Experiment set5IT041 for Methanococcus maripaludis S2

Compare to:

Formate with sodium chlorite 3.125 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS03340 -3.5 -1.4 ABC transporter ATP-binding protein compare
MMP_RS07555 -2.1 -1.2 monovalent cation/H+ antiporter subunit E compare
MMP_RS03960 -2.0 -1.1 hypothetical protein compare
MMP_RS04055 -1.4 -2.0 hypothetical protein compare
MMP_RS00655 -1.3 -2.0 hypothetical protein compare
MMP_RS03300 -1.2 -1.1 TOBE domain-containing protein compare
MMP_RS07845 -1.0 -2.8 LL-diaminopimelate aminotransferase compare
MMP_RS02235 -1.0 -6.8 CBS domain-containing protein compare
MMP_RS04015 -1.0 -1.7 hypothetical protein compare
MMP_RS06600 -1.0 -1.2 class III signal peptide-containing protein compare
MMP_RS07890 -1.0 -2.3 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS07835 -0.8 -2.8 TldD/PmbA family protein compare
MMP_RS04305 -0.8 -1.6 hypothetical protein compare
MMP_RS02175 -0.7 -0.6 DUF1611 domain-containing protein compare
MMP_RS03800 -0.7 -3.0 hypothetical protein compare
MMP_RS02190 -0.7 -1.9 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS05550 -0.7 -0.6 cation:proton antiporter compare
MMP_RS04100 -0.7 -1.3 hypothetical protein compare
MMP_RS07350 -0.7 -1.2 preprotein translocase subunit Sec61beta compare
MMP_RS07725 -0.6 -1.3 4Fe-4S dicluster domain-containing protein compare
MMP_RS01100 -0.6 -1.2 ABC transporter ATP-binding protein compare
MMP_RS06590 -0.6 -2.1 GNAT family N-acetyltransferase compare
MMP_RS01005 -0.6 -0.9 riboflavin synthase compare
MMP_RS07815 -0.6 -1.0 DUF2120 domain-containing protein compare
MMP_RS08340 -0.6 -1.8 4Fe-4S binding protein compare
MMP_RS01385 -0.6 -0.4 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02380 -0.6 -2.6 ATP-binding protein compare
MMP_RS02370 -0.6 -2.4 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS02490 -0.6 -1.8 hypothetical protein compare
MMP_RS08460 -0.5 -1.1 proteasome-activating nucleotidase compare
MMP_RS06870 -0.5 -2.9 DedA family protein compare
MMP_RS08725 -0.5 -1.1 Ni/Fe hydrogenase subunit alpha compare
MMP_RS02605 -0.5 -0.6 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS05315 -0.5 -1.3 hypothetical protein compare
MMP_RS07435 -0.5 -0.9 GMP synthase subunit A compare
MMP_RS08350 -0.5 -0.6 hypothetical protein compare
MMP_RS05110 -0.5 -2.2 16S ribosomal RNA methyltransferase A compare
MMP_RS08390 -0.5 -1.8 DUF5400 domain-containing protein compare
MMP_RS01110 -0.5 -2.4 FmdE family protein compare
MMP_RS08165 -0.5 -1.3 phosphoglycerate dehydrogenase compare
MMP_RS00665 -0.5 -1.9 hypothetical protein compare
MMP_RS01775 -0.5 -0.9 TIGR00297 family protein compare
MMP_RS02045 -0.5 -0.9 tRNA-Met compare
MMP_RS04325 -0.5 -2.1 MtaA/CmuA family methyltransferase compare
MMP_RS03965 -0.5 -1.2 hypothetical protein compare
MMP_RS05835 -0.5 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS07625 -0.5 -1.5 cobalt ECF transporter T component CbiQ compare
MMP_RS00700 -0.5 -2.8 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01655 -0.5 -1.5 DsrE family protein compare
MMP_RS00950 -0.5 -2.5 site-2 protease family protein compare
MMP_RS05970 -0.5 -1.5 class II SORL domain-containing protein compare
MMP_RS08380 -0.4 -2.2 phosphatase PAP2 family protein compare
MMP_RS00830 -0.4 -1.5 purine phosphoribosyltransferase family protein compare
MMP_RS07095 -0.4 -1.3 PspC domain-containing protein compare
MMP_RS01790 -0.4 -2.2 restriction endonuclease compare
MMP_RS01495 -0.4 -2.6 TraB/GumN family protein compare
MMP_RS00570 -0.4 -1.5 protein-L-isoaspartate O-methyltransferase compare
MMP_RS05140 -0.4 -1.6 helix-turn-helix transcriptional regulator compare
MMP_RS04060 -0.4 -2.5 hypothetical protein compare
MMP_RS03490 -0.4 -0.9 DUF2115 domain-containing protein compare
MMP_RS08335 -0.4 -2.1 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS04190 -0.4 -2.8 hypothetical protein compare
MMP_RS00080 -0.4 -1.8 RecB-family nuclease compare
MMP_RS01570 -0.4 -0.7 hypothetical protein compare
MMP_RS03465 -0.4 -0.5 adenine phosphoribosyltransferase compare
MMP_RS01430 -0.4 -2.4 mechanosensitive ion channel family protein compare
MMP_RS07620 -0.4 -1.5 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS00730 -0.4 -1.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06185 -0.4 -1.5 thermonuclease family protein compare
MMP_RS01630 -0.4 -2.1 N-glycosylase/DNA lyase compare
MMP_RS05965 -0.4 -1.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS06710 -0.4 -1.6 selenium-binding protein compare
MMP_RS04875 -0.4 -1.6 energy-converting hydrogenase B subunit P compare
MMP_RS01250 -0.4 -1.5 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS07425 -0.4 -1.5 GTP-binding protein compare
MMP_RS02595 -0.4 -0.6 putative zinc-binding protein compare
MMP_RS06140 -0.4 -1.5 radical SAM protein compare
MMP_RS03735 -0.4 -1.9 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06190 -0.4 -1.5 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS01180 -0.4 -0.8 XTP/dITP diphosphatase compare
MMP_RS03740 -0.4 -1.3 indolepyruvate oxidoreductase subunit beta compare
MMP_RS00085 -0.4 -2.2 DNA cytosine methyltransferase compare
MMP_RS06150 -0.4 -2.2 hypothetical protein compare
MMP_RS06225 -0.4 -2.1 DNA double-strand break repair nuclease NurA compare
MMP_RS00735 -0.4 -1.0 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS05155 -0.4 -1.8 hypothetical protein compare
MMP_RS07880 -0.4 -2.3 AAA family ATPase compare
MMP_RS07630 -0.4 -0.6 ATP-binding cassette domain-containing protein compare
MMP_RS05665 -0.4 -1.4 phosphate ABC transporter permease subunit PstC compare
MMP_RS08345 -0.4 -2.5 4Fe-4S binding protein compare
MMP_RS07840 -0.4 -1.2 ribonuclease III compare
MMP_RS01685 -0.4 -1.2 indolepyruvate oxidoreductase subunit beta compare
MMP_RS07195 -0.4 -1.7 M20 family metallo-hydrolase compare
MMP_RS03895 -0.3 -0.9 hypothetical protein compare
MMP_RS01635 -0.3 -1.6 thiamine pyrophosphate-dependent enzyme compare
MMP_RS00545 -0.3 -1.0 XRE family transcriptional regulator compare
MMP_RS05355 -0.3 -0.4 hypothetical protein compare
MMP_RS06370 -0.3 -1.1 biotin synthase BioB compare
MMP_RS00395 -0.3 -0.7 MGMT family protein compare
MMP_RS01200 -0.3 -1.2 hypothetical protein compare
MMP_RS03480 -0.3 -2.1 SulP family inorganic anion transporter compare
MMP_RS00670 -0.3 -1.6 TIM barrel protein compare
MMP_RS05975 -0.3 -0.6 hypothetical protein compare
MMP_RS00345 -0.3 -1.6 DUF2666 domain-containing protein compare
MMP_RS01125 -0.3 -1.5 thioredoxin family protein compare
MMP_RS00705 -0.3 -1.0 hypothetical protein compare
MMP_RS03220 -0.3 -1.0 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS00515 -0.3 -0.4 DUF655 domain-containing protein compare
MMP_RS08400 -0.3 -1.4 MJ0307 family thioredoxin compare
MMP_RS02740 -0.3 -0.9 hypothetical protein compare
MMP_RS06760 -0.3 -1.2 hypothetical protein compare
MMP_RS04145 -0.3 -0.6 hypothetical protein compare
MMP_RS04120 -0.3 -2.1 hypothetical protein compare
MMP_RS07115 -0.3 -1.6 MBL fold metallo-hydrolase compare
MMP_RS00400 -0.3 -1.0 tributyrin esterase compare
MMP_RS08580 -0.3 -1.9 flagellin compare
MMP_RS02560 -0.3 -1.5 DUF2283 domain-containing protein compare
MMP_RS00960 -0.3 -1.4 iron export ABC transporter permease subunit FetB compare
MMP_RS05490 -0.3 -1.2 IMPACT family protein compare
MMP_RS08750 -0.3 -1.0 hypothetical protein compare
MMP_RS05365 -0.3 -0.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08670 -0.3 -1.3 metallophosphoesterase compare
MMP_RS08615 -0.3 -0.8 flagellar protein G compare
MMP_RS07640 -0.3 -1.5 mechanosensitive ion channel family protein compare
MMP_RS00090 -0.3 -1.4 CoA-binding protein compare
MMP_RS01415 -0.3 -1.2 DUF2067 domain-containing protein compare
MMP_RS08370 -0.3 -0.2 cation:proton antiporter subunit C compare
MMP_RS08245 -0.3 -1.3 DUF4013 domain-containing protein compare
MMP_RS02690 -0.3 -1.6 FmdE family protein compare
MMP_RS06250 -0.3 -1.7 hypothetical protein compare
MMP_RS08830 -0.3 -1.5 GTP-binding protein compare
MMP_RS08095 -0.3 -1.3 dethiobiotin synthase compare
MMP_RS07145 -0.3 -1.4 AmmeMemoRadiSam system protein B compare
MMP_RS07645 -0.3 -1.6 aldehyde dehydrogenase family protein compare
MMP_RS04050 -0.3 -0.6 hypothetical protein compare
MMP_RS02495 -0.3 -0.9 hypothetical protein compare
MMP_RS08940 -0.3 -0.4 MetS family NSS transporter small subunit compare
MMP_RS01020 -0.3 -0.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06300 -0.3 -1.3 ABC transporter substrate-binding protein compare
MMP_RS03450 -0.3 -0.6 glycine synthesis protein GlyXS (from data) compare
MMP_RS00430 -0.3 -1.3 hypothetical protein compare
MMP_RS03325 -0.3 -1.7 hypothetical protein compare
MMP_RS04405 -0.3 -1.9 hypothetical protein compare
MMP_RS06015 -0.3 -1.6 flavodoxin family protein compare
MMP_RS01280 -0.3 -1.6 DUF515 domain-containing protein compare
MMP_RS06070 -0.3 -1.9 iron ABC transporter substrate-binding protein compare
MMP_RS00795 -0.3 -1.5 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS07150 -0.3 -1.1 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08640 -0.3 -1.7 TIM barrel protein compare
MMP_RS06000 -0.3 -0.8 divalent-cation tolerance protein CutA compare
MMP_RS05700 -0.3 -1.5 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS08360 -0.3 -0.7 hypothetical protein compare
MMP_RS08225 -0.3 -1.7 RimK family alpha-L-glutamate ligase compare
MMP_RS01440 -0.3 -0.7 NAAT family transporter compare
MMP_RS08990 -0.3 -1.6 hypothetical protein compare
MMP_RS00965 -0.3 -0.8 hypothetical protein compare
MMP_RS05875 -0.3 -0.6 hydroxyethylthiazole kinase compare
MMP_RS08415 -0.3 -0.4 radical SAM protein compare
MMP_RS03495 -0.3 -1.3 Na/Pi cotransporter family protein compare
MMP_RS07615 -0.3 -1.4 energy-coupling factor ABC transporter permease compare
MMP_RS02785 -0.3 -1.3 MarR family transcriptional regulator compare
MMP_RS00685 -0.2 -0.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS04125 -0.2 -1.0 TetR/AcrR family transcriptional regulator compare
MMP_RS07905 -0.2 -1.4 DUF3343 domain-containing protein compare
MMP_RS06325 -0.2 -0.4 hypothetical protein compare
MMP_RS04415 -0.2 -1.4 peptide-methionine (S)-S-oxide reductase MsrA compare
MMP_RS02890 -0.2 -0.7 TIGR00296 family protein compare
MMP_RS08690 -0.2 -1.3 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 compare
MMP_RS08090 -0.2 -1.1 hypothetical protein compare
MMP_RS01195 -0.2 -0.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07915 -0.2 -1.0 DUF4870 domain-containing protein compare
MMP_RS07795 -0.2 -1.7 site-2 protease family protein compare
MMP_RS06495 -0.2 -0.8 YkgJ family cysteine cluster protein compare
MMP_RS02195 -0.2 -0.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03985 -0.2 -1.6 hypothetical protein compare
MMP_RS01260 -0.2 -0.5 HDIG domain-containing protein compare
MMP_RS04355 -0.2 -1.6 ribonuclease H family protein compare
MMP_RS02965 -0.2 -0.9 carboxymuconolactone decarboxylase family protein compare
MMP_RS04945 -0.2 -1.4 hypothetical protein compare
MMP_RS01965 -0.2 -1.0 DUF1616 domain-containing protein compare
MMP_RS00325 -0.2 -0.2 RNA-binding protein compare
MMP_RS01320 -0.2 -1.5 hypothetical protein compare
MMP_RS04205 -0.2 -0.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS04745 -0.2 -1.6 proteasome assembly chaperone family protein compare
MMP_RS00315 -0.2 -0.9 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03950 -0.2 -1.2 HNH endonuclease compare
MMP_RS03120 -0.2 -0.8 hypothetical protein compare
MMP_RS08100 -0.2 -0.9 8-amino-7-oxononanoate synthase compare
MMP_RS02230 -0.2 -1.4 sodium-dependent transporter compare
MMP_RS08275 -0.2 -1.5 hypothetical protein compare
MMP_RS08290 -0.2 -1.0 DNA-binding protein Alba compare
MMP_RS04210 -0.2 -1.6 aldo/keto reductase compare
MMP_RS01765 -0.2 -1.0 HIT family protein compare
MMP_RS00880 -0.2 -0.5 ribosome assembly RNA-binding protein YhbY compare
MMP_RS00565 -0.2 -0.8 CBS domain-containing protein compare
MMP_RS05460 -0.2 -1.0 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS02830 -0.2 -1.6 DUF432 domain-containing protein compare
MMP_RS00660 -0.2 -1.2 alkaline phosphatase family protein compare
MMP_RS08835 -0.2 -1.4 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS05780 -0.2 -1.3 multidrug resistance efflux transporter family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Sodium Chlorite across organisms