Experiment set5IT081 for Vibrio cholerae E7946 ATCC 55056

Compare to:

LB_Aerobic_180MIN_ZN14B

200 most detrimental genes:

  gene name fitness t score description  
CSW01_08070 +1.3 1.8 hypothetical protein compare
CSW01_06380 +1.2 0.8 GTP cyclohydrolase II compare
CSW01_18685 +1.0 1.4 heme utilization cystosolic carrier protein HutX compare
CSW01_17750 +1.0 1.3 cytochrome B compare
CSW01_14875 +0.9 2.0 chromosome partitioning protein ParA compare
CSW01_10655 +0.9 3.0 flagellar hook-basal body complex protein FliE compare
CSW01_13445 +0.9 1.3 elongation factor P compare
CSW01_10605 +0.9 1.9 flagellar motor switch protein FliN compare
CSW01_16690 +0.8 1.6 type II toxin-antitoxin system RelE/ParE family toxin compare
CSW01_10035 +0.8 1.7 YnhF family membrane protein compare
CSW01_08520 +0.8 2.0 hypothetical protein compare
CSW01_10745 +0.8 1.6 DUF2897 domain-containing protein compare
CSW01_10630 +0.7 3.1 flagella biosynthesis chaperone FliJ compare
CSW01_00110 +0.7 2.8 hypothetical protein compare
CSW01_05015 +0.7 2.3 selenoprotein W-like protein compare
CSW01_18560 +0.7 0.8 hypothetical protein compare
CSW01_16655 +0.7 3.2 hypothetical protein compare
CSW01_06375 +0.7 1.8 hypothetical protein compare
CSW01_04495 +0.7 1.7 hypothetical protein compare
CSW01_07135 +0.6 2.6 chromosome partitioning protein ParA compare
CSW01_08175 +0.6 2.1 hypothetical protein compare
CSW01_06035 +0.6 0.7 hypothetical protein compare
CSW01_18840 +0.6 2.8 hypothetical protein compare
CSW01_16585 +0.6 1.0 acetyltransferase compare
CSW01_07475 +0.6 1.5 glutaredoxin family protein compare
CSW01_01325 +0.6 2.3 acetyltransferase compare
CSW01_10500 +0.6 2.7 CidA/LrgA family protein compare
CSW01_09440 +0.6 2.2 PilZ domain-containing protein compare
CSW01_02155 +0.6 3.5 MSHA pilin protein MshA compare
CSW01_10600 +0.6 2.8 flagellar biosynthetic protein FliO compare
CSW01_17830 +0.6 1.1 hypothetical protein compare
CSW01_10300 +0.6 2.7 chemotaxis protein CheW compare
CSW01_11250 +0.6 3.0 molecular chaperone compare
CSW01_05225 +0.6 1.3 molybdopterin synthase sulfur carrier subunit compare
CSW01_18555 +0.6 2.3 hypothetical protein compare
CSW01_12755 +0.6 1.2 anti-sigma B factor antagonist compare
CSW01_17395 +0.6 2.1 hypothetical protein compare
CSW01_19210 +0.6 1.1 DUF3081 domain-containing protein compare
CSW01_06235 +0.6 1.2 hypothetical protein compare
CSW01_16275 +0.6 1.7 hypothetical protein compare
CSW01_15585 +0.6 1.8 DUF645 domain-containing protein compare
CSW01_07900 +0.6 2.6 hypothetical protein compare
CSW01_10080 +0.5 2.4 4-amino-4-deoxychorismate lyase compare
CSW01_07580 +0.5 0.9 hypothetical protein compare
CSW01_03815 +0.5 2.8 peroxidase compare
CSW01_11195 +0.5 3.0 flagellar L-ring protein compare
CSW01_15975 +0.5 2.8 nitrate reductase compare
CSW01_15595 +0.5 0.8 hypothetical protein compare
CSW01_02790 +0.5 1.2 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase compare
CSW01_18890 +0.5 2.0 peptidyl-prolyl cis-trans isomerase compare
CSW01_03070 +0.5 1.3 hemolysin compare
CSW01_10345 +0.5 3.6 flagellar biosynthesis protein FlhF compare
CSW01_05640 +0.5 1.6 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA compare
CSW01_10660 +0.5 4.2 sigma-54-dependent Fis family transcriptional regulator compare
CSW01_15425 +0.5 1.0 DUF3265 domain-containing protein compare
CSW01_04580 +0.5 3.1 flagellar motor protein MotB compare
CSW01_10670 +0.5 3.3 sigma-54-dependent Fis family transcriptional regulator compare
CSW01_15860 +0.5 1.0 DUF645 domain-containing protein compare
CSW01_18360 +0.5 1.9 hypothetical protein compare
CSW01_16940 +0.5 2.4 LysR family transcriptional regulator compare
CSW01_18230 +0.5 2.3 agmatinase compare
CSW01_15695 +0.5 1.4 DUF3265 domain-containing protein compare
CSW01_03655 +0.5 3.6 murein transglycosylase compare
CSW01_02150 +0.5 3.1 MSHA biogenesis protein MshB compare
CSW01_11265 +0.5 3.9 flagellar basal-body protein compare
CSW01_06805 +0.5 1.1 peroxiredoxin compare
CSW01_18870 +0.5 2.1 transcriptional regulator compare
CSW01_03970 +0.5 3.1 DNA ligase compare
CSW01_16900 +0.5 1.0 twin-arginine translocase TatA/TatE family subunit compare
CSW01_16910 +0.5 1.4 hypothetical protein compare
CSW01_11190 +0.4 2.7 flagellar P-ring protein compare
CSW01_11095 +0.4 2.1 DUF262 domain-containing protein compare
CSW01_18285 +0.4 1.2 4a-hydroxytetrahydrobiopterin dehydratase compare
CSW01_10595 +0.4 2.9 flagellar biosynthetic protein FliP compare
CSW01_00515 +0.4 1.5 hypothetical protein compare
CSW01_14690 +0.4 2.1 Crp/Fnr family transcriptional regulator compare
CSW01_03100 +0.4 2.8 TetR/AcrR family transcriptional regulator compare
CSW01_14280 +0.4 1.5 DUF3302 domain-containing protein compare
CSW01_15210 +0.4 2.4 L-ascorbate 6-phosphate lactonase compare
CSW01_10335 +0.4 2.7 RNA polymerase sigma factor FliA compare
CSW01_10640 +0.4 3.2 flagellar assembly protein FliH compare
CSW01_12780 +0.4 1.8 hypothetical protein compare
CSW01_02160 +0.4 3.1 MSHA pilin protein MshC compare
CSW01_17675 +0.4 2.8 GGDEF domain-containing protein compare
CSW01_10650 +0.4 3.6 flagellar basal body M-ring protein FliF compare
CSW01_18725 +0.4 1.4 TetR/AcrR family transcriptional regulator compare
CSW01_08495 +0.4 1.8 hypothetical protein compare
CSW01_07445 +0.4 1.7 macrodomain Ter protein MatP compare
CSW01_12610 +0.4 1.2 3-isopropylmalate dehydratase small subunit compare
CSW01_15100 +0.4 1.9 hypothetical protein compare
CSW01_10665 +0.4 3.5 PAS domain-containing sensor histidine kinase compare
CSW01_18730 +0.4 1.0 DUF406 domain-containing protein compare
CSW01_18835 +0.4 1.2 acyl-CoA thioesterase compare
CSW01_16470 +0.4 1.5 DUF645 domain-containing protein compare
CSW01_10680 +0.4 1.8 flagellar protein FliT compare
CSW01_05010 +0.4 2.4 phosphodiesterase compare
CSW01_19510 +0.4 1.5 anti-sigma factor antagonist compare
CSW01_02170 +0.4 3.4 type II secretion system protein compare
CSW01_02110 +0.4 2.6 MSHA biogenesis protein MshJ compare
CSW01_02115 +0.4 2.6 MSHA biogenesis protein MshK compare
CSW01_07240 +0.4 2.9 histidine kinase compare
CSW01_02140 +0.4 3.3 type II secretion system F family protein compare
CSW01_11200 +0.4 2.7 flagellar basal-body rod protein FlgG compare
CSW01_16250 +0.4 1.5 C4-dicarboxylate ABC transporter compare
CSW01_19125 +0.4 0.9 branched-chain amino acid ABC transporter compare
CSW01_17745 +0.4 1.3 diacylglycerol kinase compare
CSW01_10635 +0.4 2.8 flagellum-specific ATP synthase FliI compare
CSW01_06535 +0.4 1.0 hypothetical protein compare
CSW01_10350 +0.4 3.2 flagellar biosynthesis protein FlhA compare
CSW01_02175 +0.4 2.9 MSHA biogenesis protein MshP compare
CSW01_09940 +0.4 2.5 formyltetrahydrofolate deformylase compare
CSW01_09295 +0.4 2.0 hypothetical protein compare
CSW01_17320 +0.4 1.5 hypothetical protein compare
CSW01_11205 +0.4 2.6 flagellar basal-body rod protein FlgF compare
CSW01_11420 +0.4 1.2 cytochrome C biogenesis protein CcsB compare
CSW01_12500 +0.4 1.9 hypothetical protein compare
CSW01_02180 +0.4 3.6 MSHA biogenesis protein MshQ compare
CSW01_12730 +0.4 2.0 aspartate carbamoyltransferase regulatory subunit compare
CSW01_12200 +0.4 0.9 ribosomal RNA small subunit methyltransferase H compare
CSW01_09990 +0.4 0.9 hypothetical protein compare
CSW01_06425 +0.4 1.8 hypothetical protein compare
CSW01_18010 +0.4 1.2 cytochrome C554 compare
CSW01_02105 +0.4 3.1 MSHA biogenesis protein MshI compare
CSW01_08165 +0.4 1.4 carboxynorspermidine synthase compare
CSW01_02390 +0.4 0.9 tRNA-Thr compare
CSW01_01360 +0.4 1.7 sugar transferase compare
CSW01_04135 +0.4 1.3 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare
CSW01_17135 +0.4 1.4 hypothetical protein compare
CSW01_17695 +0.4 2.3 lysoplasmalogenase compare
CSW01_06835 +0.4 0.7 BAX inhibitor protein compare
CSW01_01870 +0.4 2.5 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA compare
CSW01_17115 +0.4 1.3 SgrR family transcriptional regulator compare
CSW01_08260 +0.4 1.4 hypothetical protein compare
CSW01_03865 +0.4 2.3 protein translocase subunit SecF compare
CSW01_00870 +0.4 1.7 cytochrome c5 family protein compare
CSW01_16890 +0.4 2.2 sensor histidine kinase KdpD compare
CSW01_12315 +0.4 2.6 esterase YqiA compare
CSW01_02130 +0.4 3.1 MSHA biogenesis protein MshN compare
CSW01_15380 +0.4 1.7 hypothetical protein compare
CSW01_05675 +0.4 1.8 nuclear transport factor 2 family protein compare
CSW01_06335 +0.4 1.3 (2Fe-2S)-binding protein compare
CSW01_17020 +0.4 1.7 hypothetical protein compare
CSW01_05945 +0.4 1.6 type 1 glutamine amidotransferase compare
CSW01_06050 +0.4 1.7 DUF2786 domain-containing protein compare
CSW01_09920 +0.4 0.7 chromosome partitioning protein ParA compare
CSW01_01425 +0.4 0.5 phosphoribosylamine--glycine ligase compare
CSW01_16850 +0.3 2.7 hybrid sensor histidine kinase/response regulator compare
CSW01_07800 +0.3 2.3 sn-glycerol-3-phosphate import ATP-binding protein UgpC compare
CSW01_10645 +0.3 2.7 flagellar motor switch protein FliG compare
CSW01_16290 +0.3 0.6 DUF1289 domain-containing protein compare
CSW01_03755 +0.3 2.3 recombination-associated protein RdgC compare
CSW01_19620 +0.3 1.4 delta-VPH compare
CSW01_01970 +0.3 2.8 MBL fold metallo-hydrolase compare
CSW01_08030 +0.3 1.5 sensor domain-containing diguanylate cyclase compare
CSW01_15955 +0.3 1.0 DUF3709 domain-containing protein compare
CSW01_12090 +0.3 1.9 hypothetical protein compare
CSW01_10675 +0.3 1.2 flagellar protein FliS compare
CSW01_10730 +0.3 1.3 ArsC family reductase compare
CSW01_02135 +0.3 2.8 MSHA biogenesis protein MshE compare
CSW01_12245 +0.3 1.8 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
CSW01_08400 +0.3 1.8 cystathionine beta-lyase compare
CSW01_09830 +0.3 2.1 XRE family transcriptional regulator compare
CSW01_10060 +0.3 1.3 YchF/TatD family DNA exonuclease compare
CSW01_11580 +0.3 1.6 sigma factor-binding protein Crl compare
CSW01_04995 +0.3 1.9 co-chaperone YbbN compare
CSW01_08690 +0.3 1.8 glucose-1-phosphate adenylyltransferase compare
CSW01_00520 +0.3 1.7 flagellar basal body-associated protein FliL compare
CSW01_04360 +0.3 1.2 IS5/IS1182 family transposase compare
CSW01_09355 +0.3 1.9 DUF2219 domain-containing protein compare
CSW01_01915 +0.3 1.1 bacterioferritin-associated ferredoxin compare
CSW01_00750 +0.3 2.4 cell division ATP-binding protein FtsE compare
CSW01_09000 +0.3 1.4 transcriptional regulator compare
CSW01_01820 +0.3 2.2 N-acetylmuramoyl-L-alanine amidase compare
CSW01_18345 +0.3 1.5 osmotically inducible protein OsmC compare
CSW01_02125 +0.3 2.5 MSHA biogenesis protein MshM compare
CSW01_09800 +0.3 1.6 lipoprotein compare
CSW01_17175 +0.3 1.5 ABC transporter permease compare
CSW01_03775 +0.3 2.4 exopolyphosphatase compare
CSW01_03615 +0.3 2.2 anhydro-N-acetylmuramic acid kinase compare
CSW01_18150 +0.3 0.4 transcription initiation factor TFIIIB compare
CSW01_01975 +0.3 2.3 chemotaxis protein CheX compare
CSW01_18290 +0.3 1.8 phenylalanine 4-monooxygenase compare
CSW01_03510 +0.3 1.9 NADP(H)-dependent aldo-keto reductase compare
CSW01_17880 +0.3 0.7 hypothetical protein compare
CSW01_10685 +0.3 2.4 flagellar hook-associated protein 2 compare
CSW01_00940 +0.3 0.1 hypothetical protein compare
CSW01_00770 +0.3 1.9 hypothetical protein compare
CSW01_09220 +0.3 0.5 cyd operon protein YbgE compare
CSW01_16805 +0.3 1.4 anaerobic ribonucleoside-triphosphate reductase activating protein compare
CSW01_11625 +0.3 1.7 diguanylate cyclase compare
CSW01_09275 +0.3 1.0 hypothetical protein compare
CSW01_18020 +0.3 1.4 DEAD/DEAH box helicase compare
CSW01_12575 +0.3 1.8 transcriptional regulator LeuO compare
CSW01_03845 +0.3 0.7 hypothetical protein compare
CSW01_03760 +0.3 1.6 phosphate regulon transcriptional regulatory protein PhoB compare
CSW01_05920 +0.3 2.2 dicarboxylate/amino acid:cation symporter compare
CSW01_15830 +0.3 1.3 DUF3265 domain-containing protein compare
CSW01_01990 +0.3 1.4 envelope stress response protein PspG compare
CSW01_16860 +0.3 2.1 tellurium resistance protein compare
CSW01_02120 +0.3 2.4 pilus (MSHA type) biogenesis protein MshL compare


Specific Phenotypes

None in this experiment

For Vibrio cholerae E7946 ATCC 55056 in lb_aerobic experiments

For lb_aerobic LB across organisms