Experiment set5IT033 for Pantoea sp. MT58

Survival; Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50

Group: survival
Media: + Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50
Culturing: MT058_ML2, tube, Aerobic, at 30 (C)
By: Mike Thorgersen on 9/14/21

Specific Phenotypes

For 3 genes in this experiment

For survival Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 in Pantoea sp. MT58

For survival Treatment=FW300 (pH7.4); TreatmentDuration=24hrs; Outgrowth=LBkan50 across organisms

SEED Subsystems

Subsystem	#Specific
Coenzyme A Biosynthesis	1
High affinity phosphate transporter and control of PHO regulon	1
Phosphate metabolism	1
Ribonucleotide reduction	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Purine metabolism
• Pyrimidine metabolism
• Pantothenate and CoA biosynthesis

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
pyrimidine deoxyribonucleotides de novo biosynthesis II	7	7	2
guanosine deoxyribonucleotides de novo biosynthesis II	4	4	1
adenosine deoxyribonucleotides de novo biosynthesis II	4	4	1
phosphopantothenate biosynthesis I	4	4	1
phosphopantothenate biosynthesis III (archaea)	4	2	1
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)	14	14	2
superpathway of adenosine nucleotides de novo biosynthesis II	7	7	1
superpathway of guanosine nucleotides de novo biosynthesis II	8	8	1
superpathway of coenzyme A biosynthesis I (bacteria)	9	9	1
superpathway of coenzyme A biosynthesis II (plants)	10	5	1
superpathway of purine nucleotides de novo biosynthesis II	26	26	2
superpathway of histidine, purine, and pyrimidine biosynthesis	46	46	2