Experiment set5IT038 for Klebsiella michiganensis M5al

Compare to:

D-Ribose carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -8.1 -5.6 colicin V production protein compare
BWI76_RS21475 -8.1 -5.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18955 -8.1 -5.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS04675 -7.7 -5.4 3-isopropylmalate dehydrogenase compare
BWI76_RS01655 -7.6 -9.0 homoserine O-succinyltransferase compare
BWI76_RS04645 -7.2 -5.0 3-dehydroquinase compare
BWI76_RS05840 -7.0 -4.8 glutamate 5-kinase compare
BWI76_RS04160 -6.8 -7.6 phosphoserine phosphatase compare
BWI76_RS04465 -6.8 -4.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS20350 -6.5 -7.1 amidophosphoribosyltransferase compare
BWI76_RS05015 -6.4 -4.4 transcriptional regulator compare
BWI76_RS18940 -6.4 -5.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS18935 -6.2 -7.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00835 -6.1 -13.0 phosphoenolpyruvate carboxylase compare
BWI76_RS00980 -6.1 -10.9 PLP-dependent threonine dehydratase compare
BWI76_RS04670 -6.0 -10.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04685 -6.0 -11.5 putative leucine operon leader peptide compare
BWI76_RS00855 -6.0 -8.2 argininosuccinate lyase compare
BWI76_RS00805 -5.9 -6.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS23360 -5.9 -4.1 diaminopimelate decarboxylase compare
BWI76_RS04680 -5.9 -13.7 2-isopropylmalate synthase compare
BWI76_RS04470 -5.9 -11.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS08385 -5.8 -3.3 citrate (Si)-synthase compare
BWI76_RS18950 -5.8 -6.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00845 -5.8 -10.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS20965 -5.7 -6.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS07065 -5.7 -9.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS26085 -5.7 -3.9 3-dehydroquinate synthase compare
BWI76_RS20895 -5.6 -6.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04250 -5.6 -7.3 homoserine kinase compare
BWI76_RS23220 -5.5 -8.4 amino-acid N-acetyltransferase compare
BWI76_RS27385 -5.5 -6.5 orotate phosphoribosyltransferase compare
BWI76_RS11965 -5.5 -4.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04665 -5.5 -20.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18920 -5.5 -4.1 ATP phosphoribosyltransferase compare
BWI76_RS01615 -5.4 -12.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09755 -5.4 -9.6 phosphoserine transaminase compare
BWI76_RS23920 -5.3 -6.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18930 -5.3 -6.2 histidinol-phosphate transaminase compare
BWI76_RS04245 -5.3 -12.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS11840 -5.3 -2.7 tryptophan synthase subunit alpha compare
BWI76_RS02995 -5.2 -8.4 aspartate carbamoyltransferase compare
BWI76_RS00990 -5.2 -6.3 ketol-acid reductoisomerase compare
BWI76_RS11850 -5.1 -9.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00850 -5.1 -10.2 acetylglutamate kinase compare
BWI76_RS00785 -5.0 -6.9 cystathionine gamma-synthase compare
BWI76_RS18925 -5.0 -7.3 histidinol dehydrogenase compare
BWI76_RS00975 -5.0 -7.9 dihydroxy-acid dehydratase compare
BWI76_RS09645 -4.9 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS01210 -4.9 -3.8 tyrosine recombinase XerC compare
BWI76_RS24285 -4.9 -9.1 cystathionine beta-lyase compare
BWI76_RS05835 -4.8 -3.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS11855 -4.8 -8.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS23365 -4.7 -8.4 LysR family transcriptional regulator compare
BWI76_RS22755 -4.7 -5.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS21265 -4.6 -12.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04255 -4.6 -11.7 threonine synthase compare
BWI76_RS04270 -4.5 -6.8 transaldolase compare
BWI76_RS25115 -4.4 -9.3 argininosuccinate synthase compare
BWI76_RS00985 -4.4 -7.0 transcriptional regulator IlvY compare
BWI76_RS03010 -4.4 -8.0 ornithine carbamoyltransferase compare
BWI76_RS22760 -4.4 -7.7 sulfite reductase subunit beta compare
BWI76_RS23240 -4.1 -2.9 exonuclease V subunit gamma compare
BWI76_RS11860 -4.1 -8.7 anthranilate synthase component I compare
BWI76_RS04240 -4.0 -2.7 thr operon leader peptide compare
BWI76_RS09660 -3.8 -2.6 DNA translocase FtsK compare
BWI76_RS07070 -3.8 -7.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS09910 -3.7 -15.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS01610 -3.7 -6.1 phosphoribosylamine--glycine ligase compare
BWI76_RS00400 -3.6 -2.3 glutamine synthetase compare
BWI76_RS11845 -3.5 -3.4 tryptophan synthase subunit beta compare
BWI76_RS23230 -3.4 -2.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS27390 -3.4 -5.0 ribonuclease PH compare
BWI76_RS00285 -3.4 -8.6 D-ribose ABC transporter substrate-binding protein conserved
BWI76_RS06185 -3.3 -7.9 shikimate kinase II compare
BWI76_RS00270 -3.3 -5.3 D-ribose pyranase (EC 5.4.99.62) (from data) conserved
BWI76_RS02735 -3.2 -5.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS22765 -3.2 -12.9 sulfite reductase subunit alpha compare
BWI76_RS21465 -3.1 -2.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00290 -3.1 -8.9 Ribokinase (EC 2.7.1.15) (from data) conserved
BWI76_RS05200 -3.1 -3.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS01185 -3.0 -2.8 adenylate cyclase compare
BWI76_RS10990 -2.9 -2.4 dihydroorotase compare
BWI76_RS09760 -2.8 -3.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS25645 -2.8 -7.1 shikimate dehydrogenase compare
BWI76_RS22690 -2.8 -2.4 adenylyl-sulfate kinase compare
BWI76_RS27430 -2.7 -2.1 (p)ppGpp synthetase compare
BWI76_RS08405 -2.7 -3.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS09670 -2.6 -3.0 recombination factor protein RarA compare
BWI76_RS15825 -2.6 -2.1 hypothetical protein compare
BWI76_RS26460 -2.5 -3.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS20970 -2.5 -2.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS23480 -2.4 -13.9 EAL domain-containing protein compare
BWI76_RS23895 -2.4 -2.3 Xaa-Pro aminopeptidase compare
BWI76_RS01200 -2.3 -3.0 diaminopimelate epimerase compare
BWI76_RS00275 -2.3 -8.7 ribose ABC transporter ATP-binding protein RbsA conserved
BWI76_RS26455 -2.2 -4.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS20435 -2.2 -1.6 chorismate synthase compare
BWI76_RS25960 -2.2 -3.5 NUDIX hydrolase compare
BWI76_RS17300 -2.1 -2.4 tRNA-Tyr compare
BWI76_RS22240 -2.0 -8.2 transcriptional regulator compare
BWI76_RS20650 -2.0 -2.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS02410 -1.9 -2.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS26075 -1.9 -3.1 DNA adenine methylase compare
BWI76_RS00280 -1.9 -5.3 ribose ABC transporter permease conserved
BWI76_RS20440 -1.8 -2.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS02530 -1.8 -2.5 tRNA dimethylallyltransferase compare
BWI76_RS24900 -1.8 -1.9 DeoR family transcriptional regulator compare
BWI76_RS26055 -1.8 -6.4 siroheme synthase compare
BWI76_RS19840 -1.7 -1.6 hypothetical protein compare
BWI76_RS04510 -1.7 -2.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS00965 -1.7 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS22420 -1.7 -2.9 LacI family transcriptional regulator compare
BWI76_RS20150 -1.6 -2.7 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS00390 -1.6 -3.7 two-component system sensor histidine kinase NtrB compare
BWI76_RS26000 -1.6 -4.2 aspartate aminotransferase family protein compare
BWI76_RS27440 -1.6 -3.5 DNA helicase RecG compare
BWI76_RS22805 -1.6 -7.2 GTP diphosphokinase compare
BWI76_RS21310 -1.6 -1.3 DNA repair protein RecO compare
BWI76_RS25320 -1.5 -5.6 glutamate synthase compare
BWI76_RS00180 -1.5 -1.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17720 -1.4 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS06765 -1.4 -4.1 transcriptional regulator compare
BWI76_RS09635 -1.3 -2.6 amino acid ABC transporter ATP-binding protein compare
BWI76_RS15195 -1.3 -2.1 DUF4186 domain-containing protein compare
BWI76_RS19010 -1.3 -2.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS11435 -1.3 -1.2 hypothetical protein compare
BWI76_RS16275 -1.2 -2.2 fumarate hydratase FumA compare
BWI76_RS00345 -1.2 -2.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS15830 -1.2 -2.2 hypothetical protein compare
BWI76_RS09625 -1.2 -1.5 hypothetical protein compare
BWI76_RS08980 -1.2 -1.2 DNA starvation/stationary phase protection protein compare
BWI76_RS20640 -1.2 -4.1 cysteine synthase A compare
BWI76_RS00960 -1.1 -5.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS12340 -1.1 -2.5 molecular chaperone Tir compare
BWI76_RS14435 -1.1 -1.1 glutamine ABC transporter ATP-binding protein compare
BWI76_RS19690 -1.1 -1.3 LysR family transcriptional regulator compare
BWI76_RS25315 -1.1 -6.5 glutamate synthase large subunit compare
BWI76_RS18565 -1.1 -2.8 pemk protein compare
BWI76_RS16445 -1.1 -2.6 auxiliary transporter membrane fusion protein compare
BWI76_RS04095 -1.1 -2.4 dUMP phosphatase compare
BWI76_RS02180 -1.1 -1.3 hypothetical protein compare
BWI76_RS22235 -1.1 -2.2 transcriptional regulator GutM compare
BWI76_RS00385 -1.1 -5.8 nitrogen assimilation regulatory protein compare
BWI76_RS25070 -1.1 -1.3 hypothetical protein compare
BWI76_RS17290 -1.1 -4.2 formyltetrahydrofolate deformylase compare
BWI76_RS21450 -1.1 -1.7 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS02610 -1.1 -4.2 transcriptional regulator compare
BWI76_RS26620 -1.1 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS26570 -1.1 -2.0 anion permease compare
BWI76_RS27170 -1.1 -5.8 MltR family transcriptional regulator compare
BWI76_RS03225 -1.1 -4.5 transcriptional regulator compare
BWI76_RS27075 -1.1 -3.8 IclR family transcriptional regulator compare
BWI76_RS21945 -1.0 -2.0 LysR family transcriptional regulator compare
BWI76_RS17155 -1.0 -1.6 hypothetical protein compare
BWI76_RS03235 -1.0 -7.9 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS08395 -1.0 -1.7 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS03415 -1.0 -3.8 LacI family transcriptional regulator compare
BWI76_RS07120 -1.0 -5.4 LacI family transcriptional regulator compare
BWI76_RS10835 -1.0 -1.4 hypothetical protein compare
BWI76_RS15060 -1.0 -2.3 MarR family transcriptional regulator compare
BWI76_RS06015 -1.0 -1.5 hypothetical protein compare
BWI76_RS15980 -1.0 -1.8 lysine transporter LysE compare
BWI76_RS00710 -1.0 -1.2 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS20155 -1.0 -1.4 NADH-quinone oxidoreductase subunit I compare
BWI76_RS19460 -1.0 -1.8 lipoprotein compare
BWI76_RS15650 -1.0 -3.0 gp5 compare
BWI76_RS23265 -1.0 -1.8 hypothetical protein compare
BWI76_RS15810 -1.0 -4.0 hypothetical protein compare
BWI76_RS06340 -1.0 -1.1 hypothetical protein compare
BWI76_RS16315 -1.0 -1.7 SirA-like protein compare
BWI76_RS22695 -0.9 -3.7 sulfate adenylyltransferase compare
BWI76_RS26890 -0.9 -1.1 hypothetical protein compare
BWI76_RS19705 -0.9 -2.9 kinase compare
BWI76_RS01220 -0.9 -3.5 DNA-dependent helicase II compare
BWI76_RS05260 -0.9 -1.3 chaperone compare
BWI76_RS01935 -0.9 -1.0 thiamin phosphate synthase compare
BWI76_RS00140 -0.9 -1.0 phosphate transport system regulator PhoU compare
BWI76_RS26395 -0.9 -3.6 cell division protein FtsE compare
BWI76_RS15835 -0.9 -0.6 hypothetical protein compare
BWI76_RS06810 -0.9 -2.0 hypothetical protein compare
BWI76_RS02680 -0.9 -2.2 EamA family transporter compare
BWI76_RS15900 -0.9 -2.1 hypothetical protein compare
BWI76_RS06295 -0.9 -3.2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS18055 -0.9 -1.5 copper resistance protein D compare
BWI76_RS13180 -0.9 -2.3 multidrug transporter EmrA compare
BWI76_RS27940 -0.9 -1.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS06530 -0.9 -2.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS12145 -0.9 -2.0 hypothetical protein compare
BWI76_RS25335 -0.8 -1.2 stringent starvation protein A compare
BWI76_RS05120 -0.8 -4.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS27435 -0.8 -2.8 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS11105 -0.8 -1.4 aminodeoxychorismate lyase compare
BWI76_RS13480 -0.8 -1.4 XRE family transcriptional regulator compare
BWI76_RS02865 -0.8 -2.6 hypothetical protein compare
BWI76_RS01890 -0.8 -2.4 transcriptional regulator Zur compare
BWI76_RS14615 -0.8 -1.1 hypothetical protein compare
BWI76_RS09640 -0.8 -2.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS06525 -0.8 -2.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS09870 -0.8 -3.2 aromatic amino acid aminotransferase compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source D-Ribose in Klebsiella michiganensis M5al

For carbon source D-Ribose across organisms