Experiment set5IT066 for Klebsiella michiganensis M5al

Compare to:

Cytidine carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS24575 +2.8 4.2 hypothetical protein compare
BWI76_RS07475 +1.9 2.7 DNA-binding transcriptional regulator RamA compare
BWI76_RS24385 +1.8 11.2 phosphodiesterase compare
BWI76_RS16965 +1.5 3.8 murein lipoprotein compare
BWI76_RS11520 +1.5 2.0 hypothetical protein compare
BWI76_RS09150 +1.5 5.3 DNA-binding transcriptional repressor DeoR compare
BWI76_RS05465 +1.4 2.2 amidohydrolase compare
BWI76_RS11700 +1.3 1.8 hypothetical protein compare
BWI76_RS16470 +1.2 2.1 transcriptional repressor NemR compare
BWI76_RS21565 +1.2 1.8 outer membrane protein assembly factor BamE compare
BWI76_RS08275 +1.2 2.1 LexA regulated protein compare
BWI76_RS19700 +1.1 1.5 deoxyribonuclease IV compare
BWI76_RS16900 +1.1 1.6 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS11440 +1.1 1.5 hypothetical protein compare
BWI76_RS17805 +1.1 1.5 membrane protein compare
BWI76_RS16015 +1.0 2.2 pheromone autoinducer 2 transporter compare
BWI76_RS17975 +1.0 3.6 tail-specific protease compare
BWI76_RS07640 +1.0 1.7 short chain dehydrogenase compare
BWI76_RS05045 +1.0 2.6 general secretion pathway protein GspM compare
BWI76_RS01585 +1.0 4.5 transcriptional regulator compare
BWI76_RS20230 +1.0 0.8 hypothetical protein compare
BWI76_RS09860 +1.0 3.4 hypothetical protein compare
BWI76_RS02180 +1.0 0.6 hypothetical protein compare
BWI76_RS08380 +1.0 1.7 endonuclease VIII compare
BWI76_RS12070 +1.0 1.2 hypothetical protein compare
BWI76_RS05135 +1.0 3.9 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS12170 +0.9 2.9 hypothetical protein compare
BWI76_RS16120 +0.9 2.2 4-carboxymuconolactone decarboxylase compare
BWI76_RS08640 +0.9 2.0 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS00025 +0.9 1.2 hypothetical protein compare
BWI76_RS20050 +0.9 1.6 hypothetical protein compare
BWI76_RS04565 +0.9 2.8 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS11035 +0.9 2.8 putative LysR-family transcriptional regulator compare
BWI76_RS23125 +0.9 0.9 propanediol dehydratase small subunit compare
BWI76_RS00720 +0.9 1.3 DNA-binding response regulator compare
BWI76_RS13415 +0.9 2.2 spermidine/putrescine ABC transporter permease compare
BWI76_RS14770 +0.9 1.3 PTS IIA 2 domain protein compare
BWI76_RS01995 +0.8 1.1 AraC family transcriptional regulator compare
BWI76_RS15260 +0.8 1.6 hypothetical protein compare
BWI76_RS13420 +0.8 1.0 ABC transporter permease compare
BWI76_RS04060 +0.8 1.5 hypothetical protein compare
BWI76_RS10570 +0.8 2.9 cysteine ABC transporter substrate-binding protein compare
BWI76_RS07790 +0.8 2.2 plasmid stabilization protein compare
BWI76_RS12860 +0.8 1.3 hypothetical protein compare
BWI76_RS00240 +0.8 1.9 FMN-binding protein MioC compare
BWI76_RS06540 +0.8 1.5 DNA-binding protein HU-beta compare
BWI76_RS20795 +0.8 1.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS14575 +0.8 1.4 TENA/THI-4 family protein compare
BWI76_RS08765 +0.7 2.2 8-amino-7-oxononanoate synthase compare
BWI76_RS25205 +0.7 2.0 hypothetical protein compare
BWI76_RS23860 +0.7 1.7 protein disulfide oxidoreductase compare
BWI76_RS27635 +0.7 1.8 AraC family transcriptional regulator compare
BWI76_RS11895 +0.7 1.8 AraC family transcriptional regulator compare
BWI76_RS07740 +0.7 1.0 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS10720 +0.7 2.4 putrescine importer compare
BWI76_RS12870 +0.7 0.9 putative phytanoyl-CoA dioxygenase compare
BWI76_RS20560 +0.7 1.5 hypothetical protein compare
BWI76_RS16660 +0.7 1.9 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS04955 +0.7 0.9 hypoxanthine phosphoribosyltransferase compare
BWI76_RS20155 +0.7 1.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS20940 +0.7 1.2 uracil/xanthine transporter compare
BWI76_RS14755 +0.7 1.4 SIS domain-containing protein compare
BWI76_RS27680 +0.7 2.0 TetR family transcriptional regulator compare
BWI76_RS17945 +0.7 1.3 hypothetical protein compare
BWI76_RS01290 +0.7 2.7 putative dienelactone hydrolase compare
BWI76_RS12790 +0.7 1.0 lactate dehydrogenase compare
BWI76_RS02595 +0.7 3.2 hypothetical protein compare
BWI76_RS21690 +0.7 1.8 hypothetical protein compare
BWI76_RS07730 +0.7 1.1 iron-enterobactin transporter membrane protein compare
BWI76_RS27825 +0.7 1.9 hypothetical protein compare
BWI76_RS02860 +0.7 1.9 glycine dehydrogenase compare
BWI76_RS09975 +0.7 2.1 cell division inhibitor SulA compare
BWI76_RS23755 +0.7 2.3 transcriptional regulator compare
BWI76_RS00480 +0.7 1.0 hypothetical protein compare
BWI76_RS16980 +0.7 1.3 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS21010 +0.7 2.8 Negative regulator of nickel and cobalt uptake (YfgG) (from data) compare
BWI76_RS05235 +0.7 1.0 hypothetical protein compare
BWI76_RS15265 +0.7 1.6 hypothetical protein compare
BWI76_RS21850 +0.7 2.6 AraC family transcriptional regulator compare
BWI76_RS19575 +0.7 1.9 maleylacetoacetate isomerase compare
BWI76_RS20885 +0.7 1.9 tRNA(Met) cytidine acetyltransferase TmcA compare
BWI76_RS15030 +0.6 2.2 ABC transporter compare
BWI76_RS04815 +0.6 1.6 cell division protein ZapD compare
BWI76_RS18360 +0.6 1.1 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS17350 +0.6 1.5 DNA-binding response regulator compare
BWI76_RS25935 +0.6 1.2 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS13970 +0.6 1.1 ABC transporter compare
BWI76_RS07755 +0.6 2.3 isochorismatase compare
BWI76_RS19615 +0.6 2.2 vancomycin high temperature exclusion protein compare
BWI76_RS17860 +0.6 1.2 YoaH family protein compare
BWI76_RS22845 +0.6 2.0 flavodoxin compare
BWI76_RS09335 +0.6 0.8 baseplate assembly protein W compare
BWI76_RS08735 +0.6 1.2 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS11970 +0.6 1.8 stress response translation initiation inhibitor YciH compare
BWI76_RS15190 +0.6 2.6 GGDEF domain-containing protein compare
BWI76_RS06405 +0.6 1.0 2-dehydropantoate 2-reductase compare
BWI76_RS25915 +0.6 1.6 protein SlyX compare
BWI76_RS00640 +0.6 1.4 L-rhamnose mutarotase compare
BWI76_RS18125 +0.6 1.3 murein DD-endopeptidase MepM compare
BWI76_RS21040 +0.6 3.0 peptidase M4 compare
BWI76_RS06980 +0.6 2.1 ureidoglycolate lyase compare
BWI76_RS18175 +0.6 2.0 hydrolase compare
BWI76_RS21675 +0.6 0.9 hypothetical protein compare
BWI76_RS26260 +0.6 2.3 hypothetical protein compare
BWI76_RS22450 +0.6 0.8 selenoprotein W-related protein compare
BWI76_RS11435 +0.6 1.1 hypothetical protein compare
BWI76_RS14970 +0.6 1.1 pyrroline-5-carboxylate reductase compare
BWI76_RS27915 +0.6 0.7 YceK/YidQ family lipoprotein compare
BWI76_RS14415 +0.6 1.7 transcriptional regulator, TetR family protein compare
BWI76_RS18550 +0.6 1.0 tRNA-Asn compare
BWI76_RS12585 +0.6 2.1 transcriptional regulator compare
BWI76_RS14865 +0.6 2.1 ribose ABC transporter permease compare
BWI76_RS10475 +0.6 1.8 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS10465 +0.6 1.4 hypothetical protein compare
BWI76_RS02225 +0.6 1.0 phosphonate C-P lyase system protein PhnG compare
BWI76_RS20565 +0.6 0.8 hypothetical protein compare
BWI76_RS18455 +0.6 1.0 tRNA-Ser compare
BWI76_RS23150 +0.6 2.2 propanediol utilization phosphotransacylase compare
BWI76_RS21350 +0.6 1.4 anti-RNA polymerase sigma factor SigE compare
BWI76_RS16795 +0.6 1.1 amino acid ABC transporter ATPase compare
BWI76_RS16805 +0.6 1.2 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS18235 +0.6 1.4 trehalose-phosphatase compare
BWI76_RS16055 +0.6 3.0 malonate decarboxylase subunit epsilon compare
BWI76_RS15795 +0.6 1.7 bacteriophage CII family protein compare
BWI76_RS00765 +0.6 1.7 DNA-binding transcriptional regulator CytR compare
BWI76_RS03545 +0.6 2.1 QacE family quaternary ammonium compound efflux SMR transporter compare
BWI76_RS10650 +0.6 1.6 PTS fructose-like transporter subunit EIIB compare
BWI76_RS20085 +0.6 1.4 GNAT family N-acetyltransferase compare
BWI76_RS05955 +0.6 2.2 ABC transporter compare
BWI76_RS03105 +0.6 0.7 myo-inosose-2 dehydratase compare
BWI76_RS12875 +0.6 1.1 bifunctional deaminase-reductase compare
BWI76_RS12745 +0.6 2.0 putative prophage membrane protein compare
BWI76_RS18535 +0.6 3.1 alpha/beta hydrolase compare
BWI76_RS11575 +0.6 2.9 nicotinamidase/pyrazinamidase compare
BWI76_RS15120 +0.6 2.3 hypothetical protein compare
BWI76_RS05330 +0.6 3.3 aminoacyl-tRNA hydrolase compare
BWI76_RS09315 +0.6 0.8 hypothetical protein compare
BWI76_RS25285 +0.6 0.6 HPr family phosphocarrier protein compare
BWI76_RS06520 +0.6 1.8 trigger factor compare
BWI76_RS01940 +0.5 1.5 hypothetical protein compare
BWI76_RS09710 +0.5 1.1 transketolase compare
BWI76_RS04560 +0.5 0.9 holo-ACP synthase CitX compare
BWI76_RS18610 +0.5 2.0 transcriptional regulator LysR compare
BWI76_RS01540 +0.5 0.9 thiamine biosynthesis protein ThiS compare
BWI76_RS23340 +0.5 1.1 transcriptional regulator compare
BWI76_RS19495 +0.5 0.9 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS15345 +0.5 1.9 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS07285 +0.5 2.1 LysR family transcriptional regulator compare
BWI76_RS24080 +0.5 1.2 DUF179 domain-containing protein compare
BWI76_RS16400 +0.5 1.5 pyridoxal kinase compare
BWI76_RS18595 +0.5 1.2 hypothetical protein compare
BWI76_RS23665 +0.5 2.4 2-deoxyribose-5-phosphate aldolase compare
BWI76_RS13790 +0.5 2.2 peptide ABC transporter permease compare
BWI76_RS11635 +0.5 1.1 ABC transporter compare
BWI76_RS07985 +0.5 0.6 fluoride ion transporter CrcB compare
BWI76_RS19795 +0.5 2.4 microcin C ABC transporter ATP-binding protein YejF compare
BWI76_RS21090 +0.5 1.8 cytoskeletal protein RodZ compare
BWI76_RS16810 +0.5 1.1 RpiR family transcriptional regulator compare
BWI76_RS23375 +0.5 2.0 cupin compare
BWI76_RS17645 +0.5 0.8 hypothetical protein compare
BWI76_RS15985 +0.5 2.3 LysR family transcriptional regulator compare
BWI76_RS19705 +0.5 2.1 kinase compare
BWI76_RS21910 +0.5 1.4 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS21810 +0.5 1.1 universal stress protein compare
BWI76_RS12780 +0.5 1.3 hypothetical protein compare
BWI76_RS03610 +0.5 1.4 hypothetical protein compare
BWI76_RS07265 +0.5 1.0 ABC transporter ATP-binding protein compare
BWI76_RS22345 +0.5 3.1 hydrogenase maturation nickel metallochaperone HypA compare
BWI76_RS18780 +0.5 1.0 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS15195 +0.5 1.2 DUF4186 domain-containing protein compare
BWI76_RS27340 +0.5 2.2 hypothetical protein compare
BWI76_RS09025 +0.5 1.1 GntR family transcriptional regulator compare
BWI76_RS23025 +0.5 1.0 cobalt ABC transporter substrate-binding protein CbiN compare
BWI76_RS16910 +0.5 1.0 2-keto-4-pentenoate hydratase compare
BWI76_RS18225 +0.5 1.5 universal stress protein C compare
BWI76_RS17110 +0.5 0.8 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS00715 +0.5 1.3 two-component sensor histidine kinase compare
BWI76_RS20290 +0.5 0.9 thiol:disulfide oxidoreductase compare
BWI76_RS03515 +0.5 1.8 hypothetical protein compare
BWI76_RS19230 +0.5 1.2 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS01600 +0.5 2.0 sensor protein ZraS compare
BWI76_RS08655 +0.5 0.9 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS11900 +0.5 0.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS20730 +0.5 1.0 hypothetical protein compare
BWI76_RS20805 +0.5 1.2 phosphate acetyltransferase compare
BWI76_RS22815 +0.5 3.6 hybrid sensor histidine kinase/response regulator compare
BWI76_RS19580 +0.5 1.4 FAA-hydrolase compare
BWI76_RS10910 +0.5 1.0 hypothetical protein compare
BWI76_RS14915 +0.5 1.2 hypothetical protein compare
BWI76_RS08910 +0.5 1.9 transketolase domain-containing protein compare
BWI76_RS02120 +0.5 2.3 multidrug resistance transporter compare
BWI76_RS10510 +0.5 1.0 OHCU decarboxylase compare
BWI76_RS00595 +0.5 2.5 MFS transporter compare
BWI76_RS17900 +0.5 2.6 PTS mannose transporter subunit IID compare
BWI76_RS17765 +0.5 1.0 hypothetical protein compare
BWI76_RS10735 +0.5 1.0 hypothetical protein compare
BWI76_RS27520 +0.5 1.1 sodium/glutamate symporter compare
BWI76_RS09830 +0.5 1.0 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM compare
BWI76_RS20430 +0.5 1.4 penicillin-insensitive murein endopeptidase compare
BWI76_RS27385 +0.5 1.7 orotate phosphoribosyltransferase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Cytidine in Klebsiella michiganensis M5al

For carbon source Cytidine across organisms