Experiment set5IT034 for Klebsiella michiganensis M5al

Compare to:

D-Xylose carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS20965 -6.4 -4.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04670 -6.3 -8.7 3-isopropylmalate dehydratase large subunit compare
BWI76_RS05835 -6.2 -4.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS21475 -6.0 -8.2 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS05840 -5.9 -5.7 glutamate 5-kinase compare
BWI76_RS04255 -5.7 -9.5 threonine synthase compare
BWI76_RS00850 -5.7 -11.2 acetylglutamate kinase compare
BWI76_RS04250 -5.6 -7.3 homoserine kinase compare
BWI76_RS01655 -5.6 -8.3 homoserine O-succinyltransferase compare
BWI76_RS07070 -5.6 -5.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04470 -5.5 -11.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS24285 -5.5 -8.3 cystathionine beta-lyase compare
BWI76_RS18940 -5.4 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS18920 -5.4 -5.3 ATP phosphoribosyltransferase compare
BWI76_RS00855 -5.4 -7.4 argininosuccinate lyase compare
BWI76_RS04465 -5.4 -6.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18930 -5.4 -4.9 histidinol-phosphate transaminase compare
BWI76_RS18925 -5.4 -6.4 histidinol dehydrogenase compare
BWI76_RS01615 -5.3 -11.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00835 -5.3 -15.1 phosphoenolpyruvate carboxylase compare
BWI76_RS00990 -5.2 -9.2 ketol-acid reductoisomerase compare
BWI76_RS15825 -5.2 -3.1 hypothetical protein compare
BWI76_RS18950 -5.2 -5.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04665 -5.1 -19.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04245 -5.0 -13.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS03010 -5.0 -10.7 ornithine carbamoyltransferase compare
BWI76_RS04160 -5.0 -9.5 phosphoserine phosphatase compare
BWI76_RS08385 -4.9 -4.8 citrate (Si)-synthase compare
BWI76_RS04675 -4.9 -8.1 3-isopropylmalate dehydrogenase compare
BWI76_RS00965 -4.8 -2.1 acetolactate synthase 2 small subunit compare
BWI76_RS11840 -4.8 -4.1 tryptophan synthase subunit alpha compare
BWI76_RS18935 -4.8 -6.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS09755 -4.8 -8.9 phosphoserine transaminase compare
BWI76_RS11965 -4.7 -5.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS23220 -4.7 -9.6 amino-acid N-acetyltransferase compare
BWI76_RS21465 -4.7 -6.6 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11850 -4.7 -11.7 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS04680 -4.7 -11.0 2-isopropylmalate synthase compare
BWI76_RS00805 -4.6 -5.1 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS20895 -4.6 -6.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00845 -4.6 -11.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS10990 -4.5 -4.4 dihydroorotase compare
BWI76_RS25115 -4.5 -8.6 argininosuccinate synthase compare
BWI76_RS00785 -4.4 -7.4 cystathionine gamma-synthase compare
BWI76_RS11845 -4.4 -2.0 tryptophan synthase subunit beta compare
BWI76_RS23360 -4.4 -3.5 diaminopimelate decarboxylase compare
BWI76_RS27385 -4.4 -7.9 orotate phosphoribosyltransferase compare
BWI76_RS04685 -4.3 -11.4 putative leucine operon leader peptide compare
BWI76_RS22755 -4.3 -8.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23920 -4.3 -4.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04645 -4.2 -4.7 3-dehydroquinase compare
BWI76_RS00980 -4.2 -9.3 PLP-dependent threonine dehydratase compare
BWI76_RS00975 -4.1 -7.0 dihydroxy-acid dehydratase compare
BWI76_RS22760 -4.1 -9.4 sulfite reductase subunit beta compare
BWI76_RS20355 -4.1 -3.8 colicin V production protein compare
BWI76_RS20350 -4.0 -9.7 amidophosphoribosyltransferase compare
BWI76_RS07065 -4.0 -8.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18955 -4.0 -3.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS21265 -4.0 -13.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11855 -4.0 -6.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS22765 -3.9 -15.7 sulfite reductase subunit alpha compare
BWI76_RS04240 -3.9 -2.7 thr operon leader peptide compare
BWI76_RS09660 -3.7 -2.5 DNA translocase FtsK compare
BWI76_RS09910 -3.7 -15.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS20435 -3.7 -2.3 chorismate synthase compare
BWI76_RS27025 -3.7 -11.3 Xylose isomerase (EC 5.3.1.5) (from data) conserved
BWI76_RS26075 -3.7 -5.3 DNA adenine methylase compare
BWI76_RS23365 -3.7 -5.8 LysR family transcriptional regulator compare
BWI76_RS02995 -3.6 -7.2 aspartate carbamoyltransferase compare
BWI76_RS00400 -3.5 -2.4 glutamine synthetase compare
BWI76_RS23240 -3.5 -3.4 exonuclease V subunit gamma compare
BWI76_RS00985 -3.5 -7.2 transcriptional regulator IlvY compare
BWI76_RS25960 -3.4 -6.1 NUDIX hydrolase compare
BWI76_RS11860 -3.4 -8.2 anthranilate synthase component I compare
BWI76_RS05015 -3.3 -4.2 transcriptional regulator compare
BWI76_RS02735 -3.3 -6.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS09760 -3.1 -2.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01610 -3.1 -5.6 phosphoribosylamine--glycine ligase compare
BWI76_RS22805 -3.0 -9.3 GTP diphosphokinase compare
BWI76_RS27390 -2.8 -4.2 ribonuclease PH compare
BWI76_RS20650 -2.8 -1.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS01185 -2.8 -2.6 adenylate cyclase compare
BWI76_RS22690 -2.7 -5.1 adenylyl-sulfate kinase compare
BWI76_RS27045 -2.7 -5.8 XylR family transcriptional regulator conserved
BWI76_RS09645 -2.7 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS26460 -2.6 -5.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS25645 -2.5 -8.8 shikimate dehydrogenase compare
BWI76_RS20380 -2.4 -1.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS27020 -2.4 -9.3 Xylulose kinase (EC 2.7.1.17) (from data) conserved
BWI76_RS01210 -2.4 -4.5 tyrosine recombinase XerC compare
BWI76_RS23230 -2.4 -3.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS26570 -2.2 -4.1 anion permease compare
BWI76_RS00390 -2.2 -4.9 two-component system sensor histidine kinase NtrB compare
BWI76_RS03235 -2.2 -15.1 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS26055 -2.1 -7.4 siroheme synthase compare
BWI76_RS23480 -2.1 -10.4 EAL domain-containing protein compare
BWI76_RS09670 -2.0 -5.3 recombination factor protein RarA compare
BWI76_RS07780 -2.0 -2.0 hypothetical protein compare
BWI76_RS26455 -1.9 -2.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04270 -1.9 -5.6 transaldolase compare
BWI76_RS25000 -1.9 -1.8 malonate decarboxylase acyl carrier protein compare
BWI76_RS17720 -1.9 -1.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS26000 -1.9 -6.9 aspartate aminotransferase family protein compare
BWI76_RS01885 -1.8 -1.9 CsbD family protein compare
BWI76_RS05200 -1.8 -3.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS22420 -1.8 -2.9 LacI family transcriptional regulator compare
BWI76_RS00180 -1.8 -2.1 F0F1 ATP synthase subunit epsilon compare
BWI76_RS27440 -1.7 -3.4 DNA helicase RecG compare
BWI76_RS06185 -1.7 -6.6 shikimate kinase II compare
BWI76_RS24900 -1.7 -2.1 DeoR family transcriptional regulator compare
BWI76_RS26085 -1.6 -1.8 3-dehydroquinate synthase compare
BWI76_RS19010 -1.6 -3.6 polysaccharide pyruvyl transferase yvff compare
BWI76_RS27430 -1.6 -1.6 (p)ppGpp synthetase compare
BWI76_RS20640 -1.6 -5.2 cysteine synthase A compare
BWI76_RS21675 -1.5 -1.4 hypothetical protein compare
BWI76_RS00025 -1.5 -1.3 hypothetical protein compare
BWI76_RS20440 -1.5 -1.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS04530 -1.5 -2.1 peptidylprolyl isomerase SurA compare
BWI76_RS24945 -1.4 -1.3 glutamine amidotransferase compare
BWI76_RS16315 -1.4 -1.3 SirA-like protein compare
BWI76_RS00345 -1.4 -2.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS16480 -1.4 -2.0 lactoylglutathione lyase compare
BWI76_RS19840 -1.3 -1.5 hypothetical protein compare
BWI76_RS00960 -1.3 -5.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS18165 -1.3 -1.4 NUDIX pyrophosphatase compare
BWI76_RS05680 -1.3 -2.9 LacI family transcriptional regulator compare
BWI76_RS06525 -1.3 -3.2 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS27075 -1.3 -4.7 IclR family transcriptional regulator compare
BWI76_RS15760 -1.3 -1.9 hypothetical protein compare
BWI76_RS08720 -1.2 -2.0 imidazolonepropionase compare
BWI76_RS00385 -1.2 -4.6 nitrogen assimilation regulatory protein compare
BWI76_RS09635 -1.2 -2.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS02725 -1.2 -1.1 HxlR family transcriptional regulator compare
BWI76_RS08405 -1.2 -1.9 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS04705 -1.2 -4.7 DNA-binding transcriptional regulator FruR compare
BWI76_RS02580 -1.2 -0.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS21070 -1.2 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS19935 -1.1 -1.4 hypothetical protein compare
BWI76_RS06530 -1.1 -3.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS26410 -1.1 -2.1 membrane protein compare
BWI76_RS25425 -1.1 -1.7 arginine repressor compare
BWI76_RS02530 -1.1 -1.6 tRNA dimethylallyltransferase compare
BWI76_RS27425 -1.1 -1.6 DNA-directed RNA polymerase subunit omega compare
BWI76_RS25600 -1.1 -1.1 tRNA-Thr compare
BWI76_RS18455 -1.1 -1.4 tRNA-Ser compare
BWI76_RS25315 -1.1 -6.8 glutamate synthase large subunit compare
BWI76_RS07185 -1.1 -1.7 hypothetical protein compare
BWI76_RS06080 -1.0 -2.4 taurine dioxygenase compare
BWI76_RS09960 -1.0 -3.0 Lon protease compare
BWI76_RS26390 -1.0 -3.0 cell division protein FtsX compare
BWI76_RS02220 -1.0 -2.8 carbon-phosphorus lyase subunit PhnH compare
BWI76_RS08525 -1.0 -2.0 colicin transporter compare
BWI76_RS14075 -1.0 -1.4 TetR family transcriptional regulator compare
BWI76_RS01220 -1.0 -4.7 DNA-dependent helicase II compare
BWI76_RS15835 -1.0 -0.7 hypothetical protein compare
BWI76_RS15810 -1.0 -3.7 hypothetical protein compare
BWI76_RS01200 -1.0 -1.3 diaminopimelate epimerase compare
BWI76_RS15060 -1.0 -2.9 MarR family transcriptional regulator compare
BWI76_RS03225 -1.0 -4.7 transcriptional regulator compare
BWI76_RS16955 -1.0 -1.3 hypothetical protein compare
BWI76_RS14835 -1.0 -1.4 hypothetical protein compare
BWI76_RS25320 -1.0 -3.7 glutamate synthase compare
BWI76_RS19040 -0.9 -4.1 hypothetical protein compare
BWI76_RS11010 -0.9 -1.5 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS25705 -0.9 -3.4 hypothetical protein compare
BWI76_RS09640 -0.9 -3.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS11435 -0.9 -0.8 hypothetical protein compare
BWI76_RS19325 -0.9 -1.5 mandelate racemase compare
BWI76_RS14775 -0.9 -1.7 creatinine amidohydrolase compare
BWI76_RS02410 -0.9 -1.1 EF-P beta-lysylation protein EpmB compare
BWI76_RS15680 -0.9 -3.0 hypothetical protein compare
BWI76_RS09315 -0.9 -1.3 hypothetical protein compare
BWI76_RS15715 -0.9 -2.1 putative ninG protein compare
BWI76_RS06475 -0.9 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS01890 -0.9 -3.7 transcriptional regulator Zur compare
BWI76_RS16090 -0.9 -1.3 two-component system response regulator DcuR compare
BWI76_RS10465 -0.9 -2.0 hypothetical protein compare
BWI76_RS03665 -0.9 -1.0 ABC transporter ATP-binding protein compare
BWI76_RS20970 -0.8 -1.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS15840 -0.8 -1.7 prophage protein compare
BWI76_RS20475 -0.8 -3.1 phospholipid-binding lipoprotein MlaA compare
BWI76_RS05120 -0.8 -3.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS10640 -0.8 -2.4 AraC family transcriptional regulator compare
BWI76_RS23265 -0.8 -2.6 hypothetical protein compare
BWI76_RS24955 -0.8 -1.3 hypothetical protein compare
BWI76_RS27435 -0.8 -3.0 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS07995 -0.8 -2.1 twin-arginine translocase subunit TatA compare
BWI76_RS07380 -0.8 -2.0 hypothetical protein compare
BWI76_RS18415 -0.8 -2.2 very short patch repair endonuclease compare
BWI76_RS25925 -0.8 -1.3 hypothetical protein compare
BWI76_RS11105 -0.8 -1.2 aminodeoxychorismate lyase compare
BWI76_RS27040 -0.8 -3.8 xylose ABC transporter permease compare
BWI76_RS02610 -0.8 -2.6 transcriptional regulator compare
BWI76_RS09190 -0.8 -2.4 hypothetical protein compare
BWI76_RS01775 -0.8 -1.0 hypothetical protein compare
BWI76_RS24605 -0.8 -5.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS26080 -0.8 -1.9 cell division protein DamX compare
BWI76_RS21445 -0.8 -2.6 hypothetical protein compare
BWI76_RS00760 -0.8 -1.5 cell division protein FtsN compare
BWI76_RS05570 -0.8 -0.9 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-Xylose in Klebsiella michiganensis M5al

For carbon source D-Xylose across organisms