Experiment set5IT062 for Pseudomonas fluorescens FW300-N2E2
LB with Sodium arsenate dibasic heptahydrate 0.0005 M
Group: stressMedia: LB + Sodium arsenate dibasic heptahydrate (5e-04 M), pH=7
Culturing: pseudo6_N2E2_ML5, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=500 rpm
By: Hans_Hualan on 2/2/2016
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 6 genes in this experiment
For stress Sodium arsenate dibasic heptahydrate in Pseudomonas fluorescens FW300-N2E2
For stress Sodium arsenate dibasic heptahydrate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Arsenic resistance | 3 |
| Anaerobic respiratory reductases | 1 |
| Cysteine Biosynthesis | 1 |
| D-galactonate catabolism | 1 |
| DNA-binding regulatory proteins, strays | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| arsenate detoxification III | 2 | 2 | 1 |
| D-galactonate degradation | 3 | 3 | 1 |
| arsenate detoxification I | 6 | 4 | 2 |
| arsenic detoxification (bacteria) | 4 | 2 | 1 |
| arsenic detoxification (plants) | 6 | 3 | 1 |
| L-glucose degradation | 7 | 3 | 1 |
| arsenic detoxification (yeast) | 12 | 4 | 1 |