Experiment set5IT037 for Klebsiella michiganensis M5al

Compare to:

a-Cyclodextrin carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS05015 -6.4 -4.4 transcriptional regulator compare
BWI76_RS05835 -6.4 -4.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS04470 -5.8 -11.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS26085 -5.8 -4.0 3-dehydroquinate synthase compare
BWI76_RS05840 -5.6 -6.3 glutamate 5-kinase compare
BWI76_RS18950 -5.5 -4.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18920 -5.4 -4.6 ATP phosphoribosyltransferase compare
BWI76_RS18930 -5.4 -5.4 histidinol-phosphate transaminase compare
BWI76_RS00850 -5.1 -8.7 acetylglutamate kinase compare
BWI76_RS00785 -5.1 -6.9 cystathionine gamma-synthase compare
BWI76_RS23360 -5.0 -5.9 diaminopimelate decarboxylase compare
BWI76_RS09645 -4.9 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS18940 -4.9 -6.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00990 -4.7 -11.2 ketol-acid reductoisomerase compare
BWI76_RS03235 -4.7 -26.8 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS03010 -4.6 -8.4 ornithine carbamoyltransferase compare
BWI76_RS04675 -4.6 -8.4 3-isopropylmalate dehydrogenase compare
BWI76_RS04670 -4.5 -9.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS01615 -4.5 -10.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS23920 -4.4 -8.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS11840 -4.3 -6.2 tryptophan synthase subunit alpha compare
BWI76_RS18925 -4.3 -4.5 histidinol dehydrogenase compare
BWI76_RS04685 -4.3 -10.9 putative leucine operon leader peptide compare
BWI76_RS00805 -4.3 -5.0 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS08520 -4.3 -3.5 colicin transporter TolQ compare
BWI76_RS04160 -4.2 -8.2 phosphoserine phosphatase compare
BWI76_RS10990 -4.2 -4.9 dihydroorotase compare
BWI76_RS11845 -4.2 -2.6 tryptophan synthase subunit beta compare
BWI76_RS04665 -4.2 -19.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS21465 -4.2 -5.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS09760 -4.1 -5.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS27385 -4.1 -8.4 orotate phosphoribosyltransferase compare
BWI76_RS00845 -4.1 -9.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18955 -4.1 -7.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS02995 -4.0 -7.6 aspartate carbamoyltransferase compare
BWI76_RS04680 -4.0 -12.2 2-isopropylmalate synthase compare
BWI76_RS21475 -4.0 -5.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS23220 -4.0 -8.8 amino-acid N-acetyltransferase compare
BWI76_RS04645 -4.0 -7.0 3-dehydroquinase compare
BWI76_RS04245 -4.0 -16.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS02530 -4.0 -3.8 tRNA dimethylallyltransferase compare
BWI76_RS04465 -3.9 -5.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04255 -3.9 -11.6 threonine synthase compare
BWI76_RS11860 -3.9 -10.7 anthranilate synthase component I compare
BWI76_RS08385 -3.9 -5.6 citrate (Si)-synthase compare
BWI76_RS22805 -3.9 -11.7 GTP diphosphokinase compare
BWI76_RS05200 -3.8 -3.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04240 -3.8 -3.2 thr operon leader peptide compare
BWI76_RS04250 -3.8 -8.6 homoserine kinase compare
BWI76_RS00835 -3.8 -14.8 phosphoenolpyruvate carboxylase compare
BWI76_RS00400 -3.8 -2.4 glutamine synthetase compare
BWI76_RS00980 -3.8 -11.2 PLP-dependent threonine dehydratase compare
BWI76_RS26170 -3.7 -16.2 transcriptional regulator MalT compare
BWI76_RS23365 -3.7 -6.6 LysR family transcriptional regulator compare
BWI76_RS00985 -3.7 -9.1 transcriptional regulator IlvY compare
BWI76_RS07070 -3.6 -7.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20895 -3.6 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20355 -3.6 -6.3 colicin V production protein compare
BWI76_RS09670 -3.6 -5.9 recombination factor protein RarA compare
BWI76_RS26075 -3.6 -6.1 DNA adenine methylase compare
BWI76_RS11965 -3.6 -4.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS25115 -3.6 -6.2 argininosuccinate synthase compare
BWI76_RS26165 -3.6 -10.9 Glycogen phosphorylase (EC 2.4.1.1) (from data) compare
BWI76_RS24285 -3.6 -8.3 cystathionine beta-lyase compare
BWI76_RS09755 -3.5 -7.6 phosphoserine transaminase compare
BWI76_RS01185 -3.5 -2.4 adenylate cyclase compare
BWI76_RS00975 -3.5 -6.8 dihydroxy-acid dehydratase compare
BWI76_RS26160 -3.5 -14.9 4-alpha-glucanotransferase (EC 2.4.1.25) (from data) compare
BWI76_RS11850 -3.4 -10.0 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS18935 -3.4 -7.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS01655 -3.4 -9.7 homoserine O-succinyltransferase compare
BWI76_RS00855 -3.4 -8.6 argininosuccinate lyase compare
BWI76_RS01210 -3.3 -4.4 tyrosine recombinase XerC compare
BWI76_RS23240 -3.3 -4.5 exonuclease V subunit gamma compare
BWI76_RS09910 -3.3 -15.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11855 -3.3 -8.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS22755 -3.3 -9.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS21265 -3.3 -13.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS22765 -3.1 -13.8 sulfite reductase subunit alpha compare
BWI76_RS09660 -3.1 -2.9 DNA translocase FtsK compare
BWI76_RS20965 -3.1 -5.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS07065 -3.1 -7.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01610 -3.0 -8.2 phosphoribosylamine--glycine ligase compare
BWI76_RS22760 -3.0 -9.3 sulfite reductase subunit beta compare
BWI76_RS24900 -3.0 -3.2 DeoR family transcriptional regulator compare
BWI76_RS20350 -3.0 -6.1 amidophosphoribosyltransferase compare
BWI76_RS20435 -3.0 -2.2 chorismate synthase compare
BWI76_RS20650 -2.9 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS01800 -2.9 -5.4 glucose-6-phosphate isomerase compare
BWI76_RS17980 -2.9 -8.0 RNA chaperone ProQ compare
BWI76_RS26055 -2.8 -8.9 siroheme synthase compare
BWI76_RS17720 -2.7 -2.1 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS00345 -2.7 -4.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS02735 -2.7 -4.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS20510 -2.7 -6.2 glucokinase compare
BWI76_RS03240 -2.7 -8.0 maltodextrin ABC transporter permease compare
BWI76_RS03245 -2.7 -21.2 maltodextrin ABC transporter permease compare
BWI76_RS00390 -2.6 -5.7 two-component system sensor histidine kinase NtrB compare
BWI76_RS16480 -2.6 -4.2 lactoylglutathione lyase compare
BWI76_RS03250 -2.6 -20.2 maltose ABC transporter substrate-binding protein compare
BWI76_RS03270 -2.5 -18.3 sugar ABC transporter ATP-binding protein CymD compare
BWI76_RS08530 -2.5 -3.6 protein TolA compare
BWI76_RS23230 -2.5 -4.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS03260 -2.5 -14.9 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS23480 -2.4 -12.6 EAL domain-containing protein compare
BWI76_RS26570 -2.4 -3.4 anion permease compare
BWI76_RS00025 -2.4 -1.6 hypothetical protein compare
BWI76_RS06525 -2.3 -5.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS22690 -2.2 -2.9 adenylyl-sulfate kinase compare
BWI76_RS00385 -2.2 -7.9 nitrogen assimilation regulatory protein compare
BWI76_RS00965 -2.2 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS04715 -2.2 -2.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS08525 -2.1 -3.3 colicin transporter compare
BWI76_RS20970 -2.1 -2.1 phosphoribosylglycinamide formyltransferase compare
BWI76_RS25645 -2.1 -7.5 shikimate dehydrogenase compare
BWI76_RS21580 -2.1 -2.0 SsrA-binding protein compare
BWI76_RS27390 -2.0 -3.3 ribonuclease PH compare
BWI76_RS25065 -2.0 -4.5 polyribonucleotide nucleotidyltransferase compare
BWI76_RS19330 -2.0 -1.7 HAD family hydrolase compare
BWI76_RS26460 -1.9 -4.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS20640 -1.9 -6.5 cysteine synthase A compare
BWI76_RS03265 -1.9 -16.0 hypothetical protein compare
BWI76_RS26000 -1.8 -6.2 aspartate aminotransferase family protein compare
BWI76_RS26455 -1.8 -2.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS21675 -1.8 -1.6 hypothetical protein compare
BWI76_RS23265 -1.8 -4.2 hypothetical protein compare
BWI76_RS25320 -1.7 -7.1 glutamate synthase compare
BWI76_RS03255 -1.7 -11.6 hypothetical protein compare
BWI76_RS15825 -1.6 -1.4 hypothetical protein compare
BWI76_RS26620 -1.6 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS27430 -1.6 -1.6 (p)ppGpp synthetase compare
BWI76_RS06185 -1.6 -7.6 shikimate kinase II compare
BWI76_RS20380 -1.6 -1.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS12090 -1.6 -2.1 HNH endonuclease compare
BWI76_RS00960 -1.6 -6.1 acetolactate synthase 2 catalytic subunit compare
BWI76_RS06530 -1.6 -3.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS10575 -1.6 -1.8 polar amino acid ABC transporter permease compare
BWI76_RS10055 -1.6 -2.3 AraC family transcriptional regulator compare
BWI76_RS20440 -1.5 -1.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09150 -1.5 -4.1 DNA-binding transcriptional repressor DeoR compare
BWI76_RS17300 -1.5 -2.4 tRNA-Tyr compare
BWI76_RS05570 -1.5 -1.5 hypothetical protein compare
BWI76_RS09635 -1.5 -2.8 amino acid ABC transporter ATP-binding protein compare
BWI76_RS08500 -1.4 -2.9 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS08535 -1.4 -1.4 translocation protein TolB compare
BWI76_RS21370 -1.4 -2.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS26395 -1.4 -4.2 cell division protein FtsE compare
BWI76_RS11335 -1.4 -1.4 tautomerase compare
BWI76_RS17975 -1.4 -2.2 tail-specific protease compare
BWI76_RS11635 -1.4 -2.0 ABC transporter compare
BWI76_RS02985 -1.4 -5.6 reactive intermediate/imine deaminase compare
BWI76_RS25425 -1.3 -1.9 arginine repressor compare
BWI76_RS04490 -1.3 -7.0 glutathione-regulated potassium-efflux system ancillary protein KefF compare
BWI76_RS25335 -1.3 -3.1 stringent starvation protein A compare
BWI76_RS25905 -1.3 -2.7 hypothetical protein compare
BWI76_RS21235 -1.3 -1.5 hypothetical protein compare
BWI76_RS12550 -1.3 -1.9 hypothetical protein compare
BWI76_RS10530 -1.3 -1.6 GntR family transcriptional regulator with compare
BWI76_RS04530 -1.3 -2.5 peptidylprolyl isomerase SurA compare
BWI76_RS23270 -1.2 -6.9 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS24080 -1.2 -1.7 DUF179 domain-containing protein compare
BWI76_RS04705 -1.2 -4.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS27435 -1.2 -5.0 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS27440 -1.2 -3.9 DNA helicase RecG compare
BWI76_RS24075 -1.2 -2.3 glutathione synthase compare
BWI76_RS04495 -1.2 -5.2 glutathione-regulated potassium-efflux system protein KefC compare
BWI76_RS16275 -1.2 -2.3 fumarate hydratase FumA compare
BWI76_RS00875 -1.1 -3.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS21480 -1.1 -3.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS26390 -1.1 -3.8 cell division protein FtsX compare
BWI76_RS03080 -1.1 -3.1 (Fe-S)-cluster assembly protein compare
BWI76_RS13545 -1.1 -1.3 N-acetyltransferase compare
BWI76_RS06535 -1.1 -2.8 endopeptidase La compare
BWI76_RS09255 -1.1 -1.5 hypothetical protein compare
BWI76_RS03230 -1.1 -7.7 hypothetical protein compare
BWI76_RS25315 -1.0 -6.2 glutamate synthase large subunit compare
BWI76_RS17290 -1.0 -2.8 formyltetrahydrofolate deformylase compare
BWI76_RS06540 -1.0 -1.7 DNA-binding protein HU-beta compare
BWI76_RS02410 -1.0 -1.7 EF-P beta-lysylation protein EpmB compare
BWI76_RS05810 -1.0 -1.1 hypothetical protein compare
BWI76_RS10700 -1.0 -3.0 XRE family transcriptional regulator compare
BWI76_RS06605 -1.0 -2.8 ammonium transporter compare
BWI76_RS00940 -1.0 -4.0 transcriptional regulator HdfR compare
BWI76_RS24955 -1.0 -2.2 hypothetical protein compare
BWI76_RS07185 -1.0 -1.8 hypothetical protein compare
BWI76_RS04270 -1.0 -3.3 transaldolase compare
BWI76_RS25960 -1.0 -3.4 NUDIX hydrolase compare
BWI76_RS27815 -1.0 -6.5 acetolactate synthase catalytic subunit compare
BWI76_RS24025 -1.0 -4.4 agmatinase compare
BWI76_RS22120 -1.0 -4.3 glutamate--cysteine ligase compare
BWI76_RS25060 -1.0 -2.3 lipoprotein NlpI compare
BWI76_RS16075 -1.0 -1.1 oxidoreductase compare
BWI76_RS03560 -1.0 -2.5 propanediol utilization phosphotransacylase compare
BWI76_RS21000 -1.0 -3.4 exopolyphosphatase compare
BWI76_RS02575 -0.9 -3.7 exoribonuclease R compare
BWI76_RS06465 -0.9 -1.3 IclR family transcriptional regulator compare
BWI76_RS17200 -0.9 -1.2 hypothetical protein compare
BWI76_RS07725 -0.9 -1.2 iron-enterobactin transporter permease compare
BWI76_RS13965 -0.9 -2.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS21345 -0.9 -1.5 sigma-E factor regulatory protein RseB compare


Specific Phenotypes

For 51 genes in this experiment

For carbon source a-Cyclodextrin in Klebsiella michiganensis M5al

For carbon source a-Cyclodextrin across organisms