Experiment set5IT043 for Pseudomonas fluorescens FW300-N2E3

Compare to:

outer cut, LB soft agar motility assay

Genes with specific phenotypes:

  gene name fitness t score description  
AO353_18680 -2.8 -6.0 flagellar M-ring protein FliF conserved
AO353_18720 -2.8 -9.4 flagellar hook-length control protein conserved
AO353_01305 -2.8 -8.0 hypothetical protein conserved
AO353_18615 -2.8 -8.7 flagellar biosynthesis protein FlgJ compare
AO353_02845 -2.8 -14.2 flagellar biosynthesis protein FlgE conserved
AO353_02860 -2.8 -5.6 flagellar biosynthesis protein FlgB compare
AO353_02855 -2.7 -7.0 flagellar basal-body rod protein FlgC compare
AO353_00575 -2.7 -7.7 chemotaxis protein conserved
AO353_02875 -2.7 -8.2 flagellar biosynthesis protein FlgA compare
AO353_18685 -2.7 -7.2 flagellar motor switch protein FliG compare
AO353_18750 -2.6 -6.6 flagellar biosynthetic protein FliQ compare
AO353_18785 -2.6 -7.8 flagellar biosynthesis sigma factor conserved
AO353_18665 -2.4 -7.3 histidine kinase conserved
AO353_19275 -2.3 -5.3 histidine kinase compare
AO353_18625 -2.3 -10.1 flagellar biosynthesis protein FlgL conserved
AO353_20650 -2.2 -7.1 peptidoglycan-binding protein conserved
AO353_18645 -2.2 -11.5 flagellar cap protein FliD conserved
AO353_18660 -2.2 -8.4 AAA family ATPase compare
AO353_10825 -2.2 -11.7 hypothetical protein compare
AO353_18800 -2.2 -5.7 chemotaxis protein CheA conserved
AO353_02865 -2.1 -8.4 chemotaxis protein conserved
AO353_18695 -2.1 -7.0 flagellar protein export ATPase FliI conserved
AO353_18620 -2.1 -13.2 flagellar biosynthesis protein FlgK conserved
AO353_18650 -2.0 -6.6 flagellar export chaperone FliS conserved
AO353_17025 -2.0 -10.6 beta-agarase conserved
AO353_18675 -2.0 -5.3 flagellar hook-basal body protein FliE compare
AO353_18820 -2.0 -6.7 cobalamin biosynthesis protein CobQ conserved
AO353_18670 -1.9 -5.9 Fis family transcriptional regulator conserved
AO353_02850 -1.9 -5.9 flagellar biosynthesis protein FlgD compare
AO353_16415 -1.8 -7.1 beta-(1-3)-glucosyl transferase conserved
AO353_18805 -1.7 -5.0 chemotaxis protein CheY conserved
AO353_18760 -1.7 -6.1 flagellar biosynthetic protein FlhB conserved
AO353_12850 -1.6 -8.8 diguanylate cyclase compare
AO353_16760 -1.5 -5.1 baseplate protein compare
AO353_14230 -1.4 -6.3 ATP-dependent chaperone ClpB conserved
AO353_10480 -1.4 -6.4 recombinase RecF compare
AO353_19260 -1.3 -5.2 molybdenum cofactor biosynthesis protein MoaA compare
AO353_27295 -1.2 -5.7 phage tail protein compare
AO353_15430 -1.1 -5.1 chemotaxis protein CheW compare
AO353_03790 +1.2 6.4 hypothetical protein conserved
AO353_08805 +1.3 5.8 flagellar basal body protein FliL compare
AO353_18710 +1.5 10.0 chemotaxis protein CheY conserved
AO353_00695 +1.5 8.0 diguanylate cyclase conserved
AO353_11520 +1.6 5.8 diguanylate cyclase compare
AO353_09325 +1.6 6.3 histidine kinase compare
AO353_20465 +1.7 8.5 diguanylate cyclase compare
AO353_08085 +1.8 10.1 histidine kinase conserved
AO353_20380 +1.8 7.8 acyl-CoA dehydrogenase compare
AO353_19640 +1.8 5.6 chemotaxis protein CheY compare
AO353_08080 +2.0 6.8 chemotaxis protein compare
AO353_02125 +2.1 7.9 ABC transporter ATP-binding protein compare
AO353_13700 +2.3 14.6 diguanylate cyclase conserved
AO353_20615 +2.3 8.7 LysR family transcriptional regulator compare
AO353_12140 +2.4 5.2 hypothetical protein conserved
AO353_16035 +2.5 11.4 Lon protease compare
AO353_08090 +2.5 8.8 chemotaxis protein conserved
AO353_14025 +2.6 15.7 diguanylate phosphodiesterase compare
AO353_13090 +2.8 13.1 flagellar motor stator protein MotA conserved
AO353_18205 +3.0 11.8 histidine kinase conserved
AO353_15375 +3.3 17.2 deoxyribonuclease conserved
AO353_03965 +3.6 10.6 type IV secretion protein Rhs compare


Specific phenotypes for motility Agar across organisms