Experiment set5IT080 for Pseudomonas fluorescens FW300-N2C3

Compare to:

Inosine carbon source

200 most important genes:

  gene name fitness t score description  
AO356_09525 -5.9 -4.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO356_08635 -5.5 -6.6 ATP phosphoribosyltransferase regulatory subunit compare
AO356_09815 -5.5 -5.3 imidazoleglycerol-phosphate dehydratase compare
AO356_09810 -5.1 -3.5 imidazole glycerol phosphate synthase subunit HisH compare
AO356_21440 -5.0 -9.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO356_09520 -5.0 -4.8 phosphoribosyl-AMP cyclohydrolase compare
AO356_28110 -4.9 -10.5 ATPase compare
AO356_13085 -4.8 -10.2 N-acetylglutamate synthase compare
AO356_18325 -4.8 -12.7 argininosuccinate synthase compare
AO356_21415 -4.7 -10.5 3-isopropylmalate dehydrogenase compare
AO356_18275 -4.7 -11.8 ornithine carbamoyltransferase compare
AO356_12525 -4.7 -9.5 acetylglutamate kinase compare
AO356_06970 -4.7 -9.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO356_16175 -4.7 -6.4 acetolactate synthase 3 regulatory subunit compare
AO356_13250 -4.7 -10.4 dihydroxy-acid dehydratase compare
AO356_09375 -4.7 -24.3 glutamate synthase compare
AO356_02175 -4.6 -10.3 transaldolase compare
AO356_14435 -4.6 -7.1 anthranilate phosphoribosyltransferase compare
AO356_06965 -4.5 -8.7 histidinol dehydrogenase compare
AO356_14440 -4.5 -4.4 indole-3-glycerol-phosphate synthase compare
AO356_09370 -4.5 -13.6 glutamate synthase compare
AO356_06550 -4.5 -13.1 2-isopropylmalate synthase compare
AO356_12520 -4.5 -3.1 orotate phosphoribosyltransferase compare
AO356_13410 -4.4 -13.3 homoserine O-acetyltransferase compare
AO356_16180 -4.4 -15.1 ketol-acid reductoisomerase compare
AO356_13405 -4.3 -10.7 methionine biosynthesis protein MetW compare
AO356_16170 -4.3 -9.5 acetolactate synthase 3 catalytic subunit compare
AO356_16075 -4.3 -2.9 Fis family transcriptional regulator compare
AO356_19615 -4.3 -10.6 hydroxypyruvate isomerase conserved
AO356_14420 -4.2 -14.9 anthranilate synthase compare
AO356_21400 -4.2 -7.9 isopropylmalate isomerase compare
AO356_10910 -4.1 -9.2 tryptophan synthase subunit alpha compare
AO356_07005 -4.1 -2.8 ABC transporter ATP-binding protein compare
AO356_21405 -4.1 -5.5 3-isopropylmalate dehydratase compare
AO356_09800 -4.0 -5.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO356_19455 -4.0 -8.9 OHCU decarboxylase conserved
AO356_10915 -4.0 -9.2 tryptophan synthase subunit beta compare
AO356_19465 -3.9 -5.9 5-hydroxyisourate hydrolase [EC: 3.5.2.17] (from data) conserved
AO356_13605 -3.8 -9.8 5,10-methylenetetrahydrofolate reductase compare
AO356_15165 -3.8 -3.6 protein cII compare
AO356_19460 -3.7 -10.8 allantoinase (EC 3.5.2.5) (from data) conserved
AO356_00950 -3.7 -7.4 Ribokinase (EC 2.7.1.15) (from data) conserved
AO356_05995 -3.7 -4.3 hypothetical protein compare
AO356_21470 -3.6 -8.1 O-succinylhomoserine sulfhydrylase compare
AO356_19795 -3.6 -3.5 glycerol-3-phosphate dehydrogenase compare
AO356_12780 -3.6 -8.5 argininosuccinate lyase compare
AO356_10340 -3.5 -14.6 phosphoserine phosphatase compare
AO356_14295 -3.5 -2.3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO356_08735 -3.4 -13.4 phosphoserine phosphatase compare
AO356_01750 -3.4 -3.3 ATP-dependent Clp protease proteolytic subunit compare
AO356_10300 -3.3 -4.8 3-phosphoglycerate dehydrogenase compare
AO356_28025 -3.3 -8.0 aldehyde dehydrogenase compare
AO356_18025 -3.3 -3.8 ATP-dependent DNA helicase RuvB compare
AO356_19610 -3.2 -4.5 2-hydroxy-3-oxopropionate reductase compare
AO356_14430 -3.2 -9.2 anthranilate synthase compare
AO356_02190 -3.2 -7.6 hypothetical protein compare
AO356_06065 -3.1 -3.2 ArsC family transcriptional regulator compare
AO356_19450 -3.1 -8.8 allantoicase conserved
AO356_07915 -3.1 -2.1 exodeoxyribonuclease V subunit beta compare
AO356_16050 -3.1 -3.6 glucose-6-phosphate isomerase compare
AO356_19335 -3.1 -14.0 peptidase S41 compare
AO356_00970 -3.0 -7.3 LacI family transcriptional regulator conserved
AO356_06005 -3.0 -5.1 zinc metallopeptidase RseP compare
AO356_03350 -2.9 -8.5 glycosyl transferase compare
AO356_23155 -2.9 -10.1 RpiR family transcriptional regulator compare
AO356_15450 -2.9 -17.5 AMP nucleosidase compare
AO356_28115 -2.9 -6.9 GfdT protein compare
AO356_01745 -2.9 -5.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_11315 -2.8 -1.9 shikimate dehydrogenase compare
AO356_10075 -2.8 -8.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO356_06575 -2.8 -3.7 outer membrane protein assembly factor BamB compare
AO356_06995 -2.7 -6.9 outer membrane lipid asymmetry maintenance protein MlaD compare
AO356_03810 -2.7 -6.3 anti-anti-sigma factor compare
AO356_14135 -2.7 -14.5 biotin synthase compare
AO356_24845 -2.6 -4.2 ATPase compare
AO356_03800 -2.6 -2.8 histidine kinase compare
AO356_00955 -2.6 -8.2 LacI family transcriptional regulator compare
AO356_28595 -2.5 -4.7 transcriptional regulator compare
AO356_09795 -2.5 -2.4 imidazole glycerol phosphate synthase subunit HisF compare
AO356_03070 -2.5 -10.9 histidine kinase compare
AO356_06990 -2.5 -4.9 toluene tolerance protein compare
AO356_06385 -2.4 -3.9 recombinase XerD compare
AO356_08235 -2.4 -8.5 histidine kinase compare
AO356_20155 -2.4 -7.1 phosphate acyltransferase compare
AO356_19620 -2.4 -12.4 glyoxylate carboligase conserved
AO356_30345 -2.4 -5.4 IclR family transcriptional regulator compare
AO356_07000 -2.3 -3.1 ABC transporter permease compare
AO356_12380 -2.3 -8.4 ATP-dependent DNA helicase RecG compare
AO356_00960 -2.3 -5.9 ABC transporter permease conserved
AO356_07910 -2.2 -2.1 exodeoxyribonuclease V subunit alpha compare
AO356_04560 -2.2 -3.3 serine peptidase compare
AO356_00965 -2.2 -5.0 sugar ABC transporter ATP-binding protein compare
AO356_05670 -2.2 -3.6 recombinase RecA compare
AO356_03415 -2.2 -10.0 oxidoreductase compare
AO356_03405 -2.2 -5.0 serine acetyltransferase compare
AO356_00560 -2.1 -3.4 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
AO356_16095 -2.1 -8.2 molecular chaperone DnaK compare
AO356_01555 -2.1 -8.9 acyl-CoA dehydrogenase compare
AO356_07480 -2.1 -3.8 carbamoyl phosphate synthase large subunit compare
AO356_05160 -2.0 -7.4 glucose-6-phosphate dehydrogenase compare
AO356_03345 -2.0 -10.2 hypothetical protein compare
AO356_22795 -1.9 -2.7 UTP--glucose-1-phosphate uridylyltransferase compare
AO356_18020 -1.9 -3.4 ATP-dependent DNA helicase RuvA compare
AO356_00875 -1.9 -3.8 MerR family transcriptional regulator compare
AO356_09640 -1.9 -4.8 histidine utilization repressor compare
AO356_00555 -1.9 -9.7 sulfite reductase compare
AO356_12025 -1.9 -10.4 pyruvate carboxylase subunit B compare
AO356_27180 -1.9 -4.9 hypothetical protein compare
AO356_06960 -1.9 -6.3 histidinol-phosphate aminotransferase compare
AO356_03400 -1.8 -6.3 aminotransferase DegT compare
AO356_09300 -1.8 -1.9 type II secretory protein PulM compare
AO356_19420 -1.7 -2.5 septum formation inhibitor compare
AO356_18730 -1.7 -7.8 arginine N-succinyltransferase compare
AO356_19080 -1.7 -8.2 dehydrogenase compare
AO356_08905 -1.7 -2.0 glycosyl transferase compare
AO356_12020 -1.7 -10.0 pyruvate carboxylase subunit A compare
AO356_17515 -1.7 -10.1 murein transglycosylase compare
AO356_11610 -1.6 -3.0 glycerol acyltransferase compare
AO356_09780 -1.6 -4.6 peptidase S41 compare
AO356_22200 -1.6 -6.9 sirohydrochlorin ferrochelatase compare
AO356_06605 -1.5 -3.6 23S rRNA (adenine(2503)-C2)-methyltransferase compare
AO356_28015 -1.5 -4.6 histidine kinase compare
AO356_16505 -1.5 -2.9 molybdopterin-synthase adenylyltransferase compare
AO356_04555 -1.5 -8.3 peptidase M48 compare
AO356_14540 -1.5 -2.2 biotin--protein ligase compare
AO356_24665 -1.5 -6.3 AAA family ATPase compare
AO356_12725 -1.5 -4.5 recombinase XerC compare
AO356_03355 -1.5 -4.4 hypothetical protein compare
AO356_08930 -1.5 -2.7 heptose kinase compare
AO356_02560 -1.5 -6.2 Xanthine dehydrogenase (EC 1.17.1.4) (from data) conserved
AO356_07195 -1.4 -5.7 GntR family transcriptional regulator compare
AO356_17345 -1.4 -2.5 molybdenum cofactor biosynthesis protein MoaE compare
AO356_17080 -1.4 -9.0 stringent starvation protein A compare
AO356_11025 -1.4 -4.0 transcriptional regulator PhoU compare
AO356_07540 -1.4 -1.8 SsrA-binding protein compare
AO356_12485 -1.4 -3.0 DNA-directed RNA polymerase subunit omega compare
AO356_20175 -1.3 -1.7 3-oxoacyl-ACP synthase compare
AO356_17890 -1.3 -2.4 H-NS histone compare
AO356_03420 -1.3 -6.9 UDP-N-acetyl-D-glucosamine dehydrogenase compare
AO356_10585 -1.3 -7.8 hypothetical protein compare
AO356_07270 -1.3 -3.8 peptide ABC transporter ATP-binding protein compare
AO356_19060 -1.3 -7.8 (p)ppGpp synthetase compare
AO356_16955 -1.3 -5.4 disulfide bond formation protein B compare
AO356_03360 -1.2 -3.1 hypothetical protein compare
AO356_04575 -1.2 -7.5 RNA polymerase subunit sigma compare
AO356_16185 -1.2 -4.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
AO356_16070 -1.2 -4.7 poly(A) polymerase compare
AO356_09425 -1.2 -6.1 malate dehydrogenase compare
AO356_24645 -1.2 -4.6 hypothetical protein compare
AO356_12825 -1.2 -1.5 hypothetical protein compare
AO356_02980 -1.2 -5.9 molybdenum cofactor biosynthesis protein MoaA compare
AO356_11465 -1.1 -5.3 DNA polymerase I compare
AO356_12005 -1.1 -6.5 transcriptional regulator compare
AO356_02565 -1.1 -8.6 Xanthine dehydrogenase (EC 1.17.1.4) (from data) conserved
AO356_28020 -1.1 -3.9 ethanol oxidation regulatory protein ercA (from data) compare
AO356_01545 -1.1 -1.4 hypothetical protein compare
AO356_17975 -1.1 -7.1 histidine triad (HIT) protein compare
AO356_16485 -1.0 -4.6 hypothetical protein compare
AO356_10345 -1.0 -4.2 RNA pyrophosphohydrolase compare
AO356_04550 -1.0 -2.5 response regulator SirA compare
AO356_15435 -1.0 -4.5 hydrogenase compare
AO356_19485 -1.0 -6.5 guanine permease conserved
AO356_24650 -1.0 -3.2 BatB protein compare
AO356_03180 -1.0 -3.0 CysB family transcriptional regulator compare
AO356_27250 -1.0 -4.5 hypothetical protein compare
AO356_10695 -1.0 -5.7 diguanylate cyclase compare
AO356_14395 -1.0 -7.2 polyamine ABC transporter substrate-binding protein compare
AO356_02985 -1.0 -4.8 molybdenum cofactor biosynthesis protein B compare
AO356_09045 -1.0 -6.4 potassium transporter KefA compare
AO356_15860 -1.0 -2.0 general secretion pathway protein GspH compare
AO356_24695 -1.0 -3.2 transcriptional regulator compare
AO356_08875 -0.9 -1.6 toluene tolerance protein compare
AO356_28050 -0.9 -2.5 cytochrome c-550 PedF compare
AO356_25535 -0.9 -1.7 hypothetical protein compare
AO356_02570 -0.9 -4.4 molybdenum cofactor sulfurylase compare
AO356_18775 -0.9 -2.4 aspartate kinase compare
AO356_14870 -0.9 -3.5 dTDP-4-dehydrorhamnose reductase compare
AO356_24245 -0.9 -2.5 siderophore-iron reductase FhuF compare
AO356_07845 -0.9 -6.2 MFS transporter compare
AO356_17335 -0.9 -3.1 molybdenum cofactor biosynthesis protein MoaC compare
AO356_20215 -0.9 -3.7 radical SAM protein compare
AO356_16655 -0.9 -4.8 2-alkenal reductase compare
AO356_08000 -0.9 -2.0 short-chain dehydrogenase compare
AO356_21125 -0.9 -2.7 cyclic peptide transporter compare
AO356_11675 -0.9 -4.7 chromosome partitioning protein compare
AO356_03365 -0.9 -2.7 UDP-N-acetylglucosamine 2-epimerase compare
AO356_11850 -0.9 -6.9 glycosyltransferase compare
AO356_00605 -0.9 -2.8 TetR family transcriptional regulator compare
AO356_17770 -0.9 -1.4 hypothetical protein compare
AO356_11990 -0.9 -6.1 DNA helicase II compare
AO356_23425 -0.9 -3.2 saccharopine dehydrogenase compare
AO356_11845 -0.9 -6.5 glycosyltransferase compare
AO356_20935 -0.9 -2.4 antibiotic biosynthesis monooxygenase compare
AO356_22680 -0.9 -2.1 chemotaxis protein CheY compare
AO356_18735 -0.9 -2.5 arginine N-succinyltransferase compare
AO356_16235 -0.9 -7.3 mammalian cell entry protein compare
AO356_27550 -0.8 -2.4 3-oxoacyl-ACP synthase compare
AO356_24640 -0.8 -3.8 protein BatD compare
AO356_16230 -0.8 -5.8 paraquat-inducible protein A compare
AO356_07265 -0.8 -3.1 peptide transporter compare


Specific Phenotypes

For 16 genes in this experiment

For carbon source Inosine in Pseudomonas fluorescens FW300-N2C3

For carbon source Inosine across organisms