Experiment set5IT054 for Methanococcus maripaludis S2

Compare to:

Formate with EDTA 3.9 mM

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS03960 +2.6 4.1 hypothetical protein compare
MMP_RS02800 +2.4 10.0 nucleotidyltransferase domain-containing protein compare
MMP_RS00325 +1.3 3.7 RNA-binding protein compare
MMP_RS06925 +1.3 3.2 ribonuclease VapC4 compare
MMP_RS03320 +1.1 5.4 metal-dependent transcriptional regulator compare
MMP_RS03475 +1.1 1.1 hypothetical protein compare
MMP_RS07005 +1.1 1.1 4Fe-4S binding protein compare
MMP_RS01545 +1.1 1.6 CBS domain-containing protein compare
MMP_RS00945 +1.0 2.1 PadR family transcriptional regulator compare
MMP_RS06905 +1.0 1.5 hypothetical protein compare
MMP_RS06705 +1.0 4.2 formate/nitrite transporter family protein compare
MMP_RS02470 +1.0 1.1 helix-turn-helix transcriptional regulator compare
MMP_RS06630 +1.0 1.5 UPF0058 family protein compare
MMP_RS01610 +1.0 4.0 hypothetical protein compare
MMP_RS05435 +0.9 7.0 5'/3'-nucleotidase SurE compare
MMP_RS09035 +0.9 1.8 hypothetical protein compare
MMP_RS07180 +0.9 4.0 DEAD/DEAH box helicase compare
MMP_RS00450 +0.9 0.8 4Fe-4S binding protein compare
MMP_RS07540 +0.8 2.4 CBS domain-containing protein compare
MMP_RS07365 +0.8 6.6 2-phosphoglycerate kinase compare
MMP_RS02345 +0.8 2.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08070 +0.8 4.0 DUF2096 domain-containing protein compare
MMP_RS03220 +0.8 1.8 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS01620 +0.8 3.4 hypothetical protein compare
MMP_RS05425 +0.8 3.0 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS06525 +0.8 1.8 YciI family protein compare
MMP_RS02355 +0.7 1.9 30S ribosomal protein S27ae compare
MMP_RS06720 +0.7 5.0 response regulator transcription factor compare
MMP_RS01140 +0.7 2.9 molybdate ABC transporter permease subunit compare
MMP_RS07835 +0.7 3.1 TldD/PmbA family protein compare
MMP_RS06770 +0.7 4.1 DHH family phosphoesterase compare
MMP_RS01370 +0.7 4.3 acetate--CoA ligase family protein compare
MMP_RS03685 +0.7 4.8 Mrp/NBP35 family ATP-binding protein compare
MMP_RS02010 +0.7 3.2 PHP domain-containing protein compare
MMP_RS00830 +0.6 1.4 purine phosphoribosyltransferase family protein compare
MMP_RS08365 +0.6 2.0 energy conserving hydrogenase EhbF compare
MMP_RS05540 +0.6 2.3 hypothetical protein compare
MMP_RS02340 +0.6 0.9 DNA-directed RNA polymerase subunit E'' compare
MMP_RS08790 +0.6 1.3 translation initiation factor IF-2 subunit alpha compare
MMP_RS07555 +0.6 0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS07605 +0.6 2.2 diadenylate cyclase compare
MMP_RS06715 +0.6 4.5 cache domain-containing protein compare
MMP_RS02930 +0.6 2.2 class I SAM-dependent methyltransferase compare
MMP_RS06600 +0.5 1.3 class III signal peptide-containing protein compare
MMP_RS06215 +0.5 2.0 30S ribosomal protein S6e compare
MMP_RS06660 +0.5 2.8 glycosyltransferase family 4 protein compare
MMP_RS08215 +0.5 1.3 DUF483 domain-containing protein compare
MMP_RS03465 +0.5 1.0 adenine phosphoribosyltransferase compare
MMP_RS06895 +0.5 0.8 selenocysteine-specific translation elongation factor compare
MMP_RS06535 +0.5 1.9 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS07075 +0.5 2.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS07615 +0.5 2.2 energy-coupling factor ABC transporter permease compare
MMP_RS00740 +0.5 1.1 cyclase family protein compare
MMP_RS00050 +0.5 2.1 AarF/UbiB family protein compare
MMP_RS07625 +0.5 1.0 cobalt ECF transporter T component CbiQ compare
MMP_RS03430 +0.5 3.0 bile acid:sodium symporter family protein compare
MMP_RS08320 +0.5 2.9 molybdopterin molybdotransferase MoeA compare
MMP_RS07620 +0.5 2.4 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01755 +0.5 0.8 DUF2097 domain-containing protein compare
MMP_RS03640 +0.5 1.9 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02955 +0.5 1.0 DJ-1/PfpI family protein compare
MMP_RS05065 +0.5 1.5 CooT family nickel-binding protein compare
MMP_RS02085 +0.4 2.1 inosine/xanthosine triphosphatase compare
MMP_RS04715 +0.4 2.0 CBS domain-containing protein compare
MMP_RS07725 +0.4 1.5 4Fe-4S dicluster domain-containing protein compare
MMP_RS08315 +0.4 0.7 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS06340 +0.4 2.4 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07730 +0.4 0.9 pyruvate synthase subunit beta compare
MMP_RS04985 +0.4 1.1 DUF2180 family protein compare
MMP_RS08785 +0.4 0.6 RNA-protein complex protein Nop10 compare
MMP_RS02310 +0.4 1.0 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS08355 +0.4 1.6 Na(+)/H(+) antiporter subunit B compare
MMP_RS08580 +0.4 1.2 flagellin compare
MMP_RS01540 +0.4 1.5 DUF504 domain-containing protein compare
MMP_RS03670 +0.4 2.3 DUF1890 domain-containing protein compare
MMP_RS09020 +0.4 0.8 hypothetical protein compare
MMP_RS06885 +0.4 1.2 50S ribosome-binding GTPase compare
MMP_RS00335 +0.4 1.8 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS05640 +0.4 1.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00060 +0.4 0.5 3-dehydroquinate synthase II compare
MMP_RS06500 +0.4 2.4 ATP-binding protein compare
MMP_RS01465 +0.4 1.6 hypothetical protein compare
MMP_RS01885 +0.4 2.2 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS02770 +0.4 0.8 hypothetical protein compare
MMP_RS06140 +0.4 0.8 radical SAM protein compare
MMP_RS04035 +0.4 0.7 hypothetical protein compare
MMP_RS01075 +0.4 0.9 hypothetical protein compare
MMP_RS05850 +0.4 1.3 Ldh family oxidoreductase compare
MMP_RS08280 +0.4 1.5 proteasome assembly chaperone family protein compare
MMP_RS06730 +0.4 0.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS08630 +0.4 1.6 archaellar assembly protein FlaJ compare
MMP_RS05635 +0.4 2.2 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS00810 +0.4 2.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS05825 +0.4 1.7 peptidyl-prolyl cis-trans isomerase compare
MMP_RS01965 +0.4 1.1 DUF1616 domain-containing protein compare
MMP_RS06980 +0.3 1.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS07705 +0.3 2.6 transcriptional regulator compare
MMP_RS08340 +0.3 1.6 4Fe-4S binding protein compare
MMP_RS06185 +0.3 1.1 thermonuclease family protein compare
MMP_RS07390 +0.3 0.9 cell division protein FtsZ compare
MMP_RS08275 +0.3 2.7 hypothetical protein compare
MMP_RS06035 +0.3 2.4 glycosyltransferase family 2 protein compare
MMP_RS00395 +0.3 0.9 MGMT family protein compare
MMP_RS01575 +0.3 1.6 aldolase compare
MMP_RS02700 +0.3 1.4 formylmethanofuran dehydrogenase subunit C compare
MMP_RS04480 +0.3 2.8 lysine 2 3-aminomutase compare
MMP_RS03335 +0.3 1.6 ABC transporter permease compare
MMP_RS06625 +0.3 0.7 DNA primase compare
MMP_RS04060 +0.3 1.3 hypothetical protein compare
MMP_RS00250 +0.3 2.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS07095 +0.3 0.7 PspC domain-containing protein compare
MMP_RS05550 +0.3 0.4 cation:proton antiporter compare
MMP_RS05720 +0.3 1.4 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS02795 +0.3 2.0 sulfate permease compare
MMP_RS01220 +0.3 1.8 hypothetical protein compare
MMP_RS03070 +0.3 1.2 AzlD domain-containing protein compare
MMP_RS02885 +0.3 2.6 molybdopterin biosynthesis protein compare
MMP_RS06270 +0.3 1.4 TIGR00300 family protein compare
MMP_RS02790 +0.3 0.6 class III signal peptide-containing protein compare
MMP_RS07330 +0.3 2.6 membrane protein compare
MMP_RS05580 +0.3 2.6 glycosyltransferase compare
MMP_RS00635 +0.3 1.0 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS05085 +0.3 1.3 AAA family ATPase compare
MMP_RS04515 +0.3 1.9 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMP_RS01745 +0.3 1.8 AMP phosphorylase compare
MMP_RS07630 +0.3 0.7 ATP-binding cassette domain-containing protein compare
MMP_RS01675 +0.3 0.8 hypothetical protein compare
MMP_RS07695 +0.3 1.3 DUF3236 domain-containing protein compare
MMP_RS03890 +0.3 1.2 DUF2540 domain-containing protein compare
MMP_RS02810 +0.3 1.1 hypothetical protein compare
MMP_RS01570 +0.3 0.7 hypothetical protein compare
MMP_RS02245 +0.3 0.9 hypothetical protein compare
MMP_RS04650 +0.3 1.3 tetratricopeptide repeat protein compare
MMP_RS00120 +0.3 1.9 LysR family transcriptional regulator compare
MMP_RS02765 +0.3 1.6 ABC transporter ATP-binding protein compare
MMP_RS01285 +0.3 2.4 hypothetical protein compare
MMP_RS05090 +0.3 1.8 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS07135 +0.3 1.3 coenzyme F420 hydrogenase subunit beta compare
MMP_RS02315 +0.3 1.3 RimK family alpha-L-glutamate ligase compare
MMP_RS00445 +0.3 1.3 7-carboxy-7-deazaguanine synthase QueE compare
MMP_RS00710 +0.3 1.4 hypothetical protein compare
MMP_RS06445 +0.3 1.6 DUF89 domain-containing protein compare
MMP_RS01210 +0.3 1.1 sodium:solute symporter compare
MMP_RS08155 +0.3 1.2 hypothetical protein compare
MMP_RS05415 +0.3 0.8 DUF22 domain-containing protein compare
MMP_RS00935 +0.3 1.7 MATE family efflux transporter compare
MMP_RS05345 +0.3 1.3 hypothetical protein compare
MMP_RS07875 +0.3 1.2 hypothetical protein compare
MMP_RS08670 +0.3 1.3 metallophosphoesterase compare
MMP_RS07755 +0.3 0.5 DUF555 domain-containing protein compare
MMP_RS04695 +0.3 1.4 selenide water dikinase SelD compare
MMP_RS02750 +0.3 1.6 HAD-IC family P-type ATPase compare
MMP_RS06875 +0.3 1.1 FAD-dependent oxidoreductase compare
MMP_RS04430 +0.3 0.9 DUF1847 domain-containing protein compare
MMP_RS08855 +0.3 1.8 hypothetical protein compare
MMP_RS03615 +0.3 1.3 4Fe-4S binding protein compare
MMP_RS03770 +0.3 1.5 hydroxylamine reductase compare
MMP_RS02415 +0.3 1.0 site-specific integrase compare
MMP_RS04520 +0.2 1.0 nucleoside deaminase compare
MMP_RS02295 +0.2 1.3 TatD family hydrolase compare
MMP_RS03150 +0.2 2.0 phosphoglycerate mutase compare
MMP_RS01310 +0.2 2.0 hypothetical protein compare
MMP_RS04485 +0.2 1.7 putative beta-lysine N-acetyltransferase compare
MMP_RS08440 +0.2 0.9 cell division protein SepF compare
MMP_RS01865 +0.2 0.6 GPR1/FUN34/YaaH family transporter compare
MMP_RS03245 +0.2 0.9 DNA repair and recombination protein RadB compare
MMP_RS06100 +0.2 1.5 GNAT family N-acetyltransferase compare
MMP_RS01800 +0.2 1.0 TIGR00303 family protein compare
MMP_RS08335 +0.2 1.4 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS00240 +0.2 2.1 type II secretion system F family protein compare
MMP_RS05355 +0.2 0.3 hypothetical protein compare
MMP_RS02725 +0.2 1.2 molybdate ABC transporter permease subunit compare
MMP_RS02670 +0.2 1.4 ATP-binding cassette domain-containing protein compare
MMP_RS06015 +0.2 1.6 flavodoxin family protein compare
MMP_RS01455 +0.2 1.1 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS01945 +0.2 1.1 DUF4350 domain-containing protein compare
MMP_RS03800 +0.2 0.9 hypothetical protein compare
MMP_RS02375 +0.2 1.6 hypothetical protein compare
MMP_RS05460 +0.2 1.2 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS04790 +0.2 1.5 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS03900 +0.2 1.2 minichromosome maintenance protein MCM compare
MMP_RS01665 +0.2 0.9 DUF2111 domain-containing protein compare
MMP_RS05170 +0.2 1.1 lysine exporter LysO family protein compare
MMP_RS06020 +0.2 0.8 archaeoflavoprotein AfpA compare
MMP_RS04495 +0.2 1.4 cation:proton antiporter compare
MMP_RS04635 +0.2 1.0 GNAT family N-acetyltransferase compare
MMP_RS08345 +0.2 1.5 4Fe-4S binding protein compare
MMP_RS01475 +0.2 1.2 phosphosulfolactate synthase compare
MMP_RS04965 +0.2 1.2 thioredoxin family protein compare
MMP_RS01910 +0.2 1.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS05440 +0.2 1.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS01190 +0.2 1.2 cadmium-translocating P-type ATPase compare
MMP_RS06170 +0.2 1.1 ABC transporter ATP-binding protein compare
MMP_RS03140 +0.2 1.4 hypothetical protein compare
MMP_RS00660 +0.2 1.4 alkaline phosphatase family protein compare
MMP_RS02260 +0.2 1.4 lactate utilization protein compare
MMP_RS08660 +0.2 1.3 DHH family phosphoesterase compare
MMP_RS02975 +0.2 1.1 DUF2124 domain-containing protein compare
MMP_RS03830 +0.2 0.9 exodeoxyribonuclease VII large subunit compare
MMP_RS09025 +0.2 0.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress EDTA across organisms