Experiment set5IT058 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant_medium_Glucose

200 most important genes:

  gene name fitness t score description  
BT3757 -5.0 -3.4 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3759 -4.5 -4.4 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT2074 -4.5 -5.4 ketol-acid reductoisomerase (NCBI ptt file) compare
BT3395 -4.4 -4.3 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT2837 -4.1 -9.9 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT1377 -4.1 -2.8 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT1843 -4.1 -4.0 adenylosuccinate synthetase (NCBI ptt file) compare
BT2402 -3.9 -8.3 homoserine phosphotransferase HomK (from data) compare
BT2836 -3.8 -10.8 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT2403 -3.7 -6.2 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT3718 -3.7 -6.1 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT3733 -3.6 -8.1 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT2401 -3.6 -6.0 threonine synthase (NCBI ptt file) compare
BT3933 -3.6 -4.9 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT2078 -3.6 -5.5 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT0892 -3.6 -2.4 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3760 -3.4 -4.7 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT1859 -3.4 -2.4 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT3549 -3.4 -6.5 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1858 -3.4 -2.4 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT3758 -3.4 -2.3 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1336 -3.3 -3.2 putative translation initiation inhibitor (NCBI ptt file) compare
BT2415 -3.3 -8.6 aspartate aminotransferase (NCBI ptt file) compare
BT3164 -3.3 -9.3 quinolinate synthetase A (NCBI ptt file) compare
BT2076 -3.3 -3.9 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT1374 -3.2 -3.8 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT1857 -3.2 -4.9 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT3184 -3.2 -15.1 L-aspartate oxidase (NCBI ptt file) compare
BT1153 -3.2 -2.2 phosphoserine aminotransferase (NCBI ptt file) compare
BT1607 -3.2 -3.8 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1861 -3.2 -5.3 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT3719 -3.2 -3.7 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT3253 -3.1 -2.1 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT2077 -3.1 -3.7 acetolactate synthase large subunit (NCBI ptt file) compare
BT1379 -3.0 -2.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT3918 -3.0 -4.0 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT0891 -3.0 -2.1 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT1860 -3.0 -2.1 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT2129 -3.0 -4.9 aspartate--ammonia ligase (NCBI ptt file) compare
BT4211 -3.0 -2.0 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT0201 -3.0 -2.0 histidinol dehydrogenase (NCBI ptt file) compare
BT0202 -2.9 -3.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT0203 -2.9 -2.0 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT1375 -2.8 -6.0 aspartokinase (NCBI ptt file) compare
BT1947 -2.8 -1.7 hypothetical protein (NCBI ptt file) compare
BT2080 -2.8 -1.9 L-cysteine desulfidase cdsB (from data) compare
BT3761 -2.8 -3.8 N-succinylglutamate synthase (from data) compare
BT0527 -2.7 -1.9 tryptophan synthase alpha chain (NCBI ptt file) compare
BT3197 -2.7 -1.8 hypothetical protein (NCBI ptt file) compare
BT0530 -2.7 -3.7 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT0490 -2.7 -1.8 hypothetical protein (NCBI ptt file) compare
BT2853 -2.7 -1.8 hypothetical protein (NCBI ptt file) compare
BT1970 -2.7 -7.8 glutamate dehydrogenase (NCBI ptt file) compare
BT0200 -2.6 -1.8 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT0697 -2.6 -1.8 putative phosphatase/phosphohexomutase (NCBI ptt file) compare
BT3320 -2.6 -6.1 dihydrodipicolinate reductase (NCBI ptt file) compare
BT2045 -2.6 -2.5 hypothetical protein (NCBI ptt file) compare
BT3717 -2.6 -3.5 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0511 -2.5 -2.9 hypothetical protein (NCBI ptt file) compare
BT1104 -2.5 -1.5 small heat shock protein (NCBI ptt file) compare
BT0967 -2.4 -1.7 hypothetical protein (NCBI ptt file) compare
BT1747 -2.4 -5.3 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT3193 -2.4 -8.9 putative coenzyme A transferase (NCBI ptt file) compare
BT1378 -2.3 -2.3 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT2932 -2.3 -1.6 transcriptional regulator (NCBI ptt file) compare
BT4046 -2.3 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3936 -2.3 -2.7 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT1733 -2.2 -2.2 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT1152 -2.2 -2.2 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT1381 -2.2 -4.2 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT0738 -2.2 -2.6 serine hydroxymethyltransferase (NCBI ptt file) compare
BT0532 -2.1 -3.5 anthranilate synthase component I (NCBI ptt file) compare
BT1270 -2.1 -4.0 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1112 -2.0 -1.4 transposase (NCBI ptt file) compare
BT4339 -2.0 -2.7 glutamine synthetase (NCBI ptt file) compare
BT1369 -2.0 -1.7 hypothetical protein (NCBI ptt file) compare
BT0528 -2.0 -2.4 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT4746 -2.0 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT2236 -2.0 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0215 -1.9 -1.8 iron uptake regulatory protein (NCBI ptt file) compare
BT0437 -1.9 -1.3 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT4551 -1.9 -2.8 putative GTPase, ThdF family (NCBI ptt file) compare
BT2122 -1.9 -1.9 lysyl-tRNA synthetase (NCBI ptt file) compare
BT3762 -1.9 -3.7 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT1844 -1.9 -3.3 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT4265 -1.9 -1.8 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0015 -1.9 -2.8 rteB, two-component system response regulator (NCBI ptt file) compare
BT1329 -1.9 -2.5 putative thiol peroxidase (NCBI ptt file) compare
BT1380 -1.8 -1.7 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT0529 -1.8 -1.8 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT0427 -1.8 -1.7 xanthine phosphoribosyltransferase (NCBI ptt file) compare
BT1201 -1.8 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT3866 -1.8 -9.2 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT4018 -1.8 -2.4 hypothetical protein (NCBI ptt file) compare
BT1868 -1.8 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT2006 -1.7 -2.0 hypothetical protein (NCBI ptt file) compare
BT1594 -1.7 -3.3 putative ferredoxin (NCBI ptt file) compare
BT3361 -1.7 -5.4 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT0972 -1.7 -1.6 putative oxidoreductase (NCBI ptt file) compare
BT2417 -1.7 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0545 -1.7 -1.6 nitrogen regulatory protein P-II (NCBI ptt file) compare
BT1094 -1.7 -2.2 hypothetical protein (NCBI ptt file) compare
BT1221 -1.7 -1.6 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT1214 -1.6 -2.2 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1363 -1.6 -1.1 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT0647 -1.6 -1.6 thiamine phosphate pyrophosphorylase (NCBI ptt file) compare
BT1808 -1.6 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3935 -1.6 -3.1 aminotransferase (NCBI ptt file) compare
BT2003 -1.6 -1.6 putative membrane peptidase (NCBI ptt file) compare
BT3716 -1.6 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT3980 -1.6 -1.8 hypothetical protein (NCBI ptt file) compare
BT0531 -1.6 -1.9 anthranilate synthase component II (NCBI ptt file) compare
BT0828 -1.6 -1.5 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) compare
BT_2008 -1.6 -1.5 hypothetical protein (RefSeq) compare
BT0214 -1.5 -2.5 hypothetical protein (NCBI ptt file) compare
BT0771 -1.5 -3.7 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT3737 -1.5 -1.7 hypothetical protein (NCBI ptt file) compare
BT0736 -1.5 -2.0 putative transport protein (NCBI ptt file) compare
BT1370 -1.5 -2.0 NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) compare
BT0652 -1.5 -1.7 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
BT1476 -1.5 -2.4 aspartate aminotransferase (NCBI ptt file) compare
BT4733 -1.5 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT1444 -1.5 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2185 -1.5 -3.4 hypothetical protein (NCBI ptt file) compare
BT1746 -1.5 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0651 -1.4 -1.7 thiamine biosynthesis protein ThiG (NCBI ptt file) compare
BT1220 -1.4 -1.4 6-phosphogluconolactonase (NCBI ptt file) compare
BT0934 -1.4 -2.1 hypothetical protein (NCBI ptt file) compare
BT0067 -1.4 -1.5 hypothetical protein (NCBI ptt file) compare
BT0322 -1.4 -2.1 putative oxidoreductase (NCBI ptt file) compare
BT1169 -1.4 -1.6 hypothetical protein (NCBI ptt file) compare
BT0649 -1.4 -2.1 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT1564 -1.4 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT3911 -1.4 -1.9 malate dehydrogenase (NCBI ptt file) compare
BT4556 -1.4 -2.0 hypothetical protein (NCBI ptt file) compare
BT0846 -1.4 -2.2 hypothetical protein (NCBI ptt file) compare
BT3394 -1.4 -4.8 putative arginine decarboxylase (NCBI ptt file) compare
BT3730 -1.3 -1.3 putative regulatory protein (NCBI ptt file) compare
BT0479 -1.3 -1.5 putative glycosyltransferase (NCBI ptt file) compare
BT3168 -1.3 -4.5 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT1979 -1.3 -2.6 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT0681 -1.3 -1.9 two-component system sensor histidine kinase (NCBI ptt file) compare
BT2841 -1.3 -1.2 pyruvate kinase (NCBI ptt file) compare
BT1836 -1.3 -4.8 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT2280 -1.3 -1.9 hypothetical protein (NCBI ptt file) compare
BT0671 -1.3 -1.7 outer membrane protein TolC, putative (NCBI ptt file) compare
BT1422 -1.3 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT2375 -1.3 -2.0 hypothetical protein (NCBI ptt file) compare
BT3845 -1.2 -1.5 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT3981 -1.2 -2.8 hypothetical protein (NCBI ptt file) compare
BT0704 -1.2 -1.2 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT4097 -1.2 -1.4 Trk system K+ uptake protein trkH (NCBI ptt file) compare
BT4031 -1.2 -2.2 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1680 -1.2 -2.0 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT4271 -1.2 -1.9 hypothetical protein (NCBI ptt file) compare
BT1689 -1.2 -1.2 oxaloacetate decarboxylase beta chain (NCBI ptt file) compare
BT1534 -1.2 -1.7 hypothetical protein (NCBI ptt file) compare
BT1905 -1.2 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT1944 -1.2 -1.6 putative transposase (NCBI ptt file) compare
BT2449 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT2059 -1.1 -1.1 TonB (NCBI ptt file) compare
BT2075 -1.1 -2.7 acyl-ACP thioesterase (NCBI ptt file) compare
BT1698 -1.1 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1140 -1.1 -1.8 hypothetical protein (NCBI ptt file) compare
BT3973 -1.1 -1.6 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) compare
BT0475 -1.1 -1.3 putative phosphoheptose isomerase (NCBI ptt file) compare
BT1972 -1.1 -6.5 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT1278 -1.1 -2.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1222 -1.1 -1.1 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT3783 -1.1 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1834 -1.1 -3.1 putative hydrogenase (NCBI ptt file) compare
BT1835 -1.1 -2.0 biotin synthase (NCBI ptt file) compare
BT0778 -1.1 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0151 -1.1 -1.2 hypothetical protein (NCBI ptt file) compare
BT3882 -1.1 -1.6 putative DNA binding protein (NCBI ptt file) compare
BT0901 -1.1 -2.4 putative universal stress protein UspA (NCBI ptt file) compare
BT0185 -1.1 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT1633 -1.1 -2.5 mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT1825 -1.1 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT0621 -1.1 -1.0 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) compare
BT4003 -1.1 -2.1 stationary-phase survival protein SurE (NCBI ptt file) compare
BT0582 -1.1 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT2284 -1.1 -1.7 hypothetical protein (NCBI ptt file) compare
BT1559 -1.1 -3.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4452 -1.1 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT4601 -1.1 -2.4 hypothetical protein (NCBI ptt file) compare
BT1451 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT0648 -1.1 -2.6 molybdopterin biosynthesis protein (NCBI ptt file) compare
BT0400 -1.0 -1.7 putative tyrosine-protein kinase in capsular polysaccharide biosynthesis region (NCBI ptt file) compare
BT0954 -1.0 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1837 -1.0 -3.1 putative GTP-binding protein, putative GTPase (NCBI ptt file) compare
BT4223 -1.0 -1.9 hypothetical protein (NCBI ptt file) compare
BT3438 -1.0 -1.9 hypothetical protein (NCBI ptt file) compare
BT1577 -1.0 -2.1 pyridoxamine 5'-phosphate oxidase (NCBI ptt file) compare
BT0027 -1.0 -2.6 putative transposase (NCBI ptt file) compare
BT3232 -1.0 -1.3 gluconate 5-dehydrogenase (NCBI ptt file) compare
BT2742 -1.0 -1.2 integrase, site-specific recombinase (NCBI ptt file) compare
BT0769 -1.0 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT0667 -1.0 -2.4 signal peptidase I (SPase I) (NCBI ptt file) compare
BT4532 -1.0 -2.3 hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in varel_bryant_medium_glucose experiments