Experiment set5IT055 for Klebsiella michiganensis M5al

Compare to:

L-Malic acid disodium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -9.1 -5.9 histidinol-phosphate transaminase compare
BWI76_RS20355 -8.2 -5.6 colicin V production protein compare
BWI76_RS18950 -7.7 -5.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18925 -7.6 -5.3 histidinol dehydrogenase compare
BWI76_RS04675 -7.0 -6.8 3-isopropylmalate dehydrogenase compare
BWI76_RS21475 -6.7 -8.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04255 -6.7 -6.5 threonine synthase compare
BWI76_RS21465 -6.4 -6.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS23920 -6.4 -4.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS02815 -6.3 -4.3 fructose-bisphosphatase class I compare
BWI76_RS01655 -6.1 -9.3 homoserine O-succinyltransferase compare
BWI76_RS09755 -5.8 -7.9 phosphoserine transaminase compare
BWI76_RS01615 -5.8 -10.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS23360 -5.8 -4.0 diaminopimelate decarboxylase compare
BWI76_RS04685 -5.8 -11.1 putative leucine operon leader peptide compare
BWI76_RS20965 -5.7 -6.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS11965 -5.6 -4.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04245 -5.5 -14.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS07070 -5.5 -5.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04670 -5.5 -10.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04665 -5.5 -21.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS24285 -5.5 -7.8 cystathionine beta-lyase compare
BWI76_RS00850 -5.5 -8.1 acetylglutamate kinase compare
BWI76_RS26085 -5.5 -3.7 3-dehydroquinate synthase compare
BWI76_RS11860 -5.5 -9.8 anthranilate synthase component I compare
BWI76_RS18935 -5.5 -7.1 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04465 -5.4 -5.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS20895 -5.4 -7.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS05840 -5.3 -6.9 glutamate 5-kinase compare
BWI76_RS11850 -5.3 -9.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS23220 -5.3 -7.4 amino-acid N-acetyltransferase compare
BWI76_RS27385 -5.2 -6.1 orotate phosphoribosyltransferase compare
BWI76_RS09645 -5.1 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS02995 -5.0 -8.4 aspartate carbamoyltransferase compare
BWI76_RS04680 -4.9 -12.5 2-isopropylmalate synthase compare
BWI76_RS04705 -4.9 -6.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS04160 -4.9 -6.3 phosphoserine phosphatase compare
BWI76_RS04250 -4.9 -6.5 homoserine kinase compare
BWI76_RS04470 -4.9 -9.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS04645 -4.8 -6.4 3-dehydroquinase compare
BWI76_RS00980 -4.7 -12.2 PLP-dependent threonine dehydratase compare
BWI76_RS08385 -4.7 -5.4 citrate (Si)-synthase compare
BWI76_RS00965 -4.7 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS22755 -4.6 -10.3 phosphoadenosine phosphosulfate reductase compare
BWI76_RS18955 -4.6 -7.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS21265 -4.5 -12.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09910 -4.4 -15.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS22760 -4.4 -7.9 sulfite reductase subunit beta compare
BWI76_RS00975 -4.3 -6.0 dihydroxy-acid dehydratase compare
BWI76_RS00990 -4.2 -10.8 ketol-acid reductoisomerase compare
BWI76_RS00180 -4.2 -2.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS22765 -4.1 -14.0 sulfite reductase subunit alpha compare
BWI76_RS25115 -4.1 -4.5 argininosuccinate synthase compare
BWI76_RS00855 -4.1 -6.9 argininosuccinate lyase compare
BWI76_RS03010 -4.0 -6.0 ornithine carbamoyltransferase compare
BWI76_RS11840 -3.9 -3.8 tryptophan synthase subunit alpha compare
BWI76_RS01610 -3.9 -6.7 phosphoribosylamine--glycine ligase compare
BWI76_RS20435 -3.8 -2.1 chorismate synthase compare
BWI76_RS23365 -3.8 -6.8 LysR family transcriptional regulator compare
BWI76_RS18940 -3.8 -5.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS20350 -3.8 -5.3 amidophosphoribosyltransferase compare
BWI76_RS11855 -3.8 -7.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS15825 -3.7 -4.0 hypothetical protein compare
BWI76_RS09760 -3.7 -4.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00845 -3.7 -7.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS10990 -3.7 -3.3 dihydroorotase compare
BWI76_RS07065 -3.7 -9.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00785 -3.5 -7.0 cystathionine gamma-synthase compare
BWI76_RS11845 -3.5 -3.8 tryptophan synthase subunit beta compare
BWI76_RS02735 -3.5 -6.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00400 -3.4 -2.1 glutamine synthetase compare
BWI76_RS09660 -3.3 -3.2 DNA translocase FtsK compare
BWI76_RS00805 -3.3 -4.3 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS08395 -3.3 -2.9 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS00985 -3.2 -7.7 transcriptional regulator IlvY compare
BWI76_RS00345 -3.2 -3.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS01185 -3.2 -2.2 adenylate cyclase compare
BWI76_RS23230 -3.1 -3.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS05835 -3.0 -3.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS24945 -3.0 -1.6 glutamine amidotransferase compare
BWI76_RS01210 -2.9 -2.8 tyrosine recombinase XerC compare
BWI76_RS26095 -2.8 -2.2 shikimate kinase compare
BWI76_RS20640 -2.8 -5.4 cysteine synthase A compare
BWI76_RS18920 -2.8 -3.4 ATP phosphoribosyltransferase compare
BWI76_RS20970 -2.8 -2.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS27390 -2.8 -3.8 ribonuclease PH compare
BWI76_RS23240 -2.6 -3.8 exonuclease V subunit gamma compare
BWI76_RS27430 -2.5 -1.9 (p)ppGpp synthetase compare
BWI76_RS01800 -2.5 -3.4 glucose-6-phosphate isomerase compare
BWI76_RS20650 -2.5 -2.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS05015 -2.4 -3.9 transcriptional regulator compare
BWI76_RS04240 -2.4 -3.7 thr operon leader peptide compare
BWI76_RS22690 -2.4 -2.3 adenylyl-sulfate kinase compare
BWI76_RS24900 -2.4 -2.5 DeoR family transcriptional regulator compare
BWI76_RS26055 -2.3 -7.0 siroheme synthase compare
BWI76_RS17065 -2.3 -7.2 phosphoenolpyruvate synthase compare
BWI76_RS03080 -2.3 -4.7 (Fe-S)-cluster assembly protein compare
BWI76_RS22695 -2.2 -5.3 sulfate adenylyltransferase compare
BWI76_RS16090 -2.0 -3.0 two-component system response regulator DcuR compare
BWI76_RS27440 -2.0 -4.4 DNA helicase RecG compare
BWI76_RS04510 -1.9 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS07640 -1.9 -2.5 short chain dehydrogenase compare
BWI76_RS20440 -1.9 -1.9 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS26000 -1.9 -6.7 aspartate aminotransferase family protein compare
BWI76_RS06185 -1.8 -6.3 shikimate kinase II compare
BWI76_RS25645 -1.8 -4.9 shikimate dehydrogenase compare
BWI76_RS10745 -1.8 -1.5 hypothetical protein compare
BWI76_RS17720 -1.8 -1.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS02410 -1.7 -2.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS25335 -1.7 -2.1 stringent starvation protein A compare
BWI76_RS14075 -1.6 -2.0 TetR family transcriptional regulator compare
BWI76_RS25920 -1.6 -2.2 peptidylprolyl isomerase compare
BWI76_RS19730 -1.6 -2.3 1-phosphofructokinase compare
BWI76_RS10835 -1.6 -1.9 hypothetical protein compare
BWI76_RS08530 -1.5 -2.9 protein TolA compare
BWI76_RS00390 -1.5 -5.6 two-component system sensor histidine kinase NtrB compare
BWI76_RS09655 -1.5 -4.5 leucine-responsive regulatory protein compare
BWI76_RS21070 -1.4 -2.0 outer membrane protein assembly factor BamB compare
BWI76_RS17945 -1.4 -1.5 hypothetical protein compare
BWI76_RS23480 -1.4 -7.6 EAL domain-containing protein compare
BWI76_RS26175 -1.4 -3.8 DeoR/GlpR family transcriptional regulator compare
BWI76_RS05200 -1.4 -1.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS21480 -1.4 -4.5 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS06730 -1.3 -2.9 lac repressor compare
BWI76_RS00960 -1.3 -3.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS22700 -1.3 -2.9 sulfate adenylyltransferase subunit 2 compare
BWI76_RS25425 -1.3 -1.7 arginine repressor compare
BWI76_RS18165 -1.3 -1.6 NUDIX pyrophosphatase compare
BWI76_RS03415 -1.3 -3.8 LacI family transcriptional regulator compare
BWI76_RS03595 -1.3 -1.2 ethanolamine utilization protein EutM compare
BWI76_RS27075 -1.3 -4.8 IclR family transcriptional regulator compare
BWI76_RS25315 -1.3 -7.0 glutamate synthase large subunit compare
BWI76_RS15835 -1.3 -0.8 hypothetical protein compare
BWI76_RS20995 -1.3 -3.6 RNA degradosome polyphosphate kinase compare
BWI76_RS14935 -1.3 -1.4 NIPSNAP family containing protein compare
BWI76_RS22240 -1.2 -5.9 transcriptional regulator compare
BWI76_RS20360 -1.2 -1.0 cell division protein DedD compare
BWI76_RS19690 -1.2 -2.6 LysR family transcriptional regulator compare
BWI76_RS02530 -1.2 -1.5 tRNA dimethylallyltransferase compare
BWI76_RS19685 -1.2 -3.8 lysine transporter compare
BWI76_RS19010 -1.2 -2.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS08520 -1.2 -2.8 colicin transporter TolQ compare
BWI76_RS08525 -1.2 -2.9 colicin transporter compare
BWI76_RS20375 -1.2 -1.2 membrane protein compare
BWI76_RS02725 -1.2 -1.0 HxlR family transcriptional regulator compare
BWI76_RS26620 -1.2 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS26075 -1.2 -2.6 DNA adenine methylase compare
BWI76_RS26570 -1.2 -2.0 anion permease compare
BWI76_RS22420 -1.1 -2.5 LacI family transcriptional regulator compare
BWI76_RS26760 -1.1 -2.8 C4-dicarboxylate transport protein DctA (from data) compare
BWI76_RS20900 -1.1 -1.2 outer membrane protein assembly factor BamC compare
BWI76_RS25320 -1.1 -4.3 glutamate synthase compare
BWI76_RS17290 -1.1 -2.6 formyltetrahydrofolate deformylase compare
BWI76_RS00970 -1.1 -1.7 branched chain amino acid aminotransferase compare
BWI76_RS02970 -1.1 -4.6 trehalose operon repressor compare
BWI76_RS15840 -1.1 -2.8 prophage protein compare
BWI76_RS05680 -1.1 -3.5 LacI family transcriptional regulator compare
BWI76_RS23265 -1.1 -2.5 hypothetical protein compare
BWI76_RS21685 -1.1 -1.3 hypothetical protein compare
BWI76_RS25420 -1.1 -3.2 malate dehydrogenase compare
BWI76_RS24850 -1.1 -4.8 DeoR family transcriptional regulator compare
BWI76_RS15980 -1.1 -2.0 lysine transporter LysE compare
BWI76_RS09195 -1.1 -1.3 N-acetyltransferase compare
BWI76_RS15845 -1.1 -1.2 hypothetical protein compare
BWI76_RS01070 -1.1 -3.4 thiol reductase thioredoxin compare
BWI76_RS15830 -1.1 -1.8 hypothetical protein compare
BWI76_RS26180 -1.1 -2.5 rhomboid family intramembrane serine protease GlpG compare
BWI76_RS15955 -1.0 -7.4 transcriptional regulator compare
BWI76_RS09190 -1.0 -2.6 hypothetical protein compare
BWI76_RS07465 -1.0 -2.1 TetR family transcriptional regulator compare
BWI76_RS03225 -1.0 -4.3 transcriptional regulator compare
BWI76_RS10060 -1.0 -1.2 acylphosphatase compare
BWI76_RS23895 -1.0 -1.3 Xaa-Pro aminopeptidase compare
BWI76_RS09635 -1.0 -2.6 amino acid ABC transporter ATP-binding protein compare
BWI76_RS07645 -1.0 -1.5 short-chain dehydrogenase/reductase compare
BWI76_RS01000 -1.0 -1.6 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS13400 -1.0 -2.1 GntR family transcriptional regulator compare
BWI76_RS02855 -1.0 -1.7 cytochrome B562 compare
BWI76_RS21580 -1.0 -1.4 SsrA-binding protein compare
BWI76_RS23015 -1.0 -1.2 cobalt transporter ATP-binding subunit compare
BWI76_RS06530 -1.0 -3.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS08425 -1.0 -2.7 succinyl-CoA ligase subunit beta compare
BWI76_RS01890 -1.0 -2.5 transcriptional regulator Zur compare
BWI76_RS18605 -0.9 -1.3 oxidoreductase molybdopterin-binding protein compare
BWI76_RS14625 -0.9 -1.2 protein TolA compare
BWI76_RS16275 -0.9 -1.7 fumarate hydratase FumA compare
BWI76_RS27425 -0.9 -0.9 DNA-directed RNA polymerase subunit omega compare
BWI76_RS04270 -0.9 -1.8 transaldolase compare
BWI76_RS15810 -0.9 -3.7 hypothetical protein compare
BWI76_RS03660 -0.9 -3.0 hypothetical protein compare
BWI76_RS22805 -0.9 -4.1 GTP diphosphokinase compare
BWI76_RS22705 -0.9 -4.3 siroheme synthase compare
BWI76_RS04530 -0.9 -1.5 peptidylprolyl isomerase SurA compare
BWI76_RS02610 -0.9 -4.1 transcriptional regulator compare
BWI76_RS22950 -0.9 -2.0 membrane protein compare
BWI76_RS23915 -0.9 -1.5 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS21140 -0.9 -1.4 molecular chaperone HscA compare
BWI76_RS04955 -0.9 -1.3 hypoxanthine phosphoribosyltransferase compare
BWI76_RS02990 -0.9 -2.1 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS20715 -0.9 -1.7 RpoE-regulated lipoprotein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source L-Malic acid disodium salt monohydrate across organisms