Experiment set5IT074 for Pseudomonas fluorescens FW300-N2C3

Compare to:

Carnitine Hydrochloride carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
AO356_13945 -5.4 -8.9 Rieske (2Fe-2S) protein conserved
AO356_13950 -5.2 -8.0 ferredoxin conserved
AO356_13810 -5.0 -6.8 ABC transporter for Carnitine, permease component (from data) conserved
AO356_13840 -5.0 -7.6 L-carnitine 3-dehydrogenase, thioesterase-like subunit CdhB (EC 1.1.1.108) (from data) conserved
AO356_13905 -4.8 -10.8 N-methylproline demethylase conserved
AO356_13915 -4.5 -9.2 electron transfer flavoprotein subunit alpha conserved
AO356_13900 -4.5 -12.5 hydrocarbon binding protein conserved
AO356_21640 -4.4 -6.4 acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (from data) conserved
AO356_13975 -4.3 -9.4 sarcosine oxidase subunit beta conserved
AO356_13895 -4.3 -9.6 peptidase M19 conserved
AO356_13855 -4.3 -10.6 glycine/betaine ABC transporter substrate-binding protein conserved
AO356_13815 -4.2 -12.0 ABC transporter for Carnitine, periplasmic substrate-binding component 1 (from data) conserved
AO356_13985 -4.1 -13.9 sarcosine oxidase subunit alpha conserved
AO356_13845 -4.1 -11.2 Carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) conserved
AO356_13990 -4.0 -6.7 sarcosine oxidase subunit gamma conserved
AO356_13980 -4.0 -7.1 sarcosine oxidase subunit delta conserved
AO356_13825 -4.0 -10.6 AraC family transcriptional regulator conserved
AO356_13970 -3.7 -11.7 serine hydroxymethyltransferase conserved
AO356_13860 -3.6 -5.7 AraC family transcriptional regulator conserved
AO356_13850 -3.6 -7.2 NADPH:quinone reductase conserved
AO356_13910 -3.6 -10.1 (Fe-S)-binding protein conserved
AO356_13805 -3.5 -5.7 ABC transporter for Carnitine, ATPase component (from data) conserved
AO356_21650 -2.9 -6.2 succinyl-CoA--3-ketoacid-CoA transferase conserved
AO356_00425 -2.6 -9.7 acetoacetyl-CoA synthetase conserved
AO356_16680 -2.4 -7.2 phosphate acetyltransferase conserved
AO356_23125 -1.8 -5.3 transcriptional regulator compare
AO356_00410 -1.8 -6.3 Fis family transcriptional regulator compare
AO356_18415 -1.7 -8.4 XRE family transcriptional regulator compare
AO356_10870 -1.7 -9.3 NAD synthetase conserved
AO356_05595 -1.4 -10.0 potassium transporter Kup conserved
AO356_23120 -1.2 -5.0 histidine kinase compare
AO356_10860 -1.1 -7.2 NADP transhydrogenase subunit alpha conserved
AO356_28055 +1.0 7.3 quinonprotein alcohol dehydrogenase compare
AO356_13800 +1.2 7.0 transcriptional repressor BetI conserved


Specific phenotypes for carbon source Carnitine Hydrochloride across organisms