Experiment set5IT035 for Klebsiella michiganensis M5al

Compare to:

D-Raffinose pentahydrate carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS21475 -8.1 -5.6 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04470 -6.8 -8.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS25115 -6.7 -6.5 argininosuccinate synthase compare
BWI76_RS05835 -6.2 -4.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS18940 -6.1 -7.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04160 -6.0 -8.1 phosphoserine phosphatase compare
BWI76_RS08385 -5.9 -3.0 citrate (Si)-synthase compare
BWI76_RS23920 -5.8 -5.7 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS20355 -5.6 -4.0 colicin V production protein compare
BWI76_RS26085 -5.5 -3.4 3-dehydroquinate synthase compare
BWI76_RS04465 -5.4 -5.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00785 -5.2 -6.2 cystathionine gamma-synthase compare
BWI76_RS00850 -5.2 -10.4 acetylglutamate kinase compare
BWI76_RS05840 -5.2 -6.4 glutamate 5-kinase compare
BWI76_RS11850 -5.1 -11.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS18950 -5.1 -6.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00980 -5.1 -11.3 PLP-dependent threonine dehydratase compare
BWI76_RS01615 -5.0 -12.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00855 -5.0 -9.6 argininosuccinate lyase compare
BWI76_RS00990 -5.0 -9.2 ketol-acid reductoisomerase compare
BWI76_RS00835 -4.9 -13.2 phosphoenolpyruvate carboxylase compare
BWI76_RS04680 -4.9 -14.2 2-isopropylmalate synthase compare
BWI76_RS00965 -4.8 -1.7 acetolactate synthase 2 small subunit compare
BWI76_RS18925 -4.8 -7.9 histidinol dehydrogenase compare
BWI76_RS21265 -4.8 -12.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS07065 -4.8 -7.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04250 -4.7 -7.0 homoserine kinase compare
BWI76_RS04670 -4.7 -8.7 3-isopropylmalate dehydratase large subunit compare
BWI76_RS09755 -4.7 -10.9 phosphoserine transaminase compare
BWI76_RS20350 -4.7 -9.5 amidophosphoribosyltransferase compare
BWI76_RS04675 -4.7 -6.2 3-isopropylmalate dehydrogenase compare
BWI76_RS23360 -4.7 -3.1 diaminopimelate decarboxylase compare
BWI76_RS19010 -4.6 -3.2 polysaccharide pyruvyl transferase yvff compare
BWI76_RS00985 -4.6 -7.7 transcriptional regulator IlvY compare
BWI76_RS00845 -4.6 -11.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04665 -4.6 -20.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS18955 -4.6 -5.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS26460 -4.6 -5.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS22755 -4.6 -9.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS22765 -4.6 -12.6 sulfite reductase subunit alpha compare
BWI76_RS00805 -4.6 -4.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS11855 -4.5 -7.6 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04245 -4.4 -13.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18920 -4.4 -3.6 ATP phosphoribosyltransferase compare
BWI76_RS18935 -4.4 -7.6 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04255 -4.3 -9.0 threonine synthase compare
BWI76_RS18930 -4.3 -4.3 histidinol-phosphate transaminase compare
BWI76_RS04240 -4.3 -1.8 thr operon leader peptide compare
BWI76_RS24285 -4.3 -8.2 cystathionine beta-lyase compare
BWI76_RS20965 -4.3 -5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS05015 -4.2 -4.4 transcriptional regulator compare
BWI76_RS04685 -4.2 -12.0 putative leucine operon leader peptide compare
BWI76_RS19035 -4.1 -7.9 dTDP-rhamnosyl transferase compare
BWI76_RS22805 -4.1 -13.0 GTP diphosphokinase compare
BWI76_RS02965 -4.0 -9.1 PTS trehalose transporter subunit IIBC compare
BWI76_RS04645 -4.0 -7.5 3-dehydroquinase compare
BWI76_RS00975 -4.0 -8.9 dihydroxy-acid dehydratase compare
BWI76_RS11840 -3.9 -5.7 tryptophan synthase subunit alpha compare
BWI76_RS23220 -3.9 -7.8 amino-acid N-acetyltransferase compare
BWI76_RS11860 -3.8 -8.1 anthranilate synthase component I compare
BWI76_RS09760 -3.8 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS22690 -3.8 -3.5 adenylyl-sulfate kinase compare
BWI76_RS20435 -3.8 -1.9 chorismate synthase compare
BWI76_RS01610 -3.7 -7.9 phosphoribosylamine--glycine ligase compare
BWI76_RS25645 -3.7 -6.7 shikimate dehydrogenase compare
BWI76_RS20895 -3.7 -3.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS07070 -3.7 -6.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS23365 -3.6 -5.8 LysR family transcriptional regulator compare
BWI76_RS03010 -3.6 -8.6 ornithine carbamoyltransferase compare
BWI76_RS01655 -3.5 -9.7 homoserine O-succinyltransferase compare
BWI76_RS19070 -3.5 -13.9 rhamnosyltransferase compare
BWI76_RS22760 -3.4 -7.9 sulfite reductase subunit beta compare
BWI76_RS19050 -3.4 -9.7 NAD(P)-dependent oxidoreductase compare
BWI76_RS01210 -3.4 -2.5 tyrosine recombinase XerC compare
BWI76_RS19040 -3.4 -7.8 hypothetical protein compare
BWI76_RS19045 -3.4 -10.7 capsular polysaccharide biosynthesis protein compare
BWI76_RS23240 -3.3 -3.9 exonuclease V subunit gamma compare
BWI76_RS11845 -3.3 -3.3 tryptophan synthase subunit beta compare
BWI76_RS17720 -3.2 -2.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS19065 -3.2 -21.0 dTDP-glucose 4,6-dehydratase compare
BWI76_RS19060 -3.2 -19.3 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS19055 -3.1 -7.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS25320 -3.0 -7.3 glutamate synthase compare
BWI76_RS19085 -3.0 -15.5 protein-tyrosine-phosphatase compare
BWI76_RS25600 -3.0 -1.5 tRNA-Thr compare
BWI76_RS26000 -2.9 -9.4 aspartate aminotransferase family protein compare
BWI76_RS21465 -2.8 -3.7 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00400 -2.8 -2.4 glutamine synthetase compare
BWI76_RS01800 -2.7 -4.6 glucose-6-phosphate isomerase compare
BWI76_RS20650 -2.6 -2.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS25335 -2.6 -4.1 stringent starvation protein A compare
BWI76_RS02735 -2.5 -6.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00600 -2.5 -7.9 LacI family transcriptional regulator compare
BWI76_RS08405 -2.5 -4.6 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS09645 -2.4 -1.7 thioredoxin-disulfide reductase compare
BWI76_RS19090 -2.4 -11.0 polysaccharide export protein Wza compare
BWI76_RS20440 -2.4 -2.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS23265 -2.4 -3.9 hypothetical protein compare
BWI76_RS25315 -2.4 -12.3 glutamate synthase large subunit compare
BWI76_RS09660 -2.3 -2.6 DNA translocase FtsK compare
BWI76_RS27305 -2.2 -8.6 glycosyl transferase compare
BWI76_RS26455 -2.2 -3.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04270 -2.2 -4.8 transaldolase compare
BWI76_RS20995 -2.2 -4.9 RNA degradosome polyphosphate kinase compare
BWI76_RS27275 -2.1 -8.2 hypothetical protein compare
BWI76_RS19080 -2.1 -16.0 tyrosine autokinase compare
BWI76_RS27280 -2.0 -8.7 polymerase compare
BWI76_RS00960 -2.0 -5.6 acetolactate synthase 2 catalytic subunit compare
BWI76_RS21310 -1.9 -1.3 DNA repair protein RecO compare
BWI76_RS00390 -1.9 -5.6 two-component system sensor histidine kinase NtrB compare
BWI76_RS00180 -1.8 -1.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS27290 -1.8 -7.2 hypothetical protein compare
BWI76_RS11965 -1.8 -3.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS05200 -1.7 -3.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS23230 -1.7 -3.5 exodeoxyribonuclease V subunit beta compare
BWI76_RS22085 -1.7 -2.9 L-valine transporter subunit YgaH compare
BWI76_RS20640 -1.7 -5.5 cysteine synthase A compare
BWI76_RS26055 -1.7 -6.7 siroheme synthase compare
BWI76_RS19025 -1.6 -9.4 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS18990 -1.5 -9.9 ABC transporter permease compare
BWI76_RS03105 -1.4 -1.1 myo-inosose-2 dehydratase compare
BWI76_RS21070 -1.4 -2.1 outer membrane protein assembly factor BamB compare
BWI76_RS18985 -1.4 -8.8 LPS O-antigen ABC transporter ATP-binding protein compare
BWI76_RS04515 -1.4 -1.6 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS12090 -1.4 -2.1 HNH endonuclease compare
BWI76_RS21690 -1.4 -2.2 hypothetical protein compare
BWI76_RS00345 -1.4 -2.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS17290 -1.4 -3.5 formyltetrahydrofolate deformylase compare
BWI76_RS26470 -1.4 -3.6 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS06400 -1.4 -2.6 oxidative-stress-resistance chaperone compare
BWI76_RS13775 -1.3 -2.6 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS02530 -1.3 -2.0 tRNA dimethylallyltransferase compare
BWI76_RS00385 -1.3 -5.4 nitrogen assimilation regulatory protein compare
BWI76_RS26075 -1.3 -3.7 DNA adenine methylase compare
BWI76_RS07465 -1.2 -2.4 TetR family transcriptional regulator compare
BWI76_RS18855 -1.2 -2.6 cysteine desulfurase NifS compare
BWI76_RS20510 -1.2 -4.5 glucokinase compare
BWI76_RS15840 -1.2 -3.1 prophage protein compare
BWI76_RS02610 -1.2 -4.1 transcriptional regulator compare
BWI76_RS04715 -1.2 -1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS00140 -1.2 -1.0 phosphate transport system regulator PhoU compare
BWI76_RS12550 -1.2 -2.0 hypothetical protein compare
BWI76_RS15830 -1.1 -2.4 hypothetical protein compare
BWI76_RS20375 -1.1 -1.9 membrane protein compare
BWI76_RS20490 -1.1 -2.9 hypothetical protein compare
BWI76_RS06015 -1.1 -1.4 hypothetical protein compare
BWI76_RS16815 -1.1 -1.8 periplasmic binding protein compare
BWI76_RS17190 -1.1 -1.8 TonB system transport protein TonB compare
BWI76_RS00710 -1.1 -1.9 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS26570 -1.1 -1.5 anion permease compare
BWI76_RS04845 -1.1 -6.0 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS08700 -1.1 -5.2 helix-turn-helix-type transcriptional regulator compare
BWI76_RS12270 -1.1 -2.8 hypothetical protein compare
BWI76_RS20970 -1.1 -1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS15740 -1.1 -2.7 HNH endonuclease compare
BWI76_RS17100 -1.1 -2.9 glutathione peroxidase compare
BWI76_RS26775 -1.1 -4.7 endo-1,4-D-glucanase compare
BWI76_RS15825 -1.1 -2.1 hypothetical protein compare
BWI76_RS11810 -1.0 -1.7 outer membrane protein OmpW compare
BWI76_RS23330 -1.0 -4.2 transcriptional regulator GalR compare
BWI76_RS17155 -1.0 -1.7 hypothetical protein compare
BWI76_RS08580 -1.0 -3.0 quinolinate synthetase compare
BWI76_RS23420 -1.0 -5.9 LacI family transcriptional regulator compare
BWI76_RS16895 -1.0 -1.1 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS07475 -1.0 -0.8 DNA-binding transcriptional regulator RamA compare
BWI76_RS13275 -1.0 -1.5 hypothetical protein compare
BWI76_RS10035 -1.0 -1.5 hypothetical protein compare
BWI76_RS22935 -1.0 -1.1 L-fucose mutarotase compare
BWI76_RS23885 -1.0 -1.4 2-octaprenylphenol hydroxylase compare
BWI76_RS13560 -1.0 -0.8 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS02580 -1.0 -1.0 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS21660 -1.0 -1.2 antirestriction protein compare
BWI76_RS06485 -1.0 -1.9 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS02745 -1.0 -1.1 hypothetical protein compare
BWI76_RS05120 -1.0 -4.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS11990 -1.0 -4.4 exoribonuclease II compare
BWI76_RS01350 -1.0 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS13820 -1.0 -1.6 hypothetical protein compare
BWI76_RS16775 -1.0 -3.6 malate/lactate/ureidoglycolate dehydrogenase compare
BWI76_RS21460 -1.0 -1.2 translation inhibitor protein RaiA compare
BWI76_RS14000 -1.0 -3.8 glutamine amidotransferase compare
BWI76_RS15835 -1.0 -0.6 hypothetical protein compare
BWI76_RS24900 -1.0 -1.2 DeoR family transcriptional regulator compare
BWI76_RS06735 -1.0 -1.5 50S ribosomal protein L31 compare
BWI76_RS09050 -1.0 -2.5 MFS transporter compare
BWI76_RS05970 -0.9 -1.6 hypothetical protein compare
BWI76_RS14325 -0.9 -3.1 maturase compare
BWI76_RS01200 -0.9 -1.7 diaminopimelate epimerase compare
BWI76_RS07725 -0.9 -1.0 iron-enterobactin transporter permease compare
BWI76_RS21580 -0.9 -0.8 SsrA-binding protein compare
BWI76_RS01565 -0.9 -1.4 NADH pyrophosphatase compare
BWI76_RS09110 -0.9 -2.4 glutathione ABC transporter permease GsiD compare
BWI76_RS09150 -0.9 -1.6 DNA-binding transcriptional repressor DeoR compare
BWI76_RS22125 -0.9 -1.8 membrane protein compare
BWI76_RS10990 -0.9 -1.1 dihydroorotase compare
BWI76_RS23480 -0.9 -5.9 EAL domain-containing protein compare
BWI76_RS15590 -0.9 -3.4 hypothetical protein compare
BWI76_RS15705 -0.9 -2.4 putative holin protein compare
BWI76_RS21370 -0.9 -1.4 ATP-dependent RNA helicase SrmB compare
BWI76_RS01275 -0.9 -2.9 LysR family transcriptional regulator compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source D-Raffinose pentahydrate in Klebsiella michiganensis M5al

For carbon source D-Raffinose pentahydrate across organisms