Experiment set5IT085 for Pseudomonas fluorescens FW300-N2C3

Compare to:

L-Leucine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
AO356_26135 +5.9 40.0 AraC family transcriptional regulator conserved
AO356_26140 +5.8 27.3 lysine transporter LysE compare
AO356_11055 +5.6 24.4 long-chain acyl-CoA thioester hydrolase compare
AO356_12515 +5.5 28.4 exodeoxyribonuclease III compare
AO356_09015 +4.2 37.0 transcriptional regulator compare
AO356_01015 +3.1 11.4 peptidylprolyl isomerase compare
AO356_19230 +3.0 17.7 TetR family transcriptional regulator compare
AO356_24965 +2.6 9.2 GntR family transcriptional regulator compare
AO356_17890 +1.7 4.2 H-NS histone compare
AO356_06990 +1.6 8.6 toluene tolerance protein compare
AO356_02190 +1.6 10.1 hypothetical protein compare
AO356_08645 +1.6 9.4 hypothetical protein compare
AO356_16890 +1.6 8.2 hypothetical protein compare
AO356_07000 +1.5 3.8 ABC transporter permease compare
AO356_12715 +1.5 8.5 hypothetical protein compare
AO356_05995 +1.4 3.5 hypothetical protein compare
AO356_06995 +1.4 8.1 outer membrane lipid asymmetry maintenance protein MlaD compare
AO356_15735 +1.4 9.8 ABC transporter ATP-binding protein compare
AO356_23850 +1.3 6.0 histidine kinase compare
AO356_13485 +1.3 3.9 chemotaxis protein CheY compare
AO356_08640 +1.3 5.9 membrane protease HflC compare
AO356_18245 +1.2 6.5 DeoR family transcriptional regulator compare
AO356_29855 +1.2 2.1 hypothetical protein compare
AO356_09780 +1.2 6.7 peptidase S41 compare
AO356_20345 +1.1 9.8 GntR family transcriptional regulator compare
AO356_12625 +1.1 2.7 cytochrome C2 compare
AO356_30005 +1.1 6.0 diguanylate cyclase compare
AO356_24450 +1.1 4.2 microcin ABC transporter ATP-binding protein compare
AO356_02825 +1.0 8.6 phosphoenolpyruvate synthase compare
AO356_09765 +1.0 2.2 sulfurtransferase compare
AO356_14910 +1.0 7.4 thioredoxin compare
AO356_20175 +1.0 2.1 3-oxoacyl-ACP synthase compare
AO356_07005 +1.0 2.4 ABC transporter ATP-binding protein compare
AO356_10310 +1.0 7.5 hypothetical protein compare
AO356_15160 +1.0 2.8 hypothetical protein compare
AO356_25225 +1.0 2.0 peptidylprolyl isomerase compare
AO356_16485 +1.0 6.5 hypothetical protein compare
AO356_21315 +0.9 4.1 hypothetical protein compare
AO356_06615 +0.9 1.8 FeS assembly protein IscX compare
AO356_13210 +0.9 5.9 hypothetical protein compare
AO356_03245 +0.9 2.6 hypothetical protein compare
AO356_07540 +0.9 2.0 SsrA-binding protein compare
AO356_29025 +0.9 1.7 hypothetical protein compare
AO356_09560 +0.9 7.2 glucosyltransferase MdoH compare
AO356_21835 +0.8 1.9 glyoxalase compare
AO356_21320 +0.8 1.4 tRNA-Asn compare
AO356_08980 +0.8 6.0 peptide methionine sulfoxide reductase compare
AO356_28090 +0.8 1.7 ABC transporter ATP-binding protein compare
AO356_28510 +0.8 2.6 xylose transporter compare
AO356_10445 +0.8 2.5 serine protease compare
AO356_15140 +0.8 2.1 homoserine dehydrogenase compare
AO356_23040 +0.8 3.6 aldose epimerase compare
AO356_21310 +0.8 2.3 filamentous hemagglutinin compare
AO356_22870 +0.8 3.4 glycerate kinase compare
AO356_02105 +0.8 1.8 hypothetical protein compare
AO356_05440 +0.8 2.2 hypothetical protein compare
AO356_13295 +0.8 3.0 twin-arginine translocation pathway signal protein compare
AO356_15420 +0.8 3.1 hypothetical protein compare
AO356_18780 +0.7 0.9 carbon storage regulator compare
AO356_04055 +0.7 2.1 hypothetical protein compare
AO356_15465 +0.7 4.9 AsnC family transcriptional regulator compare
AO356_15925 +0.7 3.9 ribosomal large subunit pseudouridine synthase D compare
AO356_02315 +0.7 3.2 DNA topoisomerase I compare
AO356_17970 +0.7 6.5 porin compare
AO356_20450 +0.7 3.5 hypothetical protein compare
AO356_15295 +0.7 2.3 nicotinate-nucleotide adenylyltransferase compare
AO356_10185 +0.7 4.7 glutamate--cysteine ligase compare
AO356_10575 +0.7 2.2 tryptophan synthase subunit beta compare
AO356_08910 +0.7 2.2 carbamoyltransferase compare
AO356_08585 +0.7 2.5 50S ribosomal protein L9 compare
AO356_06550 +0.7 5.2 2-isopropylmalate synthase compare
AO356_09565 +0.7 4.3 glucan biosynthesis protein G compare
AO356_07995 +0.7 2.4 MerR family transcriptional regulator compare
AO356_22405 +0.7 1.6 hypothetical protein compare
AO356_16820 +0.7 2.2 IclR family transcriptional regulator compare
AO356_06105 +0.7 1.1 cold-shock protein compare
AO356_21765 +0.7 1.5 GntR family transcriptional regulator compare
AO356_01840 +0.6 1.1 uracil permease compare
AO356_27765 +0.6 1.8 hypothetical protein compare
AO356_12925 +0.6 1.4 GntR family transcriptional regulator compare
AO356_26910 +0.6 1.8 hypothetical protein compare
AO356_26475 +0.6 1.6 lactoylglutathione lyase compare
AO356_06685 +0.6 1.2 preprotein translocase subunit YajC compare
AO356_28105 +0.6 1.9 LuxR family transcriptional regulator compare
AO356_22585 +0.6 1.7 MerR family transcriptional regulator compare
AO356_03855 +0.6 4.7 AAA family ATPase compare
AO356_26030 +0.6 2.7 hydroxyacid dehydrogenase compare
AO356_23435 +0.6 2.4 hypothetical protein compare
AO356_25720 +0.6 1.6 polyamine ABC transporter permease compare
AO356_24410 +0.6 2.1 alanine acetyltransferase compare
AO356_28995 +0.6 1.9 ABC transporter ATP-binding protein compare
AO356_28440 +0.6 1.1 galactose 1-dehydrogenase compare
AO356_16740 +0.6 4.5 GTP cyclohydrolase compare
AO356_17345 +0.6 1.8 molybdenum cofactor biosynthesis protein MoaE compare
AO356_17575 +0.6 1.5 hypothetical protein compare
AO356_07300 +0.6 3.1 choline ABC transporter permease compare
AO356_15330 +0.6 2.5 D-alanyl-D-alanine carboxypeptidase compare
AO356_08445 +0.6 3.0 TetR family transcriptional regulator compare
AO356_01630 +0.6 3.0 anti-sigma factor compare
AO356_12635 +0.6 3.9 XRE family transcriptional regulator compare
AO356_19780 +0.6 4.2 histidine kinase compare
AO356_19315 +0.6 2.2 hypothetical protein compare
AO356_12650 +0.6 2.1 xanthine phosphoribosyltransferase compare
AO356_24770 +0.6 2.3 type II secretion system protein GspG compare
AO356_26895 +0.6 1.7 2Fe-2S ferredoxin compare
AO356_13890 +0.6 2.2 hypothetical protein compare
AO356_00415 +0.6 2.7 transporter compare
AO356_25865 +0.6 1.1 peroxidase compare
AO356_04545 +0.5 4.4 permease compare
AO356_16185 +0.5 2.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
AO356_15305 +0.5 1.9 50S rRNA methyltransferase compare
AO356_09760 +0.5 2.2 glutaredoxin compare
AO356_10155 +0.5 2.9 ribosomal protein S6 modification protein compare
AO356_24755 +0.5 1.1 type II secretion system protein GspH compare
AO356_02210 +0.5 1.6 copper-binding protein compare
AO356_15260 +0.5 1.0 dehydratase compare
AO356_26915 +0.5 1.5 Fe-S oxidoreductase compare
AO356_23095 +0.5 3.2 Dihydropyrimidinase (EC 3.5.2.2) (from data) compare
AO356_29790 +0.5 1.6 ABC transporter permease compare
AO356_01250 +0.5 4.4 alpha-amylase compare
AO356_25160 +0.5 3.1 protease compare
AO356_02905 +0.5 3.7 amino acid ABC transporter substrate-binding protein compare
AO356_17400 +0.5 1.8 transcriptional regulator compare
AO356_26240 +0.5 2.8 protein TolR compare
AO356_29780 +0.5 2.0 sarcosine oxidase subunit beta compare
AO356_26595 +0.5 2.2 antibiotic biosynthesis monooxygenase compare
AO356_07665 +0.5 2.1 hypothetical protein compare
AO356_01915 +0.5 1.3 hypothetical protein compare
AO356_15410 +0.5 3.0 (dimethylallyl)adenosine tRNA methylthiotransferase compare
AO356_24380 +0.5 1.9 hydroxyacid dehydrogenase compare
AO356_17085 +0.5 2.8 peptidase compare
AO356_15645 +0.5 2.8 ubiquinol oxidase subunit II compare
AO356_25120 +0.5 1.3 hypothetical protein compare
AO356_28675 +0.5 1.2 glycosyl hydrolase compare
AO356_20210 +0.5 3.3 TetR family transcriptional regulator compare
AO356_18735 +0.5 1.8 arginine N-succinyltransferase compare
AO356_26220 +0.5 1.5 diguanylate cyclase compare
AO356_08215 +0.5 2.9 tRNA-dihydrouridine synthase B compare
AO356_15440 +0.5 4.6 histidine kinase compare
AO356_14375 +0.5 3.5 histidine kinase compare
AO356_08375 +0.5 1.1 acetyltransferase compare
AO356_15050 +0.5 1.3 phage shock protein A compare
AO356_10485 +0.5 1.1 hypothetical protein compare
AO356_02620 +0.5 2.5 hypothetical protein compare
AO356_25580 +0.5 1.7 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
AO356_20265 +0.5 1.8 hypothetical protein compare
AO356_08985 +0.5 0.7 hypothetical protein compare
AO356_11050 +0.5 4.0 MFS transporter compare
AO356_03205 +0.5 3.5 acetyltransferase compare
AO356_22590 +0.5 2.2 2,4-dienoyl-CoA reductase compare
AO356_08670 +0.5 0.6 N-acetylmuramoyl-L-alanine amidase compare
AO356_23420 +0.5 2.8 carboxynorspermidine decarboxylase compare
AO356_21610 +0.5 2.2 ABC transporter ATP-binding protein compare
AO356_01515 +0.5 2.0 N-formylglutamate amidohydrolase compare
AO356_11355 +0.5 3.7 hypothetical protein compare
AO356_10555 +0.5 3.7 hemolysin secretion protein D compare
AO356_23425 +0.5 1.8 saccharopine dehydrogenase compare
AO356_05025 +0.5 2.0 dehydrogenase compare
AO356_19310 +0.5 2.9 Cro/Cl family transcriptional regulator compare
AO356_14385 +0.5 2.6 spermidine/putrescine ABC transporter ATP-binding protein compare
AO356_04920 +0.5 2.2 protocatechuate 3,4-dioxygenase compare
AO356_28460 +0.5 1.7 short-chain dehydrogenase compare
AO356_01410 +0.5 1.2 hypothetical protein compare
AO356_03115 +0.4 3.3 spermidine synthase compare
AO356_00135 +0.4 2.6 hypothetical protein compare
AO356_15525 +0.4 3.8 hypothetical protein compare
AO356_02750 +0.4 2.7 nitrate transporter compare
AO356_24990 +0.4 1.3 4-oxalocrotonate tautomerase compare
AO356_10720 +0.4 3.2 succinate-semialdehyde dehydrogenase compare
AO356_20025 +0.4 2.4 dehydrogenase compare
AO356_10560 +0.4 3.6 ABC transporter compare
AO356_12820 +0.4 2.5 transcriptional regulator compare
AO356_20140 +0.4 2.5 septum formation inhibitor Maf compare
AO356_27560 +0.4 2.0 hypothetical protein compare
AO356_02215 +0.4 1.6 transcriptional regulator compare
AO356_11495 +0.4 2.3 hypothetical protein compare
AO356_12265 +0.4 2.3 hypothetical protein compare
AO356_09185 +0.4 0.8 hypothetical protein compare
AO356_29415 +0.4 1.4 transketolase compare
AO356_21365 +0.4 2.0 TetR family transcriptional regulator compare
AO356_30080 +0.4 0.7 amidophosphoribosyltransferase compare
AO356_21370 +0.4 1.7 hydrolase compare
AO356_16685 +0.4 1.9 pressure-regulated protein compare
AO356_10145 +0.4 0.9 molecular chaperone Hsp33 compare
AO356_09685 +0.4 3.4 maltodextrin phosphorylase compare
AO356_26650 +0.4 1.7 4-chlorobenzoate--CoA ligase compare
AO356_01895 +0.4 1.4 AraC family transcriptional regulator compare
AO356_22750 +0.4 1.6 transcriptional regulator compare
AO356_28515 +0.4 1.2 sugar ABC transporter permease compare
AO356_07080 +0.4 1.4 FagA protein compare
AO356_17915 +0.4 2.1 ATP-binding protein compare
AO356_01265 +0.4 2.1 hypothetical protein compare
AO356_09355 +0.4 1.7 cytochrome B compare
AO356_03495 +0.4 1.7 phosphoglycolate phosphatase compare
AO356_18130 +0.4 1.5 copper resistance protein CopC compare
AO356_09555 +0.4 1.7 hypothetical protein compare
AO356_08290 +0.4 1.5 precorrin-6Y C5,15-methyltransferase compare
AO356_04325 +0.4 1.3 allophanate hydrolase compare
AO356_05460 +0.4 3.0 hypothetical protein compare
AO356_16920 +0.4 2.0 hypothetical protein compare


Specific Phenotypes

For 17 genes in this experiment

For nitrogen source L-Leucine in Pseudomonas fluorescens FW300-N2C3

For nitrogen source L-Leucine across organisms