Experiment set5IT036 for Klebsiella michiganensis M5al

Compare to:

L-Rhamnose monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS00805 -7.7 -5.3 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS18925 -7.5 -5.2 histidinol dehydrogenase compare
BWI76_RS18930 -7.1 -4.0 histidinol-phosphate transaminase compare
BWI76_RS00990 -6.9 -6.7 ketol-acid reductoisomerase compare
BWI76_RS04675 -6.7 -6.6 3-isopropylmalate dehydrogenase compare
BWI76_RS00855 -6.7 -6.6 argininosuccinate lyase compare
BWI76_RS18920 -6.7 -4.6 ATP phosphoribosyltransferase compare
BWI76_RS18950 -6.5 -6.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS05835 -6.4 -4.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS05840 -6.3 -6.1 glutamate 5-kinase compare
BWI76_RS04470 -6.1 -11.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS04255 -6.1 -9.3 threonine synthase compare
BWI76_RS04250 -6.0 -9.2 homoserine kinase compare
BWI76_RS19070 -6.0 -13.9 rhamnosyltransferase compare
BWI76_RS23920 -5.9 -5.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04465 -5.9 -5.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18940 -5.8 -6.3 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS07070 -5.8 -5.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21465 -5.7 -6.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04670 -5.7 -8.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS21475 -5.6 -8.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS26085 -5.6 -3.8 3-dehydroquinate synthase compare
BWI76_RS00850 -5.6 -8.2 acetylglutamate kinase compare
BWI76_RS04245 -5.5 -15.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS09760 -5.5 -6.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00670 -5.4 -10.8 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) (from data) conserved
BWI76_RS00835 -5.3 -13.8 phosphoenolpyruvate carboxylase compare
BWI76_RS04160 -5.2 -9.4 phosphoserine phosphatase compare
BWI76_RS18955 -5.2 -6.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS02995 -5.2 -8.9 aspartate carbamoyltransferase compare
BWI76_RS09755 -5.2 -8.7 phosphoserine transaminase compare
BWI76_RS04645 -5.2 -7.9 3-dehydroquinase compare
BWI76_RS27385 -5.2 -6.2 orotate phosphoribosyltransferase compare
BWI76_RS01655 -5.2 -9.6 homoserine O-succinyltransferase compare
BWI76_RS01615 -5.2 -12.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS20350 -5.2 -6.9 amidophosphoribosyltransferase compare
BWI76_RS11860 -5.1 -9.9 anthranilate synthase component I compare
BWI76_RS00785 -5.1 -6.9 cystathionine gamma-synthase compare
BWI76_RS09645 -5.0 -2.1 thioredoxin-disulfide reductase compare
BWI76_RS11850 -5.0 -10.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00980 -5.0 -11.1 PLP-dependent threonine dehydratase compare
BWI76_RS04680 -5.0 -14.7 2-isopropylmalate synthase compare
BWI76_RS03010 -5.0 -7.9 ornithine carbamoyltransferase compare
BWI76_RS23220 -4.9 -9.4 amino-acid N-acetyltransferase compare
BWI76_RS00985 -4.8 -8.1 transcriptional regulator IlvY compare
BWI76_RS25115 -4.8 -8.7 argininosuccinate synthase compare
BWI76_RS19055 -4.8 -9.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS04665 -4.8 -18.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS24285 -4.8 -7.5 cystathionine beta-lyase compare
BWI76_RS22690 -4.8 -4.0 adenylyl-sulfate kinase compare
BWI76_RS19010 -4.7 -3.3 polysaccharide pyruvyl transferase yvff compare
BWI76_RS22755 -4.7 -6.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04685 -4.6 -11.6 putative leucine operon leader peptide compare
BWI76_RS18935 -4.6 -6.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00845 -4.6 -7.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS20355 -4.6 -3.9 colicin V production protein compare
BWI76_RS05015 -4.5 -3.4 transcriptional regulator compare
BWI76_RS09910 -4.5 -17.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS19035 -4.5 -8.1 dTDP-rhamnosyl transferase compare
BWI76_RS11965 -4.5 -4.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS19050 -4.4 -12.5 NAD(P)-dependent oxidoreductase compare
BWI76_RS11840 -4.4 -5.9 tryptophan synthase subunit alpha compare
BWI76_RS19060 -4.4 -18.9 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS19045 -4.4 -10.2 capsular polysaccharide biosynthesis protein compare
BWI76_RS01210 -4.3 -3.3 tyrosine recombinase XerC compare
BWI76_RS11855 -4.2 -6.8 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00975 -4.1 -6.5 dihydroxy-acid dehydratase compare
BWI76_RS23240 -4.1 -2.8 exonuclease V subunit gamma compare
BWI76_RS20895 -4.0 -6.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS21265 -4.0 -12.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS02815 -4.0 -3.5 fructose-bisphosphatase class I compare
BWI76_RS20965 -4.0 -4.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS22760 -3.9 -7.8 sulfite reductase subunit beta compare
BWI76_RS23360 -3.9 -5.2 diaminopimelate decarboxylase compare
BWI76_RS15825 -3.9 -3.7 hypothetical protein compare
BWI76_RS11845 -3.9 -3.2 tryptophan synthase subunit beta compare
BWI76_RS20435 -3.8 -2.3 chorismate synthase compare
BWI76_RS23365 -3.8 -8.8 LysR family transcriptional regulator compare
BWI76_RS22765 -3.8 -10.7 sulfite reductase subunit alpha compare
BWI76_RS27440 -3.8 -4.7 DNA helicase RecG compare
BWI76_RS04240 -3.7 -3.3 thr operon leader peptide compare
BWI76_RS01610 -3.7 -5.8 phosphoribosylamine--glycine ligase compare
BWI76_RS00400 -3.6 -2.4 glutamine synthetase compare
BWI76_RS07065 -3.5 -8.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS05200 -3.4 -4.0 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS00965 -3.4 -2.0 acetolactate synthase 2 small subunit compare
BWI76_RS01200 -3.4 -3.3 diaminopimelate epimerase compare
BWI76_RS10990 -3.4 -4.9 dihydroorotase compare
BWI76_RS01185 -3.3 -2.3 adenylate cyclase compare
BWI76_RS19040 -3.2 -6.5 hypothetical protein compare
BWI76_RS23230 -3.2 -3.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS08385 -3.1 -4.0 citrate (Si)-synthase compare
BWI76_RS00675 -3.1 -11.1 L-rhamnose isomerase (EC 5.3.1.14) (from data) conserved
BWI76_RS00680 -3.0 -7.0 Rhamnulokinase (EC 2.7.1.5) (from data) conserved
BWI76_RS20650 -3.0 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS27390 -2.9 -4.1 ribonuclease PH compare
BWI76_RS01800 -2.8 -4.4 glucose-6-phosphate isomerase compare
BWI76_RS17720 -2.8 -2.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS23330 -2.7 -9.3 transcriptional regulator GalR compare
BWI76_RS09660 -2.7 -3.1 DNA translocase FtsK compare
BWI76_RS26455 -2.7 -4.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27430 -2.7 -2.2 (p)ppGpp synthetase compare
BWI76_RS26460 -2.5 -4.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26470 -2.5 -4.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS20440 -2.4 -2.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS04530 -2.4 -3.8 peptidylprolyl isomerase SurA compare
BWI76_RS25320 -2.3 -9.5 glutamate synthase compare
BWI76_RS02735 -2.3 -3.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS26000 -2.2 -7.2 aspartate aminotransferase family protein compare
BWI76_RS08520 -2.2 -3.0 colicin transporter TolQ compare
BWI76_RS04270 -2.1 -6.4 transaldolase compare
BWI76_RS26065 -2.1 -4.1 phosphoglycolate phosphatase compare
BWI76_RS00690 -2.1 -6.4 transcriptional activator RhaS conserved
BWI76_RS23480 -2.0 -11.1 EAL domain-containing protein compare
BWI76_RS00695 -1.9 -7.7 AraC family transcriptional regulator conserved
BWI76_RS19065 -1.9 -15.0 dTDP-glucose 4,6-dehydratase compare
BWI76_RS25315 -1.9 -9.6 glutamate synthase large subunit compare
BWI76_RS00345 -1.9 -3.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS26570 -1.9 -3.3 anion permease compare
BWI76_RS06185 -1.9 -9.8 shikimate kinase II compare
BWI76_RS19840 -1.8 -1.8 hypothetical protein compare
BWI76_RS16275 -1.8 -2.5 fumarate hydratase FumA compare
BWI76_RS00390 -1.8 -5.0 two-component system sensor histidine kinase NtrB compare
BWI76_RS25645 -1.7 -7.8 shikimate dehydrogenase compare
BWI76_RS16965 -1.7 -2.6 murein lipoprotein compare
BWI76_RS26055 -1.6 -6.3 siroheme synthase compare
BWI76_RS08525 -1.6 -4.3 colicin transporter compare
BWI76_RS17290 -1.6 -4.8 formyltetrahydrofolate deformylase compare
BWI76_RS27835 -1.6 -2.3 acyltransferase compare
BWI76_RS05260 -1.6 -2.0 chaperone compare
BWI76_RS17980 -1.6 -5.0 RNA chaperone ProQ compare
BWI76_RS19090 -1.6 -9.7 polysaccharide export protein Wza compare
BWI76_RS02530 -1.6 -1.7 tRNA dimethylallyltransferase compare
BWI76_RS17975 -1.5 -4.9 tail-specific protease compare
BWI76_RS08530 -1.5 -3.1 protein TolA compare
BWI76_RS22805 -1.5 -6.0 GTP diphosphokinase compare
BWI76_RS15810 -1.5 -6.1 hypothetical protein compare
BWI76_RS09970 -1.5 -2.4 porin OmpA compare
BWI76_RS20640 -1.5 -3.8 cysteine synthase A compare
BWI76_RS19085 -1.5 -9.0 protein-tyrosine-phosphatase compare
BWI76_RS23265 -1.4 -3.8 hypothetical protein compare
BWI76_RS08535 -1.4 -2.1 translocation protein TolB compare
BWI76_RS15650 -1.3 -3.4 gp5 compare
BWI76_RS16895 -1.3 -1.8 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS15835 -1.3 -0.9 hypothetical protein compare
BWI76_RS21580 -1.3 -1.7 SsrA-binding protein compare
BWI76_RS00960 -1.3 -5.1 acetolactate synthase 2 catalytic subunit compare
BWI76_RS02985 -1.3 -5.0 reactive intermediate/imine deaminase compare
BWI76_RS08395 -1.2 -2.1 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS09670 -1.2 -3.2 recombination factor protein RarA compare
BWI76_RS09655 -1.2 -3.2 leucine-responsive regulatory protein compare
BWI76_RS19330 -1.1 -1.3 HAD family hydrolase compare
BWI76_RS27605 -1.1 -2.3 hypothetical protein compare
BWI76_RS26620 -1.1 -1.3 Fe-S biogenesis protein NfuA compare
BWI76_RS19690 -1.1 -2.5 LysR family transcriptional regulator compare
BWI76_RS25070 -1.1 -1.4 hypothetical protein compare
BWI76_RS00385 -1.1 -5.0 nitrogen assimilation regulatory protein compare
BWI76_RS21480 -1.1 -3.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS06800 -1.1 -1.2 DUF2496 domain-containing protein compare
BWI76_RS15830 -1.1 -2.0 hypothetical protein compare
BWI76_RS04705 -1.1 -2.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS03880 -1.1 -2.2 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS04515 -1.1 -1.6 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS08405 -1.1 -1.7 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS20970 -1.0 -1.5 phosphoribosylglycinamide formyltransferase compare
BWI76_RS01350 -1.0 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS15685 -1.0 -2.2 hypothetical protein compare
BWI76_RS26390 -1.0 -2.9 cell division protein FtsX compare
BWI76_RS21310 -1.0 -1.1 DNA repair protein RecO compare
BWI76_RS20005 -1.0 -4.0 membrane protein compare
BWI76_RS06485 -1.0 -2.1 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS12855 -1.0 -1.2 enamine deaminase RidA compare
BWI76_RS02410 -1.0 -1.5 EF-P beta-lysylation protein EpmB compare
BWI76_RS03040 -1.0 -2.5 leucyl aminopeptidase compare
BWI76_RS26685 -1.0 -3.4 glutathione-disulfide reductase compare
BWI76_RS00970 -1.0 -2.2 branched chain amino acid aminotransferase compare
BWI76_RS15605 -0.9 -1.8 hypothetical protein compare
BWI76_RS26395 -0.9 -3.4 cell division protein FtsE compare
BWI76_RS16200 -0.9 -2.4 NAD(P) transhydrogenase subunit beta compare
BWI76_RS07740 -0.9 -1.4 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS00025 -0.9 -0.9 hypothetical protein compare
BWI76_RS22420 -0.9 -2.3 LacI family transcriptional regulator compare
BWI76_RS22695 -0.9 -2.7 sulfate adenylyltransferase compare
BWI76_RS08310 -0.9 -2.0 potassium-transporting ATPase subunit C compare
BWI76_RS15955 -0.9 -6.3 transcriptional regulator compare
BWI76_RS00180 -0.9 -1.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS12305 -0.9 -3.7 hypothetical protein compare
BWI76_RS25335 -0.9 -3.1 stringent starvation protein A compare
BWI76_RS18165 -0.9 -1.0 NUDIX pyrophosphatase compare
BWI76_RS11105 -0.9 -1.0 aminodeoxychorismate lyase compare
BWI76_RS09640 -0.9 -2.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS21360 -0.9 -3.6 L-aspartate oxidase compare
BWI76_RS27435 -0.9 -3.8 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS16955 -0.9 -1.3 hypothetical protein compare
BWI76_RS15760 -0.9 -1.5 hypothetical protein compare
BWI76_RS20880 -0.9 -2.0 esterase compare
BWI76_RS20995 -0.9 -3.7 RNA degradosome polyphosphate kinase compare
BWI76_RS21340 -0.9 -1.5 SoxR reducing system protein RseC compare
BWI76_RS02785 -0.9 -2.5 AIG2 family protein compare
BWI76_RS00355 -0.9 -2.6 DNA polymerase I compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source L-Rhamnose monohydrate in Klebsiella michiganensis M5al

For carbon source L-Rhamnose monohydrate across organisms