Experiment set5IT085 for Pantoea sp. MT58
Survival; Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
Group: survivalMedia: + Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
Culturing: MT058_ML2, tube, Aerobic, at 30 (C)
By: Mike Thorgersen on 09/21/2021
Specific Phenotypes
For 3 genes in this experiment
For survival Treatment=GW247 (pH 5.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| D-Tagatose and Galactitol Utilization | 1 |
| Nitrate and nitrite ammonification | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Glycolysis / Gluconeogenesis
- Fructose and mannose metabolism
- Galactose metabolism
- Ascorbate and aldarate metabolism
- Starch and sucrose metabolism
- Nucleotide sugars metabolism
- Aminosugars metabolism
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| galactitol degradation | 5 | 4 | 1 |
| nitrate reduction VII (denitrification) | 5 | 2 | 1 |
| nitrate reduction I (denitrification) | 5 | 2 | 1 |
| superpathway of hexitol degradation (bacteria) | 18 | 16 | 1 |