Experiment set5IT042 for Methanococcus maripaludis S2

Compare to:

Formate with sodium chlorite 3.125 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS01960 -1.6 -0.9 hypothetical protein compare
MMP_RS08930 -1.5 -1.6 hypothetical protein compare
MMP_RS02235 -1.2 -6.3 CBS domain-containing protein compare
MMP_RS04145 -1.2 -1.8 hypothetical protein compare
MMP_RS00655 -1.1 -3.0 hypothetical protein compare
MMP_RS05365 -1.1 -2.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS06860 -0.9 -1.8 4Fe-4S binding protein compare
MMP_RS07970 -0.9 -2.9 hypothetical protein compare
MMP_RS07845 -0.9 -2.0 LL-diaminopimelate aminotransferase compare
MMP_RS08390 -0.8 -4.1 DUF5400 domain-containing protein compare
MMP_RS00670 -0.8 -3.4 TIM barrel protein compare
MMP_RS02605 -0.8 -0.7 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS01105 -0.7 -3.2 hypothetical protein compare
MMP_RS05140 -0.7 -2.1 helix-turn-helix transcriptional regulator compare
MMP_RS02815 -0.7 -1.6 hypothetical protein compare
MMP_RS01645 -0.6 -1.5 SWIM zinc finger family protein compare
MMP_RS08940 -0.6 -0.8 MetS family NSS transporter small subunit compare
MMP_RS07380 -0.6 -1.0 transcription elongation factor Spt5 compare
MMP_RS01685 -0.6 -1.6 indolepyruvate oxidoreductase subunit beta compare
MMP_RS01150 -0.6 -2.1 aldo/keto reductase compare
MMP_RS03385 -0.6 -0.6 cation diffusion facilitator family transporter compare
MMP_RS01495 -0.6 -3.5 TraB/GumN family protein compare
MMP_RS00990 -0.6 -1.9 hypothetical protein compare
MMP_RS08380 -0.6 -2.3 phosphatase PAP2 family protein compare
MMP_RS05950 -0.5 -2.7 nickel-dependent hydrogenase large subunit compare
MMP_RS07735 -0.5 -0.5 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS04200 -0.5 -2.3 DUF111 family protein compare
MMP_RS07725 -0.5 -1.6 4Fe-4S dicluster domain-containing protein compare
MMP_RS00700 -0.5 -1.5 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS05985 -0.5 -1.5 hypothetical protein compare
MMP_RS00080 -0.5 -2.6 RecB-family nuclease compare
MMP_RS03440 -0.5 -0.6 MoaD/ThiS family protein compare
MMP_RS06710 -0.5 -1.8 selenium-binding protein compare
MMP_RS08345 -0.5 -2.8 4Fe-4S binding protein compare
MMP_RS02870 -0.5 -2.3 hypothetical protein compare
MMP_RS03965 -0.5 -1.1 hypothetical protein compare
MMP_RS01335 -0.5 -0.9 prefoldin subunit beta compare
MMP_RS01200 -0.5 -1.1 hypothetical protein compare
MMP_RS05965 -0.5 -2.2 carboxymuconolactone decarboxylase family protein compare
MMP_RS08235 -0.5 -2.7 hypothetical protein compare
MMP_RS01630 -0.5 -3.0 N-glycosylase/DNA lyase compare
MMP_RS06050 -0.5 -2.5 ZIP family metal transporter compare
MMP_RS02785 -0.5 -2.5 MarR family transcriptional regulator compare
MMP_RS01720 -0.5 -0.8 replication factor C large subunit compare
MMP_RS06575 -0.5 -1.3 fluoride efflux transporter CrcB compare
MMP_RS08990 -0.5 -1.8 hypothetical protein compare
MMP_RS00570 -0.5 -1.4 protein-L-isoaspartate O-methyltransferase compare
MMP_RS01260 -0.5 -1.5 HDIG domain-containing protein compare
MMP_RS06590 -0.5 -1.5 GNAT family N-acetyltransferase compare
MMP_RS01420 -0.4 -1.0 hypothetical protein compare
MMP_RS04735 -0.4 -1.8 tautomerase family protein compare
MMP_RS01780 -0.4 -1.9 TrmJ/YjtD family RNA methyltransferase compare
MMP_RS04945 -0.4 -2.1 hypothetical protein compare
MMP_RS07195 -0.4 -2.1 M20 family metallo-hydrolase compare
MMP_RS03490 -0.4 -0.8 DUF2115 domain-containing protein compare
MMP_RS02735 -0.4 -1.9 MBL fold metallo-hydrolase compare
MMP_RS06370 -0.4 -1.2 biotin synthase BioB compare
MMP_RS06395 -0.4 -0.8 ThiF family adenylyltransferase compare
MMP_RS07115 -0.4 -2.2 MBL fold metallo-hydrolase compare
MMP_RS01125 -0.4 -2.1 thioredoxin family protein compare
MMP_RS01055 -0.4 -1.7 hypothetical protein compare
MMP_RS00090 -0.4 -1.9 CoA-binding protein compare
MMP_RS00400 -0.4 -1.4 tributyrin esterase compare
MMP_RS00155 -0.4 -1.7 heavy metal-binding domain-containing protein compare
MMP_RS05315 -0.4 -0.5 hypothetical protein compare
MMP_RS00965 -0.4 -1.0 hypothetical protein compare
MMP_RS00395 -0.4 -0.7 MGMT family protein compare
MMP_RS08830 -0.4 -1.4 GTP-binding protein compare
MMP_RS04050 -0.4 -1.3 hypothetical protein compare
MMP_RS04305 -0.4 -1.1 hypothetical protein compare
MMP_RS08160 -0.4 -1.6 EamA family transporter compare
MMP_RS06870 -0.4 -1.2 DedA family protein compare
MMP_RS05505 -0.4 -2.3 class IV adenylate cyclase compare
MMP_RS01180 -0.4 -0.7 XTP/dITP diphosphatase compare
MMP_RS06545 -0.4 -1.6 ferredoxin family protein compare
MMP_RS00635 -0.4 -1.6 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS00950 -0.4 -1.5 site-2 protease family protein compare
MMP_RS08395 -0.4 -2.0 DsrE family protein compare
MMP_RS02405 -0.4 -1.7 hypothetical protein compare
MMP_RS03740 -0.4 -0.9 indolepyruvate oxidoreductase subunit beta compare
MMP_RS07815 -0.4 -0.6 DUF2120 domain-containing protein compare
MMP_RS01870 -0.4 -1.8 acyl-CoA dehydratase activase compare
MMP_RS03215 -0.4 -1.7 MBL fold metallo-hydrolase compare
MMP_RS03450 -0.4 -0.7 glycine synthesis protein GlyXS (from data) compare
MMP_RS00960 -0.4 -1.5 iron export ABC transporter permease subunit FetB compare
MMP_RS06215 -0.4 -1.2 30S ribosomal protein S6e compare
MMP_RS03655 -0.4 -1.3 DUF1894 domain-containing protein compare
MMP_RS07840 -0.3 -1.1 ribonuclease III compare
MMP_RS06190 -0.3 -1.4 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS06965 -0.3 -1.3 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS06430 -0.3 -1.2 6-carboxytetrahydropterin synthase QueD compare
MMP_RS08775 -0.3 -1.3 methanogenesis marker 9 domain-containing protein compare
MMP_RS02380 -0.3 -1.5 ATP-binding protein compare
MMP_RS06020 -0.3 -1.1 archaeoflavoprotein AfpA compare
MMP_RS07645 -0.3 -1.6 aldehyde dehydrogenase family protein compare
MMP_RS06110 -0.3 -0.8 ATP-dependent protease LonB compare
MMP_RS03315 -0.3 -0.4 ferrous iron transport protein A compare
MMP_RS02045 -0.3 -0.6 tRNA-Met compare
MMP_RS08835 -0.3 -1.3 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS08250 -0.3 -2.1 pyruvate kinase compare
MMP_RS02170 -0.3 -1.3 CBS domain-containing protein compare
MMP_RS05780 -0.3 -2.6 multidrug resistance efflux transporter family protein compare
MMP_RS08640 -0.3 -2.2 TIM barrel protein compare
MMP_RS01060 -0.3 -1.9 calcium/sodium antiporter compare
MMP_RS08975 -0.3 -1.6 hypothetical protein compare
MMP_RS08080 -0.3 -1.5 YchF/TatD family DNA exonuclease compare
MMP_RS06335 -0.3 -1.6 HAD family hydrolase compare
MMP_RS00705 -0.3 -0.8 hypothetical protein compare
MMP_RS08275 -0.3 -2.3 hypothetical protein compare
MMP_RS05035 -0.3 -1.5 hypothetical protein compare
MMP_RS02965 -0.3 -1.3 carboxymuconolactone decarboxylase family protein compare
MMP_RS08360 -0.3 -1.1 hypothetical protein compare
MMP_RS02230 -0.3 -1.6 sodium-dependent transporter compare
MMP_RS05835 -0.3 -0.3 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS08840 -0.3 -1.3 class I SAM-dependent methyltransferase compare
MMP_RS06300 -0.3 -1.3 ABC transporter substrate-binding protein compare
MMP_RS02300 -0.3 -1.4 NAD(P)H-dependent oxidoreductase compare
MMP_RS08105 -0.3 -1.3 6-carboxyhexanoate--CoA ligase compare
MMP_RS01675 -0.3 -0.5 hypothetical protein compare
MMP_RS05115 -0.3 -1.7 50S ribosomal protein L11 methyltransferase compare
MMP_RS06585 -0.3 -0.6 DMT family protein compare
MMP_RS08240 -0.3 -1.0 methanogenesis marker 16 metalloprotein compare
MMP_RS01805 -0.3 -0.5 NUDIX hydrolase compare
MMP_RS07410 -0.3 -1.5 4-demethylwyosine synthase TYW1 compare
MMP_RS06185 -0.3 -1.2 thermonuclease family protein compare
MMP_RS04850 -0.3 -2.1 UPF0254 family protein compare
MMP_RS02400 -0.3 -1.8 site-2 protease family protein compare
MMP_RS01550 -0.3 -1.4 DUF1624 domain-containing protein compare
MMP_RS06490 -0.3 -1.2 hypothetical protein compare
MMP_RS04220 -0.3 -1.6 queuosine precursor transporter compare
MMP_RS02840 -0.3 -0.9 DUF123 domain-containing protein compare
MMP_RS01255 -0.3 -1.7 amino acid ABC transporter ATP-binding protein compare
MMP_RS01430 -0.3 -1.2 mechanosensitive ion channel family protein compare
MMP_RS04325 -0.3 -1.4 MtaA/CmuA family methyltransferase compare
MMP_RS00085 -0.3 -1.6 DNA cytosine methyltransferase compare
MMP_RS00940 -0.3 -1.2 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS07985 -0.3 -1.9 nitroreductase family protein compare
MMP_RS05065 -0.3 -0.6 CooT family nickel-binding protein compare
MMP_RS08400 -0.3 -0.7 MJ0307 family thioredoxin compare
MMP_RS02215 -0.3 -1.6 ECF transporter S component compare
MMP_RS00795 -0.3 -1.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01135 -0.3 -1.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS06440 -0.3 -1.1 CBS domain-containing protein compare
MMP_RS06305 -0.3 -1.3 transporter substrate-binding domain-containing protein compare
MMP_RS02680 -0.3 -1.7 ABC transporter permease compare
MMP_RS04875 -0.3 -0.6 energy-converting hydrogenase B subunit P compare
MMP_RS03090 -0.3 -1.2 cation:proton antiporter compare
MMP_RS01790 -0.3 -1.6 restriction endonuclease compare
MMP_RS08340 -0.3 -1.0 4Fe-4S binding protein compare
MMP_RS01275 -0.3 -1.2 class III signal peptide-containing protein compare
MMP_RS04125 -0.3 -0.9 TetR/AcrR family transcriptional regulator compare
MMP_RS00675 -0.2 -0.3 nitroreductase family protein compare
MMP_RS00035 -0.2 -1.5 DUF2098 family protein compare
MMP_RS02110 -0.2 -0.6 hypothetical protein compare
MMP_RS07640 -0.2 -0.8 mechanosensitive ion channel family protein compare
MMP_RS08995 -0.2 -0.4 hypothetical protein compare
MMP_RS00735 -0.2 -0.8 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08280 -0.2 -0.7 proteasome assembly chaperone family protein compare
MMP_RS06115 -0.2 -1.4 class II aldolase/adducin family protein compare
MMP_RS05595 -0.2 -1.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08200 -0.2 -1.8 archaeosine synthase subunit alpha compare
MMP_RS03555 -0.2 -1.0 transcriptional regulator compare
MMP_RS03840 -0.2 -1.1 hypothetical protein compare
MMP_RS08350 -0.2 -0.3 hypothetical protein compare
MMP_RS02695 -0.2 -1.5 formylmethanofuran dehydrogenase subunit A compare
MMP_RS05490 -0.2 -1.0 IMPACT family protein compare
MMP_RS07700 -0.2 -1.3 DUF1188 domain-containing protein compare
MMP_RS00545 -0.2 -0.9 XRE family transcriptional regulator compare
MMP_RS01640 -0.2 -1.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS02020 -0.2 -1.0 gamma-glutamylcyclotransferase compare
MMP_RS00760 -0.2 -1.3 branched-chain-amino-acid transaminase compare
MMP_RS02625 -0.2 -1.1 ribonuclease H-like domain-containing protein compare
MMP_RS04165 -0.2 -0.9 TetR/AcrR family transcriptional regulator compare
MMP_RS05000 -0.2 -1.3 FmdE family protein compare
MMP_RS01890 -0.2 -0.7 nucleotide sugar dehydrogenase compare
MMP_RS02410 -0.2 -0.7 ABC transporter substrate-binding protein compare
MMP_RS07770 -0.2 -0.9 alanine racemase compare
MMP_RS06015 -0.2 -1.6 flavodoxin family protein compare
MMP_RS03340 -0.2 -0.2 ABC transporter ATP-binding protein compare
MMP_RS02875 -0.2 -1.0 chorismate pyruvate-lyase family protein compare
MMP_RS05995 -0.2 -1.2 FprA family A-type flavoprotein compare
MMP_RS06570 -0.2 -0.4 DUF190 domain-containing protein compare
MMP_RS02740 -0.2 -0.7 hypothetical protein compare
MMP_RS02370 -0.2 -1.1 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS05550 -0.2 -0.2 cation:proton antiporter compare
MMP_RS05355 -0.2 -0.2 hypothetical protein compare
MMP_RS04320 -0.2 -1.4 uroporphyrinogen decarboxylase family protein compare
MMP_RS05770 -0.2 -1.0 YkgJ family cysteine cluster protein compare
MMP_RS05865 -0.2 -0.6 hypothetical protein compare
MMP_RS03435 -0.2 -0.4 ketol-acid reductoisomerase compare
MMP_RS09020 -0.2 -0.4 hypothetical protein compare
MMP_RS01450 -0.2 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
MMP_RS08335 -0.2 -0.9 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS03065 -0.2 -0.3 AzlC family ABC transporter permease compare
MMP_RS05895 -0.2 -1.4 metallophosphoesterase compare
MMP_RS05940 -0.2 -0.8 corrinoid protein compare
MMP_RS00430 -0.2 -0.8 hypothetical protein compare
MMP_RS01485 -0.2 -1.3 right-handed parallel beta-helix repeat-containing protein compare
MMP_RS07620 -0.2 -0.9 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01145 -0.2 -0.9 ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Sodium Chlorite across organisms