10.4 branched-chain amino acid transporter permease subunit LivH conserved
AO356_08525 -1.5 -6.2 NAD synthetase compare
AO356_04560 -1.5 -2.7 serine peptidase compare
AO356_00555 -1.5 -8.0 sulfite reductase compare
AO356_17390 -1.4 -8.7 amino acid ABC transporter permease compare
AO356_05225 -1.4 -4.6 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_14145 -1.4 -4.7 transporter compare
AO356_17385 -1.4 -8.9 amino acid ABC transporter permease compare
AO356_22990 -1.4 -6.4 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) conserved
AO356_09540 -1.4 -1.7 twin-arginine protein translocation system subunit TatC compare
AO356_08500 -1.4 -10.8 amino acid ABC transporter substrate-binding protein compare
AO356_10585 -1.4 -8.5 hypothetical protein compare
AO356_19840 -1.4 -4.7 histidine kinase compare
AO356_24540 -1.4 -4.7 serine/threonine protein phosphatase compare
AO356_19745 -1.4 -7.6 heat-shock protein Hsp90 compare
AO356_20800 -1.3 -1.8 hypothetical protein compare
AO356_12605 -1.3 -7.1 FAD-dependent oxidoreductase compare
AO356_21275 -1.3 -1.7 peptidase compare
AO356_00455 -1.3 -5.4 IclR family transcriptional regulator compare
AO356_00560 -1.3 -2.7 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
AO356_13570 -1.3 -7.4 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO356_12005 -1.3 -7.6 transcriptional regulator compare
AO356_05010 -1.3 -7.7 diguanylate cyclase compare
AO356_07920 -1.3 -4.6 exodeoxyribonuclease V subunit gamma compare
AO356_20470 -1.3 -1.8 hypothetical protein compare
AO356_18805 -1.3 -2.0 magnesium transporter compare
AO356_07020 -1.3 -1.9 LPS export ABC transporter periplasmic protein LptC compare
AO356_22795 -1.3 -2.1 UTP--glucose-1-phosphate uridylyltransferase compare
AO356_07495 -1.2 -3.5 molecular chaperone DnaJ compare
AO356_18970 -1.2 -6.2 histidine kinase compare
AO356_07385 -1.2 -1.3 tRNA-Thr compare
AO356_08875 -1.2 -2.3 toluene tolerance protein compare
AO356_18720 -1.2 -6.6 AraC family transcriptional regulator compare
AO356_17380 -1.2 -8.0 amino acid ABC transporter substrate-binding protein compare
AO356_18725 -1.2 -4.5 acetylornithine aminotransferase compare
AO356_08905 -1.2 -3.3 glycosyl transferase compare
AO356_12900 -1.2 -3.4 exopolyphosphatase compare
AO356_00355 -1.2 -6.4 chemotaxis protein CheY compare
AO356_06580 -1.1 -2.8 GTP-binding protein compare
AO356_11610 -1.1 -2.0 glycerol acyltransferase compare
AO356_11465 -1.1 -6.0 DNA polymerase I compare
AO356_21460 -1.1 -2.5 colicin V production CvpA compare
AO356_24645 -1.1 -3.9 hypothetical protein compare
AO356_21705 -1.1 -2.3 response regulator compare
AO356_11825 -1.1 -5.2 ABC transporter compare
AO356_17985 -1.1 -4.0 cold-shock protein compare
AO356_14155 -1.1 -3.7 dethiobiotin synthetase compare
AO356_00605 -1.1 -3.4 TetR family transcriptional regulator compare
AO356_29515 -1.0 -1.7 energy transducer TonB compare
AO356_26285 -1.0 -1.7 sugar ABC transporter substrate-binding protein compare
AO356_19285 -1.0 -1.4 tRNA-Asp compare
AO356_06385 -1.0 -1.6 recombinase XerD compare
AO356_12730 -1.0 -2.8 hypothetical protein compare
AO356_12725 -1.0 -3.1 recombinase XerC compare
AO356_05060 -1.0 -2.2 gluconokinase compare
AO356_03870 -1.0 -6.6 flagellar hook protein FliD compare
AO356_22975 -1.0 -4.2 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) compare
AO356_03500 -1.0 -2.9 3-oxoacyl-ACP reductase compare
AO356_05330 -1.0 -5.2 leucine/isoleucine/valine transporter permease subunit compare
AO356_28110 -1.0 -5.6 ATPase compare
AO356_07050 -0.9 -5.3 glmZ(sRNA)-inactivating NTPase compare
AO356_01590 -0.9 -3.6 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) compare
AO356_01595 -0.9 -4.9 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) compare
AO356_17075 -0.9 -2.1 cytochrome C compare
AO356_27550 -0.9 -1.8 3-oxoacyl-ACP synthase compare
AO356_12885 -0.9 -4.1 hypothetical protein compare
AO356_27585 -0.9 -3.4 AcrR family transcriptional regulator compare
AO356_06065 -0.9 -2.0 ArsC family transcriptional regulator compare
AO356_03900 -0.9 -5.9 flagellar biosynthesis protein FlgL compare
AO356_14050 -0.9 -1.3 glutathione S-transferase compare


Specific Phenotypes

For 17 genes in this experiment

For nitrogen source L-Leucine in Pseudomonas fluorescens FW300-N2C3

For nitrogen source L-Leucine across organisms