Experiment set5IT068 for Sinorhizobium meliloti 1021

Compare to:

Min media with glucose

200 most important genes:

  gene name fitness t score description  
SMc02766 -7.2 -8.6 tryptophan synthase subunit beta compare
SMc02245 -7.2 -4.9 dihydroorotate dehydrogenase 2 compare
SMc00236 -7.1 -4.9 Indole-3-glycerol phosphate synthase compare
SMc01494 -6.9 -9.5 phosphoserine phosphatase compare
SMc02572 -6.9 -5.6 imidazole glycerol phosphate synthase subunit HisH compare
SMc04405 -6.8 -4.7 3-isopropylmalate dehydrogenase compare
SMc02899 -6.8 -8.1 prephenate dehydratase compare
SMc02767 -6.6 -6.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SM_b21174 -6.4 -4.4 phosphate uptake ABC transporter permease compare
SMc03823 -6.3 -7.5 isopropylmalate isomerase large subunit compare
SMc01843 -6.2 -9.5 5,10-methylenetetrahydrofolate reductase compare
SMc00131 -6.2 -11.2 transcriptional regulator compare
SMc00614 -6.2 -6.0 phosphoribosylglycinamide formyltransferase compare
SMc02574 -6.2 -4.3 imidazoleglycerol-phosphate dehydratase compare
SMc01801 -6.1 -4.2 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc02725 -6.1 -9.3 anthranilate synthase compare
SMc00235 -6.1 -8.3 anthranilate phosphoribosyltransferase compare
SMc01726 -6.1 -5.1 acetylglutamate kinase compare
SMc03797 -6.0 -10.1 homoserine O-succinyltransferase compare
SMa1635 -6.0 -2.4 hypothetical protein compare
SMc02717 -5.9 -9.0 2-isopropylmalate synthase compare
SMc01004 -5.9 -9.0 phosphoribosyl-AMP cyclohydrolase compare
SMc00092 -5.8 -10.5 phosphoadenosine phosphosulfate reductase compare
SMc04028 -5.8 -13.5 glutamate synthase compare
SMc00711 -5.7 -3.9 cyclohexadienyl dehydrogenase compare
SMc04045 -5.7 -8.6 dihydroxy-acid dehydratase compare
SMc03895 -5.6 -13.1 pyruvate carboxylase compare
SMc01431 -5.6 -10.0 acetolactate synthase 3 catalytic subunit compare
SMc00494 -5.6 -2.2 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00488 -5.5 -17.4 phosphoribosylformylglycinamidine synthase II compare
SMc04005 -5.5 -6.6 pyruvate kinase compare
SMc00615 -5.5 -9.9 phosphoribosylaminoimidazole synthetase compare
SMc02138 -5.5 -7.4 acetylornithine transaminase compare
SMc02765 -5.5 -12.4 tryptophan synthase subunit alpha compare
SMc02124 -5.4 -11.0 nitrite reductase compare
SMc02137 -5.4 -5.3 ornithine carbamoyltransferase compare
SMc00412 -5.4 -3.7 orotidine 5'-phosphate decarboxylase compare
SMc00918 -5.4 -9.7 ATP phosphoribosyltransferase regulatory subunit compare
SMc03777 -5.4 -5.2 gamma-glutamyl phosphate reductase compare
SMc02217 -5.3 -7.2 O-succinylhomoserine sulfhydrylase compare
SMc00493 -5.3 -5.1 phosphoribosylformylglycinamidine synthase I compare
SMc00917 -5.3 -5.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00293 -5.3 -11.2 homoserine dehydrogenase compare
SMc01054 -5.2 -5.1 required for sulfate utilization, putative electron source for sulfite reductase CysI (from data) compare
SMc00993 -5.2 -7.1 phosphoribosylamine--glycine ligase compare
SMc00554 -5.1 -6.1 amidophosphoribosyltransferase compare
SMc04002 -5.1 -7.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc03776 -5.1 -3.5 gamma-glutamyl kinase compare
SMc00640 -5.1 -9.7 phosphoserine aminotransferase compare
SMc02165 -5.1 -8.4 orotate phosphoribosyltransferase compare
SMc00091 -5.1 -10.3 sulfate adenylyltransferase compare
SMc03981 -5.0 -4.9 phosphoglycerate kinase compare
SMc02569 -5.0 -4.5 imidazole glycerol phosphate synthase subunit HisF compare
SMc03112 -5.0 -15.6 B12-dependent methionine synthase compare
SMc00495 -5.0 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SM_b21176 -4.9 -4.8 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc02123 -4.9 -4.3 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
SMc04026 -4.9 -8.6 glutamate synthase compare
SM_b21177 -4.9 -7.4 phosphate uptake ABC transporter ATP-binding protein compare
SMc02755 -4.8 -5.7 S-adenosyl-L-homocysteine hydrolase compare
SMc00090 -4.7 -7.8 sulfate adenylyltransferase compare
SMc01206 -4.6 -2.6 queuine tRNA-ribosyltransferase compare
SMc03826 -4.5 -3.1 argininosuccinate synthase compare
SMc02307 -4.5 -6.8 histidinol dehydrogenase compare
SMc03229 -4.4 -3.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc01360 -4.4 -4.2 aspartate carbamoyltransferase catalytic subunit compare
SMc00294 -4.4 -12.5 aminotransferase compare
SMc03070 -4.3 -8.3 glucose-6-phosphate 1-dehydrogenase compare
SMc03068 -4.2 -12.0 phosphogluconate dehydratase compare
SMc01881 -4.2 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02707 -4.2 -4.6 hypothetical protein compare
SMc02166 -4.1 -11.0 dihydroorotase compare
SMc01053 -4.1 -6.8 siroheme synthase compare
SMc04001 -4.1 -1.6 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00815 -4.0 -2.8 inosine 5'-monophosphate dehydrogenase compare
SMc02570 -4.0 -4.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc04088 -4.0 -10.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01430 -3.9 -7.0 acetolactate synthase 3 regulatory subunit compare
SM_b21175 -3.9 -5.0 phosphate uptake ABC transporter permease compare
SMc02425 -3.7 -5.7 transcriptional regulator compare
SMc03763 -3.7 -2.5 cytosine-specific methyltransferase compare
SMc04346 -3.7 -5.5 ketol-acid reductoisomerase compare
SMc00876 -3.6 -7.5 ATP-binding MRP protein compare
SMc00295 -3.5 -1.9 hypothetical protein compare
SMc03978 -3.5 -2.4 transketolase compare
SMc03979 -3.5 -2.3 glyceraldehyde-3-phosphate dehydrogenase compare
SMc01569 -3.4 -1.9 carbamoyl phosphate synthase small subunit compare
SM_b20903 -3.4 -10.3 sugar uptake ABC transporter permease compare
SMc03795 -3.2 -1.8 isopropylmalate isomerase small subunit compare
SM_b20902 -3.2 -11.9 sugar uptake ABC transporter substrate-binding protein precursor compare
SM_b20904 -3.2 -3.1 sugar uptake ABC transporter ATP-binding protein compare
SMc01578 -3.2 -12.0 aspartate aminotransferase compare
SMc02835 -3.1 -8.9 glucokinase compare
SMc00017 -3.1 -1.7 homoserine kinase compare
SMc02983 -3.1 -8.3 ornithine, DAP, or arginine decarboxylase compare
SMc00982 -3.1 -7.5 dioxygenase compare
SMc01880 -3.0 -2.1 pantoate--beta-alanine ligase compare
SMc03924 -3.0 -11.7 glycogen synthase compare
SMc01361 -3.0 -3.0 dihydroorotase compare
SMc01215 -3.0 -2.1 carbamoyl phosphate synthase large subunit compare
SMc02246 -2.9 -1.1 hypothetical protein compare
SMc00361 -2.9 -3.8 hypothetical protein compare
SMc01187 -2.9 -2.2 rare lipoprotein A compare
SMc00641 -2.9 -4.8 D-3-phosphoglycerate dehydrogenase compare
SMc01124 -2.9 -7.0 PII uridylyl-transferase compare
SMc01568 -2.8 -2.7 hypothetical protein compare
SMc00414 -2.8 -7.6 hypothetical protein compare
SMc00492 -2.7 -1.5 hypothetical protein compare
SMc01770 -2.7 -1.9 serine hydroxymethyltransferase compare
SMc01441 -2.6 -5.1 membrane bound protease compare
SMc02451 -2.5 -2.5 hypothetical protein compare
SMc01440 -2.5 -4.7 hydrolase serine protease transmembrane protein compare
SMc01028 -2.5 -14.1 phosphopyruvate hydratase compare
SMc00838 -2.4 -6.2 hypothetical protein compare
SMc01842 -2.3 -2.7 methyltransferase transcription regulator protein compare
SMc00709 -2.3 -2.8 hypothetical protein compare
SMc02102 -2.3 -5.3 hypothetical protein compare
SMc02685 -2.3 -3.9 hypothetical protein compare
SMc02640 -2.2 -5.5 UDP-glucuronic acid epimerase compare
SMc02909 -2.2 -2.5 transglycosylase transmembrane protein compare
SMc03974 -2.1 -5.1 hypothetical protein compare
SMc02641 -2.1 -4.6 UDP-glucose 6-dehydrogenase compare
SMc02058 -2.1 -4.0 YAJC protein compare
SMc02115 -2.1 -1.8 hypothetical protein compare
SMc03100 -2.0 -1.5 hypothetical protein compare
SMc00619 -2.0 -2.4 hypothetical protein compare
SMc02833 -2.0 -2.4 penicillin-insensitive murein endopeptidase compare
SMc04330 -2.0 -2.4 trimethylamine methyltransferase compare
SMc00302 -1.9 -3.5 hypothetical protein compare
SMc01845 -1.9 -2.2 transglycosylase transmembrane protein compare
SMc02753 -1.9 -2.1 PTS system transporter subunit IIA compare
SMc02850 -1.9 -5.0 DNA polymerase I compare
SMc01438 -1.8 -6.1 protease precursor signal peptide protein compare
SMc02683 -1.8 -2.8 hypothetical protein compare
SMc01147 -1.8 -3.7 coproporphyrinogen III oxidase compare
SMc01208 -1.8 -3.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02856 -1.8 -9.8 penicillin-binding protein compare
SMc02582 -1.7 -3.7 hypothetical protein compare
SMa0789 -1.7 -3.1 GntR family transcriptional regulator compare
SMc02363 -1.7 -3.7 cytochrome C-type biogenesis transmembrane protein compare
SMc03069 -1.6 -2.7 6-phosphogluconolactonase compare
SMc00088 -1.5 -1.8 hypothetical protein compare
SM_b20258 -1.5 -4.0 transcriptional regulator compare
SMc02434 -1.5 -2.3 hypothetical protein compare
SMa2281 -1.4 -2.5 hypothetical protein compare
SMc00981 -1.4 -6.8 ferredoxin protein compare
SMc03153 -1.4 -3.0 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc00405 -1.4 -4.8 hypothetical protein compare
SM_b20773 -1.4 -4.1 GntR family transcriptional regulator compare
SMc00914 -1.4 -4.1 oxidoreductase compare
SMc01613 -1.4 -5.4 ribose-5-phosphate isomerase B compare
SMc02485 -1.4 -1.6 signal peptide protein compare
SMc02724 -1.4 -2.5 hypothetical protein compare
SMc03993 -1.4 -4.8 hypothetical protein compare
SMc00450 -1.3 -3.7 protoheme IX farnesyltransferase compare
SMc02234 -1.3 -2.0 hypothetical protein compare
SMc04296 -1.3 -0.8 cell division protein FtsZ compare
SMc00987 -1.3 -1.6 hypothetical protein compare
SMc02838 -1.3 -3.3 phosphoglyceromutase compare
SMc03046 -1.3 -4.7 transcriptional regulator compare
SMc04224 -1.3 -1.2 hypothetical protein compare
SMc00712 -1.2 -2.0 hypothetical protein compare
SMc02362 -1.2 -3.2 cytochrome c-type biogenesis protein CcmE compare
SM_b20823 -1.2 -5.2 cell surface saccharide synthesis protein compare
SMc04348 -1.2 -1.3 transcriptional regulator compare
SMc04213 -1.2 -1.8 diacylglycerol kinase compare
SMc02786 -1.2 -5.3 translocase transmembrane protein compare
SMc02050 -1.2 -3.2 trigger factor compare
SMc02677 -1.1 -3.2 pyrroline-5-carboxylate reductase compare
SMc00760 -1.1 -4.3 recombinase A compare
SMc01852 -1.1 -6.9 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc02573 -1.1 -1.9 hypothetical protein compare
SMc03850 -1.1 -0.9 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02384 -1.1 -5.6 glycosyltransferase transmembrane protein compare
SMc01364 -1.1 -1.0 DNA topoisomerase I compare
SMc03941 -1.1 -3.0 hypothetical protein compare
SMc00150 -1.1 -8.8 hypothetical protein compare
SMc00073 -1.1 -1.5 hypothetical protein compare
SMc00288 -1.1 -4.6 signal peptide protein compare
SMa0431 -1.1 -1.4 hypothetical protein compare
SMc03242 -1.1 -2.9 GTP-binding protein compare
SMc01315 -1.1 -1.2 hypothetical protein compare
SMc00579 -1.1 -4.1 dimethyladenosine transferase compare
SMc02812 -1.0 -3.0 hypothetical protein compare
SMc00821 -1.0 -1.5 hypothetical protein compare
SMc00963 -1.0 -2.5 hypothetical protein compare
SMc04024 -1.0 -4.6 membrane-bound lytic murein transglycosylase compare
SMc01119 -1.0 -1.6 hypothetical protein compare
SMc02834 -1.0 -2.5 methylglyoxal synthase compare
SMc00067 -1.0 -4.9 outer-membranne lipoprotein compare
SMa1878 -1.0 -2.7 transposase compare
SM_b20148 -1.0 -2.8 transcriptional regulator compare
SM_b20387 -1.0 -1.1 transcriptional regulator compare
SMa0659 -1.0 -1.6 cytochrome c binding protein, carboxyl terminus compare
SMc03006 -1.0 -1.1 chemotaxis regulator protein compare
SMc01516 -1.0 -2.5 hypothetical protein compare
SMc02114 -1.0 -2.2 hypothetical protein compare
SMc02543 -0.9 -3.6 hypothetical protein compare
SMc01220 -0.9 -3.4 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc03050 -0.9 -1.9 flagellar biosynthesis regulatory protein FlaF compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in nutrient experiments