Experiment set5IT034 for Klebsiella michiganensis M5al

Compare to:

D-Xylose carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS23125 +1.1 1.7 propanediol dehydratase small subunit compare
BWI76_RS10575 +1.1 2.3 polar amino acid ABC transporter permease compare
BWI76_RS24575 +1.1 1.6 hypothetical protein compare
BWI76_RS12485 +1.0 2.9 TyrR family transcriptional regulator compare
BWI76_RS12385 +1.0 6.3 DNA polymerase V subunit UmuC compare
BWI76_RS11675 +1.0 1.4 arginine N-succinyltransferase compare
BWI76_RS12200 +1.0 4.3 hypothetical protein compare
BWI76_RS11440 +0.9 1.5 hypothetical protein compare
BWI76_RS19585 +0.9 2.8 gentisate 1,2-dioxygenase compare
BWI76_RS16935 +0.9 1.4 shikimate dehydrogenase compare
BWI76_RS12290 +0.9 2.8 hypothetical protein compare
BWI76_RS02775 +0.9 4.7 outer membrane protein assembly factor compare
BWI76_RS05810 +0.9 1.6 hypothetical protein compare
BWI76_RS17860 +0.9 2.1 YoaH family protein compare
BWI76_RS21565 +0.9 1.4 outer membrane protein assembly factor BamE compare
BWI76_RS00715 +0.9 3.0 two-component sensor histidine kinase compare
BWI76_RS15150 +0.8 3.0 outer membrane efflux protein compare
BWI76_RS19770 +0.8 1.9 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS24810 +0.8 1.2 hypothetical protein compare
BWI76_RS12040 +0.8 1.3 hypothetical protein compare
BWI76_RS25480 +0.8 2.2 ribonuclease E/G compare
BWI76_RS02780 +0.8 6.2 translocation and assembly module TamB compare
BWI76_RS12215 +0.8 3.4 HNH endonuclease compare
BWI76_RS12370 +0.8 5.4 hypothetical protein compare
BWI76_RS20230 +0.8 1.1 hypothetical protein compare
BWI76_RS06325 +0.8 1.8 hypothetical protein compare
BWI76_RS12240 +0.8 3.2 terminase small subunit compare
BWI76_RS16240 +0.8 1.6 anti-adapter protein IraM compare
BWI76_RS13415 +0.8 3.2 spermidine/putrescine ABC transporter permease compare
BWI76_RS12410 +0.8 3.7 hypothetical protein compare
BWI76_RS19860 +0.8 2.7 hypothetical protein compare
BWI76_RS04060 +0.8 1.5 hypothetical protein compare
BWI76_RS08380 +0.8 1.3 endonuclease VIII compare
BWI76_RS21345 +0.8 2.0 sigma-E factor regulatory protein RseB compare
BWI76_RS12265 +0.8 3.1 hypothetical protein compare
BWI76_RS18780 +0.8 2.3 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS14575 +0.7 1.6 TENA/THI-4 family protein compare
BWI76_RS15290 +0.7 1.3 transcriptional regulator compare
BWI76_RS20900 +0.7 1.0 outer membrane protein assembly factor BamC compare
BWI76_RS05045 +0.7 2.4 general secretion pathway protein GspM compare
BWI76_RS08330 +0.7 1.4 hypothetical protein compare
BWI76_RS21130 +0.7 1.1 Fe-S assembly protein IscX compare
BWI76_RS17200 +0.7 1.4 hypothetical protein compare
BWI76_RS12335 +0.7 3.1 hypothetical protein compare
BWI76_RS19310 +0.7 1.3 ABC transporter permease compare
BWI76_RS11125 +0.7 1.3 metal-dependent hydrolase compare
BWI76_RS09820 +0.7 2.5 hypothetical protein compare
BWI76_RS22640 +0.7 1.8 hypothetical protein compare
BWI76_RS12360 +0.7 4.5 hypothetical protein compare
BWI76_RS12185 +0.7 2.4 hypothetical protein compare
BWI76_RS12255 +0.7 4.8 hypothetical protein compare
BWI76_RS14005 +0.7 1.5 TetR family transcriptional regulator compare
BWI76_RS08350 +0.7 1.2 carboxylase compare
BWI76_RS04970 +0.7 1.9 ABC transporter permease compare
BWI76_RS12470 +0.7 1.3 thiosulfate sulfurtransferase PspE compare
BWI76_RS12465 +0.7 1.0 phage shock protein D compare
BWI76_RS21905 +0.7 3.3 class II aldolase compare
BWI76_RS16470 +0.7 1.2 transcriptional repressor NemR compare
BWI76_RS20720 +0.7 0.8 hypothetical protein compare
BWI76_RS09335 +0.7 1.0 baseplate assembly protein W compare
BWI76_RS12300 +0.7 3.9 hypothetical protein compare
BWI76_RS21740 +0.7 2.1 transcriptional regulator, LysR family protein compare
BWI76_RS13215 +0.7 1.2 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS16485 +0.7 1.3 ribonuclease T compare
BWI76_RS19870 +0.7 1.7 malate:quinone oxidoreductase compare
BWI76_RS22850 +0.6 1.9 tRNA pseudouridine synthase TruC compare
BWI76_RS08735 +0.6 2.0 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS09395 +0.6 2.7 late control gene D protein compare
BWI76_RS13685 +0.6 1.5 IclR family transcriptional regulator compare
BWI76_RS14390 +0.6 0.8 hypothetical protein compare
BWI76_RS09560 +0.6 1.7 DoxX family membrane protein compare
BWI76_RS14755 +0.6 2.2 SIS domain-containing protein compare
BWI76_RS08600 +0.6 1.7 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS12350 +0.6 3.9 kinase compare
BWI76_RS12790 +0.6 1.1 lactate dehydrogenase compare
BWI76_RS20850 +0.6 3.2 oxidoreductase FeS-binding subunit compare
BWI76_RS12250 +0.6 3.8 terminase compare
BWI76_RS15260 +0.6 1.3 hypothetical protein compare
BWI76_RS00795 +0.6 1.7 carboxymuconolactone decarboxylase compare
BWI76_RS12220 +0.6 3.7 hypothetical protein compare
BWI76_RS07640 +0.6 1.0 short chain dehydrogenase compare
BWI76_RS23895 +0.6 1.2 Xaa-Pro aminopeptidase compare
BWI76_RS10245 +0.6 1.7 aspartate aminotransferase compare
BWI76_RS12275 +0.6 3.6 hypothetical protein compare
BWI76_RS12115 +0.6 3.4 hypothetical protein compare
BWI76_RS12400 +0.6 3.1 TetR family transcriptional regulator compare
BWI76_RS16015 +0.6 2.4 pheromone autoinducer 2 transporter compare
BWI76_RS16140 +0.6 2.1 3-oxoadipate CoA-transferase compare
BWI76_RS25240 +0.6 1.3 D-arabinose 5-phosphate isomerase compare
BWI76_RS12285 +0.6 1.8 hypothetical protein compare
BWI76_RS13360 +0.6 2.1 benzoate transporter compare
BWI76_RS02855 +0.6 1.2 cytochrome B562 compare
BWI76_RS17180 +0.6 1.5 hypothetical protein compare
BWI76_RS23305 +0.6 2.3 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS15350 +0.6 1.1 hypothetical protein compare
BWI76_RS17770 +0.6 1.2 isomerase/hydrolase compare
BWI76_RS09135 +0.6 2.6 oxidoreductase compare
BWI76_RS10435 +0.6 2.1 suppressor for copper-sensitivity C compare
BWI76_RS01245 +0.6 2.7 DNA helicase RecQ compare
BWI76_RS22815 +0.6 4.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS17945 +0.6 1.0 hypothetical protein compare
BWI76_RS26665 +0.6 1.3 DNA-binding response regulator compare
BWI76_RS12230 +0.6 3.3 hypothetical protein compare
BWI76_RS20560 +0.6 2.2 hypothetical protein compare
BWI76_RS26285 +0.6 2.7 glycerophosphodiester phosphodiesterase compare
BWI76_RS16055 +0.6 1.7 malonate decarboxylase subunit epsilon compare
BWI76_RS27455 +0.6 1.4 DUF805 domain-containing protein compare
BWI76_RS19140 +0.6 2.3 citrate (Si)-synthase compare
BWI76_RS22620 +0.6 1.7 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS15475 +0.6 3.2 NAD(P)-dependent oxidoreductase compare
BWI76_RS06130 +0.6 1.6 extensin family protein compare
BWI76_RS06075 +0.6 2.1 taurine transporter subunit compare
BWI76_RS00725 +0.6 1.9 periplasmic repressor CpxP compare
BWI76_RS12380 +0.6 3.3 DNA polymerase V subunit UmuD compare
BWI76_RS22265 +0.6 2.5 NADH:flavorubredoxin oxidoreductase compare
BWI76_RS24470 +0.6 3.3 hypothetical protein compare
BWI76_RS12270 +0.6 2.7 hypothetical protein compare
BWI76_RS10895 +0.6 3.0 phosphatase compare
BWI76_RS08780 +0.6 1.3 ABC transporter compare
BWI76_RS26485 +0.6 3.4 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
BWI76_RS12305 +0.6 2.0 hypothetical protein compare
BWI76_RS24265 +0.6 2.2 dienelactone hydrolase compare
BWI76_RS13820 +0.5 1.5 hypothetical protein compare
BWI76_RS20675 +0.5 2.2 GMP synthase compare
BWI76_RS15050 +0.5 2.4 sugar transporter compare
BWI76_RS23705 +0.5 2.5 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS10745 +0.5 0.8 hypothetical protein compare
BWI76_RS08210 +0.5 1.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS21910 +0.5 1.8 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS00240 +0.5 1.6 FMN-binding protein MioC compare
BWI76_RS10570 +0.5 2.0 cysteine ABC transporter substrate-binding protein compare
BWI76_RS12195 +0.5 2.4 hypothetical protein compare
BWI76_RS12375 +0.5 1.3 DNA-invertase hin compare
BWI76_RS12180 +0.5 2.7 membrane protein compare
BWI76_RS12205 +0.5 2.0 hypothetical protein compare
BWI76_RS26505 +0.5 1.5 nickel ABC transporter permease subunit NikB compare
BWI76_RS16400 +0.5 1.6 pyridoxal kinase compare
BWI76_RS15135 +0.5 1.8 hypothetical protein compare
BWI76_RS09555 +0.5 1.6 pyruvate oxidase compare
BWI76_RS12325 +0.5 4.1 hypothetical protein compare
BWI76_RS12295 +0.5 1.8 hypothetical protein compare
BWI76_RS13135 +0.5 1.3 3-oxoadipyl-CoA thiolase compare
BWI76_RS18885 +0.5 1.3 nitrogen fixation regulatory protein compare
BWI76_RS16370 +0.5 2.6 electron transport complex subunit D compare
BWI76_RS12925 +0.5 2.3 efflux transporter periplasmic adaptor subunit compare
BWI76_RS05515 +0.5 2.1 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
BWI76_RS15920 +0.5 1.0 hypothetical protein compare
BWI76_RS27675 +0.5 2.5 EmrB/QacA family drug resistance transporter compare
BWI76_RS25510 +0.5 1.9 oxidoreductase compare
BWI76_RS19535 +0.5 1.7 putative integral membrane protein compare
BWI76_RS21390 +0.5 1.9 thiol disulfide reductase thioredoxin compare
BWI76_RS12365 +0.5 3.3 hypothetical protein compare
BWI76_RS12780 +0.5 1.5 hypothetical protein compare
BWI76_RS02920 +0.5 1.5 addiction module toxin RelE compare
BWI76_RS12210 +0.5 3.1 hypothetical protein compare
BWI76_RS12405 +0.5 2.3 diguanylate phosphodiesterase compare
BWI76_RS20845 +0.5 2.2 GDP-mannose pyrophosphatase NudK compare
BWI76_RS18115 +0.5 2.2 pyruvate kinase compare
BWI76_RS06065 +0.5 2.7 taurine ABC transporter substrate-binding protein compare
BWI76_RS20795 +0.5 0.7 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS18230 +0.5 1.5 trehalose-6-phosphate synthase compare
BWI76_RS07755 +0.5 1.6 isochorismatase compare
BWI76_RS27820 +0.5 1.0 ilvB operon leader peptide IvbL compare
BWI76_RS13100 +0.5 2.0 phenylacetate-CoA oxygenase subunit PaaI compare
BWI76_RS15660 +0.5 0.5 hypothetical protein compare
BWI76_RS21850 +0.5 2.7 AraC family transcriptional regulator compare
BWI76_RS16220 +0.5 1.3 hypothetical protein compare
BWI76_RS07705 +0.5 1.2 enterochelin esterase compare
BWI76_RS04925 +0.5 2.0 spermidine synthase compare
BWI76_RS19195 +0.5 1.9 nickel ABC transporter permease compare
BWI76_RS27630 +0.5 1.8 antibiotic biosynthesis monooxygenase compare
BWI76_RS13970 +0.5 0.9 ABC transporter compare
BWI76_RS26020 +0.5 1.4 peptidylprolyl isomerase A compare
BWI76_RS17165 +0.5 1.8 hypothetical protein compare
BWI76_RS23060 +0.5 1.6 cobalt-precorrin-4 C(11)-methyltransferase compare
BWI76_RS15095 +0.5 1.0 isochorismatase compare
BWI76_RS25220 +0.5 1.5 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS21925 +0.5 2.6 agmatinase compare
BWI76_RS15235 +0.5 1.5 hypothetical protein compare
BWI76_RS19520 +0.5 1.9 acetyltransferase GCN5 compare
BWI76_RS26475 +0.5 3.2 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
BWI76_RS15120 +0.5 1.6 hypothetical protein compare
BWI76_RS16830 +0.5 2.2 ABC transporter compare
BWI76_RS11775 +0.5 1.4 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS02900 +0.5 2.7 6-phosphogluconolactonase compare
BWI76_RS21375 +0.5 0.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS03610 +0.5 1.1 hypothetical protein compare
BWI76_RS09935 +0.5 2.4 paraquat-inducible membrane protein A compare
BWI76_RS21710 +0.5 1.9 nitroreductase compare
BWI76_RS10870 +0.5 2.3 nicotinamidase compare
BWI76_RS03515 +0.5 1.6 hypothetical protein compare
BWI76_RS09120 +0.5 2.1 hypothetical protein compare
BWI76_RS17465 +0.5 3.0 C4-dicarboxylic acid transporter DauA compare
BWI76_RS09515 +0.5 1.1 arginine ABC transporter substrate-binding protein compare
BWI76_RS16785 +0.5 0.9 peptidase M20 compare
BWI76_RS01630 +0.5 0.7 16S ribosomal RNA compare
BWI76_RS04700 +0.5 1.7 acetolactate synthase small subunit compare
BWI76_RS16900 +0.5 1.2 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS01270 +0.5 2.5 hypothetical protein compare
BWI76_RS16980 +0.5 0.9 bifunctional cysteine desulfurase/selenocysteine lyase compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-Xylose in Klebsiella michiganensis M5al

For carbon source D-Xylose across organisms