Experiment set5IT053 for Sphingomonas koreensis DSMZ 15582

Compare to:

LB with MreB Perturbing Compound A22 0.01 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
Ga0059261_2120 +1.2 3.8 hypothetical protein compare
Ga0059261_2119 +1.2 4.6 Flagellar motor protein compare
Ga0059261_3948 +1.0 3.3 type II secretion system protein H compare
Ga0059261_2403 +0.8 4.7 hypothetical protein compare
Ga0059261_0770 +0.8 1.9 hypothetical protein compare
Ga0059261_2128 +0.8 3.4 Predicted membrane protein compare
Ga0059261_2121 +0.8 5.1 hypothetical protein compare
Ga0059261_2402 +0.7 5.5 phage portal protein, HK97 family compare
Ga0059261_0889 +0.7 1.5 Cold shock proteins compare
Ga0059261_3940 +0.7 4.2 hypothetical protein compare
Ga0059261_2395 +0.7 3.0 hypothetical protein compare
Ga0059261_4060 +0.7 2.2 Predicted membrane protein compare
Ga0059261_2118 +0.7 3.7 flagellar motor stator protein MotA compare
Ga0059261_2400 +0.6 3.6 Uncharacterized conserved protein compare
Ga0059261_1811 +0.6 2.0 ATP:cob(I)alamin adenosyltransferase compare
Ga0059261_2406 +0.6 5.0 Glutathione-dependent formaldehyde-activating enzyme compare
Ga0059261_3205 +0.6 4.6 transaminase, acetylornithine/succinylornithine family compare
Ga0059261_0059 +0.6 1.5 Stress-induced morphogen (activity unknown) compare
Ga0059261_2125 +0.6 3.8 ATP-dependent helicase HrpB compare
Ga0059261_2130 +0.6 4.3 Uncharacterized conserved protein compare
Ga0059261_3491 +0.6 3.7 hypothetical protein compare
Ga0059261_2086 +0.6 1.3 SAF-like compare
Ga0059261_0237 +0.6 2.2 phosphoribosylanthranilate isomerase (EC 5.3.1.24) compare
Ga0059261_3951 +0.5 3.8 Type II secretory pathway, component PulM compare
Ga0059261_2132 +0.5 1.8 transcriptional regulator, BadM/Rrf2 family compare
Ga0059261_3946 +0.5 3.1 Type IV pilus biogenesis/PDZ domain compare
Ga0059261_3969 +0.5 2.6 Serine hydrolase compare
Ga0059261_2404 +0.5 4.0 Protein of unknown function (DUF2793)/Caudovirus prohead protease compare
Ga0059261_0133 +0.5 2.4 GTP-binding protein HflX compare
Ga0059261_3938 +0.5 3.7 Imidazolonepropionase and related amidohydrolases compare
Ga0059261_3949 +0.5 4.0 type II secretion system protein G compare
Ga0059261_3345 +0.5 1.6 TlyA family rRNA methyltransferase/putative hemolysin compare
Ga0059261_0444 +0.5 2.1 Heavy-metal resistance compare
Ga0059261_0208 +0.5 2.7 Response regulator receiver domain compare
Ga0059261_3944 +0.5 3.0 hypothetical protein compare
Ga0059261_2117 +0.5 4.1 Transposase and inactivated derivatives compare
Ga0059261_3937 +0.5 4.3 Imidazolonepropionase and related amidohydrolases compare
Ga0059261_2309 +0.5 2.7 transcriptional regulator, LacI family compare
Ga0059261_0973 +0.5 2.4 hypothetical protein compare
Ga0059261_3941 +0.5 4.7 Predicted phosphatase compare
Ga0059261_2129 +0.5 3.1 Beta-propeller domains of methanol dehydrogenase type compare
Ga0059261_2399 +0.5 3.6 PilZ domain compare
Ga0059261_4185 +0.5 1.5 hypothetical protein compare
Ga0059261_0993 +0.5 1.2 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Ga0059261_2115 +0.5 4.0 transcriptional regulator, TetR family compare
Ga0059261_1772 +0.5 1.8 MobA/MobL family compare
Ga0059261_3196 +0.5 1.4 Transcriptional regulator compare
Ga0059261_2401 +0.5 3.8 Spermine/spermidine synthase compare
Ga0059261_2407 +0.5 3.4 AraC-type DNA-binding domain-containing proteins compare
Ga0059261_2742 +0.5 1.8 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
Ga0059261_0720 +0.5 1.5 Predicted small integral membrane protein compare
Ga0059261_3356 +0.5 0.9 hypothetical protein compare
Ga0059261_1050 +0.5 1.3 hypothetical protein compare
Ga0059261_2059 +0.5 3.6 Flagellar biosynthesis pathway, component FlhB compare
Ga0059261_3992 +0.4 1.3 Uncharacterized protein conserved in bacteria compare
Ga0059261_1596 +0.4 1.7 CBS domain compare
Ga0059261_1119 +0.4 1.5 Chemotaxis signal transduction protein compare
Ga0059261_3957 +0.4 2.2 prepilin-type N-terminal cleavage/methylation domain compare
Ga0059261_2396 +0.4 2.3 hypothetical protein compare
Ga0059261_3952 +0.4 3.2 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Ga0059261_2124 +0.4 2.5 hypothetical protein compare
Ga0059261_2413 +0.4 1.2 hypothetical protein compare
Ga0059261_3950 +0.4 3.6 Type II secretion system (T2SS), protein L compare
Ga0059261_2019 +0.4 1.4 Uncharacterized protein conserved in bacteria compare
Ga0059261_3896 +0.4 1.8 integration host factor, beta subunit compare
Ga0059261_2593 +0.4 1.6 hypothetical protein compare
Ga0059261_2415 +0.4 3.3 Phytoene/squalene synthetase compare
Ga0059261_2398 +0.4 2.3 hypothetical protein compare
Ga0059261_1914 +0.4 1.3 Acetyltransferases compare
Ga0059261_1406 +0.4 1.6 Acetyltransferase (GNAT) family compare
Ga0059261_2745 +0.4 3.3 Myo-inositol-1-phosphate synthase compare
Ga0059261_3536 +0.4 1.8 hypothetical protein compare
Ga0059261_2412 +0.4 3.4 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components compare
Ga0059261_2397 +0.4 2.6 Uncharacterized conserved protein compare
Ga0059261_2980 +0.4 3.6 Outer membrane protein compare
Ga0059261_0926 +0.4 1.7 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Ga0059261_3052 +0.4 2.0 Uncharacterized conserved protein (DUF2285) compare
Ga0059261_2056 +0.4 2.9 Predicted acyl-CoA transferases/carnitine dehydratase compare
Ga0059261_2113 +0.4 3.3 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Ga0059261_2313 +0.4 2.0 condensin subunit Smc compare
Ga0059261_3569 +0.4 1.0 chaperone protein DnaJ compare
Ga0059261_2131 +0.4 2.1 large conductance mechanosensitive channel protein compare
Ga0059261_2408 +0.4 3.2 Acetyltransferases compare
Ga0059261_2411 +0.4 3.5 Uncharacterized protein conserved in bacteria compare
Ga0059261_2680 +0.4 0.8 hypothetical protein compare
Ga0059261_3613 +0.4 2.1 Dihydroneopterin aldolase compare
Ga0059261_3201 +0.4 3.3 Metallo-beta-lactamase superfamily compare
Ga0059261_0452 +0.4 2.0 Predicted membrane protein compare
Ga0059261_0448 +0.4 0.9 hypothetical protein compare
Ga0059261_2134 +0.4 2.7 Beta-lactamase class C and other penicillin binding proteins compare
Ga0059261_0757 +0.4 1.3 Predicted transcriptional regulators compare
Ga0059261_2419 +0.4 2.7 Glutathione S-transferase compare
Ga0059261_2547 +0.4 0.6 tRNA compare
Ga0059261_2114 +0.4 3.4 Outer membrane receptor proteins, mostly Fe transport compare
Ga0059261_1799 +0.4 1.2 Uncharacterized protein conserved in bacteria (DUF2059) compare
Ga0059261_2466 +0.4 2.6 DnaJ domain/DnaJ C terminal domain compare
Ga0059261_1253 +0.4 1.1 Uncharacterized protein conserved in bacteria compare
Ga0059261_3783 +0.4 1.8 hypothetical protein compare
Ga0059261_0660 +0.4 2.3 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) compare
Ga0059261_2116 +0.4 3.0 Integrase compare
Ga0059261_2049 +0.4 2.1 argininosuccinate lyase compare
Ga0059261_3931 +0.4 2.8 Predicted membrane protein/domain compare
Ga0059261_3953 +0.4 3.0 Type II secretory pathway, component PulF compare
Ga0059261_1286 +0.4 2.3 phasin family protein compare
Ga0059261_3859 +0.4 1.2 MgtC family compare
Ga0059261_1145 +0.4 1.0 flagella basal body P-ring formation protein FlgA compare
Ga0059261_1791 +0.4 0.9 hypothetical protein compare
Ga0059261_3197 +0.4 1.9 Acetyltransferases, including N-acetylases of ribosomal proteins compare
Ga0059261_3971 +0.4 0.7 Uncharacterized protein conserved in bacteria compare
Ga0059261_1318 +0.4 1.4 Uncharacterized MobA-related protein compare
Ga0059261_3432 +0.4 1.4 leucyl/phenylalanyl-tRNA--protein transferase compare
Ga0059261_2126 +0.4 1.8 ETC complex I subunit conserved region compare
Ga0059261_3934 +0.4 2.7 MoxR-like ATPases compare
Ga0059261_3013 +0.3 1.2 transcriptional regulator, ArsR family compare
Ga0059261_2063 +0.3 1.3 Flagellar biosynthesis protein, FliO compare
Ga0059261_1527 +0.3 0.6 hypothetical protein compare
Ga0059261_1278 +0.3 1.9 hypothetical protein compare
Ga0059261_3784 +0.3 3.0 DNA mismatch repair protein MutS compare
Ga0059261_1174 +0.3 1.6 Putative transposase of IS4/5 family (DUF4096) compare
Ga0059261_0526 +0.3 2.0 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases compare
Ga0059261_0251 +0.3 2.7 hypothetical protein compare
Ga0059261_2981 +0.3 3.1 Uncharacterized protein conserved in bacteria compare
Ga0059261_2018 +0.3 2.8 hypothetical protein compare
Ga0059261_2109 +0.3 1.1 hypothetical protein compare
Ga0059261_2057 +0.3 2.5 flagellar biosynthetic protein FliS compare
Ga0059261_3581 +0.3 2.3 Alpha/beta hydrolase family compare
Ga0059261_1438 +0.3 1.7 Membrane proteins related to metalloendopeptidases compare
Ga0059261_1717 +0.3 1.5 hypothetical protein compare
Ga0059261_3188 +0.3 2.9 Acetyltransferase (GNAT) domain compare
Ga0059261_4169 +0.3 1.5 Kef-type K+ transport system, predicted NAD-binding component compare
Ga0059261_4025 +0.3 0.6 Nucleotidyl transferase compare
Ga0059261_1713 +0.3 1.8 hypothetical protein compare
Ga0059261_3027 +0.3 1.4 Predicted transcriptional regulators compare
Ga0059261_3214 +0.3 2.2 hypothetical protein compare
Ga0059261_1381 +0.3 1.7 Membrane protease subunits, stomatin/prohibitin homologs compare
Ga0059261_0108 +0.3 2.2 hypothetical protein compare
Ga0059261_0464 +0.3 0.6 hypothetical protein compare
Ga0059261_3206 +0.3 2.0 ornithine carbamoyltransferase compare
Ga0059261_2713 +0.3 1.0 hypothetical protein compare
Ga0059261_3193 +0.3 3.0 Dolichyl-phosphate-mannose-protein mannosyltransferase compare
Ga0059261_2682 +0.3 2.1 Response regulator receiver domain compare
Ga0059261_2111 +0.3 2.9 Phosphodiesterase/alkaline phosphatase D compare
Ga0059261_4102 +0.3 2.4 Nucleoside-diphosphate-sugar epimerases compare
Ga0059261_3144 +0.3 1.1 Transcriptional regulator compare
Ga0059261_0633 +0.3 1.0 Acetyltransferases, including N-acetylases of ribosomal proteins compare
Ga0059261_2528 +0.3 1.5 Uncharacterized conserved protein compare
Ga0059261_2347 +0.3 1.1 hypothetical protein compare
Ga0059261_4007 +0.3 0.8 Transcriptional regulators compare
Ga0059261_1577 +0.3 2.8 L-glutamine and L-histidine transporter (from data) compare
Ga0059261_0316 +0.3 2.0 hypothetical protein compare
Ga0059261_3622 +0.3 1.9 hypothetical protein compare
Ga0059261_3139 +0.3 1.8 Predicted membrane protein compare
Ga0059261_2422 +0.3 1.7 Uncharacterized protein conserved in bacteria compare
Ga0059261_1957 +0.3 1.2 hypothetical protein compare
Ga0059261_0412 +0.3 1.0 DNA-binding HTH domain-containing proteins compare
Ga0059261_2387 +0.3 2.2 HIRAN domain compare
Ga0059261_1759 +0.3 1.3 Phosphoadenosine phosphosulfate reductase family compare
Ga0059261_2058 +0.3 2.5 Flagellar capping protein compare
Ga0059261_0933 +0.3 2.1 Molybdopterin biosynthesis enzyme compare
Ga0059261_3678 +0.3 1.7 Domain of unknown function (DUF4440) compare
Ga0059261_2393 +0.3 2.6 Predicted membrane protein compare
Ga0059261_3675 +0.3 1.3 Methyl-accepting chemotaxis protein compare
Ga0059261_1673 +0.3 2.3 transcriptional regulator, AraC family with amidase-like domain compare
Ga0059261_2746 +0.3 1.6 Predicted sugar nucleotidyltransferases compare
Ga0059261_2229 +0.3 1.1 Predicted transcriptional regulators compare
Ga0059261_0447 +0.3 1.6 SnoaL-like domain compare
Ga0059261_1837 +0.3 1.0 Staphylococcal nuclease homologue compare
Ga0059261_1937 +0.3 1.7 Protein of unknown function (DUF2807) compare
Ga0059261_2320 +0.3 1.6 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily compare
Ga0059261_1737 +0.3 1.7 hypothetical protein compare
Ga0059261_2060 +0.3 2.1 flagellar biosynthetic protein FliR compare
Ga0059261_3562 +0.3 1.3 Glycosyltransferase compare
Ga0059261_3716 +0.3 2.2 hypothetical protein compare
Ga0059261_0102 +0.3 2.2 endopeptidase La compare
Ga0059261_1610 +0.3 1.7 CBS domain/Transporter associated domain compare
Ga0059261_2144 +0.3 1.7 thymidine kinase (EC 2.7.1.21) compare
Ga0059261_2054 +0.3 2.1 Response regulator receiver domain compare
Ga0059261_3835 +0.3 1.5 Universal stress protein UspA and related nucleotide-binding proteins compare
Ga0059261_3646 +0.3 0.8 Uncharacterized stress protein (general stress protein 26) compare
Ga0059261_0671 +0.3 1.1 Uncharacterized conserved protein compare
Ga0059261_3203 +0.3 2.2 ABC-type multidrug transport system, permease component compare
Ga0059261_3204 +0.3 1.9 hypothetical protein compare
Ga0059261_0980 +0.3 1.9 polyhydroxyalkanoate synthesis repressor PhaR compare
Ga0059261_0306 +0.3 1.6 FOG: HPt domain compare
Ga0059261_3935 +0.3 2.2 hypothetical protein compare
Ga0059261_2709 +0.3 1.3 hypothetical protein compare
Ga0059261_2050 +0.3 1.1 hypothetical protein compare
Ga0059261_0268 +0.3 1.4 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily compare
Ga0059261_2298 +0.3 2.1 prephenate and/or arogenate dehydrogenase (EC 1.3.1.13) (from data) compare
Ga0059261_3970 +0.3 2.2 Predicted RNA polymerase sigma factor containing a TPR repeat domain compare
Ga0059261_4217 +0.3 0.7 hypothetical protein compare
Ga0059261_2112 +0.3 2.3 Transcriptional regulator compare
Ga0059261_3207 +0.3 1.3 Disulfide bond chaperones of the HSP33 family compare
Ga0059261_4192 +0.3 1.1 ATPases involved in chromosome partitioning compare
Ga0059261_3224 +0.3 1.9 Acyl dehydratase compare
Ga0059261_0812 +0.3 0.9 Short-chain alcohol dehydrogenase of unknown specificity compare
Ga0059261_3216 +0.3 1.0 Acetyltransferases compare
Ga0059261_0686 +0.3 2.0 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E compare
Ga0059261_2066 +0.3 2.3 Flagellar basal body-associated protein compare
Ga0059261_0974 +0.3 1.9 AraC-type DNA-binding domain-containing proteins compare


Specific Phenotypes

For 2 genes in this experiment

For stress MreB Perturbing Compound A22 in Sphingomonas koreensis DSMZ 15582

For stress MreB Perturbing Compound A22 across organisms