Experiment set5IT032 for Pseudomonas fluorescens FW300-N2E3

Compare to:

Adenosine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_20695 -4.6 -6.3 O-succinylhomoserine sulfhydrylase compare
AO353_07220 -4.4 -7.4 anthranilate synthase compare
AO353_05115 -4.4 -10.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_12520 -4.3 -11.2 glutamate synthase compare
AO353_13070 -4.3 -8.2 phosphoserine phosphatase compare
AO353_08185 -4.3 -9.1 methionine biosynthesis protein MetW compare
AO353_20635 -4.2 -12.6 3-isopropylmalate dehydrogenase compare
AO353_13165 -4.2 -5.7 ATP phosphoribosyltransferase regulatory subunit compare
AO353_07230 -4.1 -16.0 anthranilate synthase compare
AO353_07210 -4.1 -4.9 indole-3-glycerol-phosphate synthase compare
AO353_20625 -4.0 -4.7 3-isopropylmalate dehydratase compare
AO353_12070 -4.0 -9.6 imidazoleglycerol-phosphate dehydratase compare
AO353_12515 -4.0 -22.4 glutamate synthase compare
AO353_08180 -3.9 -13.2 homoserine O-acetyltransferase compare
AO353_12085 -3.9 -9.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_00310 -3.9 -10.5 transaldolase compare
AO353_20665 -3.9 -11.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_14505 -3.8 -12.7 ketol-acid reductoisomerase compare
AO353_10710 -3.8 -2.6 tryptophan synthase subunit beta compare
AO353_02070 -3.8 -8.0 prephenate dehydratase compare
AO353_08475 -3.7 -10.2 phosphoserine phosphatase compare
AO353_08510 -3.7 -5.7 3-phosphoglycerate dehydrogenase compare
AO353_08345 -3.7 -9.2 dihydroxy-acid dehydratase compare
AO353_05110 -3.5 -11.7 histidinol dehydrogenase compare
AO353_21615 -3.5 -14.1 methionine synthase compare
AO353_07215 -3.5 -8.3 anthranilate phosphoribosyltransferase compare
AO353_12365 -3.4 -5.2 phosphoribosyl-AMP cyclohydrolase compare
AO353_12500 -3.4 -2.4 shikimate kinase compare
AO353_02090 -3.3 -11.0 N-ethylammeline chlorohydrolase conserved
AO353_07155 -3.3 -6.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_04155 -3.3 -12.5 ornithine carbamoyltransferase compare
AO353_20175 -3.3 -3.2 ATP-dependent Clp protease proteolytic subunit compare
AO353_02075 -3.3 -12.9 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_02595 -3.2 -4.3 cobalamin synthase compare
AO353_02610 -3.2 -7.3 adenosylcobinamide kinase compare
AO353_08685 -3.1 -8.8 N-acetylglutamate synthase compare
AO353_20620 -3.1 -6.6 isopropylmalate isomerase compare
AO353_12075 -3.1 -9.6 imidazole glycerol phosphate synthase subunit HisH compare
AO353_14495 -3.0 -12.6 acetolactate synthase 3 catalytic subunit compare
AO353_08780 -3.0 -9.0 5-formyltetrahydrofolate cyclo-ligase compare
AO353_02640 -2.9 -2.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO353_04105 -2.9 -9.2 argininosuccinate synthase compare
AO353_13610 -2.9 -6.2 precorrin isomerase compare
AO353_12090 -2.9 -2.8 imidazole glycerol phosphate synthase subunit HisF compare
AO353_06495 -2.8 -6.8 gamma-glutamyl phosphate reductase compare
AO353_13620 -2.8 -12.3 precorrin-3B C17-methyltransferase compare
AO353_08015 -2.8 -8.6 5,10-methylenetetrahydrofolate reductase compare
AO353_02615 -2.8 -9.5 cobyric acid synthase compare
AO353_15925 -2.8 -11.6 2-isopropylmalate synthase compare
AO353_09000 -2.8 -5.9 argininosuccinate lyase compare
AO353_07525 -2.7 -14.3 biotin synthase compare
AO353_14115 -2.6 -8.0 gamma-glutamyl kinase compare
AO353_02710 -2.6 -13.2 (p)ppGpp synthetase compare
AO353_02600 -2.5 -3.4 alpha-ribazole phosphatase compare
AO353_02635 -2.5 -10.4 cobyrinic acid a,c-diamide synthase compare
AO353_07505 -2.5 -10.1 dethiobiotin synthetase compare
AO353_13605 -2.5 -11.1 oxidoreductase compare
AO353_02605 -2.5 -8.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO353_13615 -2.4 -15.1 precorrin-2 C20-methyltransferase compare
AO353_13600 -2.4 -5.3 precorrin-6Y C5,15-methyltransferase compare
AO353_14500 -2.4 -7.8 acetolactate synthase 3 regulatory subunit compare
AO353_12360 -2.4 -9.3 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_02320 -2.4 -8.6 allantoinase compare
AO353_08045 -2.4 -13.8 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_02625 -2.3 -11.7 cobalamin biosynthesis protein CobD compare
AO353_21660 -2.3 -12.7 cobalamin biosynthesis protein CobN compare
AO353_02325 -2.3 -5.0 OHCU decarboxylase compare
AO353_21665 -2.2 -6.1 magnesium chelatase compare
AO353_09240 -2.2 -3.4 acetylglutamate kinase compare
AO353_10025 -2.2 -13.5 pyruvate carboxylase subunit B compare
AO353_07520 -2.2 -12.4 8-amino-7-oxononanoate synthase compare
AO353_07510 -2.2 -9.7 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_10030 -2.2 -10.9 pyruvate carboxylase subunit A compare
AO353_15250 -2.1 -4.3 cytochrome B compare
AO353_08165 -2.1 -4.0 pyrroline-5-carboxylate reductase compare
AO353_03590 -2.1 -3.9 crossover junction endodeoxyribonuclease RuvC compare
AO353_13590 -2.1 -5.5 cobalt-precorrin-6X reductase compare
AO353_00495 -2.1 -3.3 DNA topoisomerase I compare
AO353_21630 -2.0 -3.5 precorrin-4 C11-methyltransferase compare
AO353_03580 -2.0 -4.0 ATP-dependent DNA helicase RuvB compare
AO353_16940 -2.0 -5.9 deoxycytidine triphosphate deaminase compare
AO353_09915 -1.9 -6.8 long-chain acyl-CoA thioester hydrolase compare
AO353_12115 -1.9 -2.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_21655 -1.9 -3.0 cobalamin biosynthesis protein CobW compare
AO353_21635 -1.9 -3.2 cobalamin biosynthesis protein CobE compare
AO353_01375 -1.9 -6.3 phosphate acyltransferase compare
AO353_12105 -1.9 -6.6 peptidase S41 compare
AO353_02720 -1.9 -5.5 cysteine synthase compare
AO353_09720 -1.9 -1.6 hypothetical protein compare
AO353_19145 -1.8 -4.8 protease HtpX compare
AO353_00650 -1.8 -3.3 cytochrome biogenesis protein compare
AO353_22800 -1.8 -3.5 sulfite reductase compare
AO353_11165 -1.8 -8.9 hypothetical protein compare
AO353_10705 -1.8 -4.3 tryptophan synthase subunit alpha compare
AO353_21625 -1.7 -2.8 Fe/S biogenesis protein NfuA compare
AO353_03360 -1.7 -7.9 glucose-6-phosphate dehydrogenase compare
AO353_02250 -1.7 -3.3 chorismate synthase compare
AO353_06045 -1.7 -5.8 exodeoxyribonuclease V subunit beta compare
AO353_02620 -1.7 -5.2 threonine-phosphate decarboxylase conserved
AO353_08075 -1.7 -8.3 hemolysin III compare
AO353_14775 -1.7 -6.2 hypothetical protein compare
AO353_10035 -1.6 -6.7 LysR family transcriptional regulator compare
AO353_09745 -1.6 -2.4 hypothetical protein compare
AO353_12420 -1.6 -3.4 predicted FeS cluster maintenance protein (from data) compare
AO353_08470 -1.5 -4.8 RNA pyrophosphohydrolase compare
AO353_03415 -1.5 -5.0 glucokinase compare
AO353_13595 -1.5 -6.7 cobalt-precorrin-6A synthase compare
AO353_13160 -1.5 -2.7 membrane protease HflC compare
AO353_06040 -1.5 -3.8 exodeoxyribonuclease V subunit alpha compare
AO353_06050 -1.5 -6.2 exodeoxyribonuclease V subunit gamma compare
AO353_09155 -1.5 -5.9 amino acid dehydrogenase compare
AO353_00825 -1.5 -3.9 porin compare
AO353_02330 -1.5 -2.7 allantoicase compare
AO353_14420 -1.4 -4.3 molecular chaperone DnaK compare
AO353_15295 -1.4 -4.9 division/cell wall cluster transcriptional repressor MraZ compare
AO353_20370 -1.4 -3.3 MerR family transcriptional regulator compare
AO353_04220 -1.4 -4.4 chemotaxis protein CheY compare
AO353_16425 -1.4 -2.1 Fe-S metabolism protein SufE compare
AO353_13155 -1.4 -3.9 hypothetical protein compare
AO353_08560 -1.3 -6.5 spermidine/putrescine ABC transporter permease compare
AO353_10670 -1.3 -6.0 shikimate dehydrogenase compare
AO353_14590 -1.3 -2.2 serine kinase/phosphatase compare
AO353_04355 -1.3 -2.2 homoserine dehydrogenase compare
AO353_02315 -1.3 -5.0 5-hydroxyisourate hydrolase compare
AO353_20110 -1.3 -6.1 MFS transporter compare
AO353_20095 -1.3 -4.1 histidine kinase compare
AO353_19090 -1.3 -1.8 MarR family transcriptional regulator compare
AO353_27650 -1.3 -4.1 cell division protein FtsK compare
AO353_02810 -1.3 -6.2 histidine kinase compare
AO353_10630 -1.3 -3.6 16S rRNA methyltransferase compare
AO353_20565 -1.3 -2.0 tRNA-Ala compare
AO353_10925 -1.2 -6.3 hypothetical protein compare
AO353_21640 -1.2 -1.9 cobalt transporter compare
AO353_20845 -1.2 -4.5 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) compare
AO353_20835 -1.2 -3.7 Ribokinase (EC 2.7.1.15) (from data) compare
AO353_18285 -1.2 -3.4 3-phosphoglycerate kinase compare
AO353_02550 -1.2 -3.0 TetR family transcriptional regulator compare
AO353_25585 -1.2 -2.4 argininosuccinate lyase compare
AO353_04055 -1.2 -2.3 methionine--tRNA ligase compare
AO353_14795 -1.2 -4.2 molybdopterin-synthase adenylyltransferase compare
AO353_10430 -1.2 -3.1 chromosome partitioning protein ParB compare
AO353_00750 -1.2 -3.2 GntR family transcriptional regulator compare
AO353_20540 -1.2 -4.8 aromatic amino acid aminotransferase compare
AO353_20170 -1.1 -4.1 trigger factor compare
AO353_04565 -1.1 -4.5 nucleoid-associated protein compare
AO353_19060 -1.1 -3.9 CysB family transcriptional regulator compare
AO353_18560 -1.1 -2.1 class I peptide chain release factor compare
AO353_09890 -1.1 -3.7 phosphate ABC transporter ATP-binding protein compare
AO353_20785 -1.1 -4.1 carbon storage regulator CsrA compare
AO353_00610 -1.1 -1.3 cytochrome C oxidase Cbb3 compare
AO353_05010 -1.1 -2.4 HopJ type III effector protein compare
AO353_08565 -1.1 -7.1 spermidine/putrescine ABC transporter permease compare
AO353_03020 -1.1 -5.7 arginine N-succinyltransferase compare
AO353_15480 -1.1 -2.2 hypothetical protein compare
AO353_00740 -1.1 -5.6 molybdenum cofactor sulfurylase compare
AO353_18780 -1.1 -4.7 cobyrinic acid a,c-diamide synthase compare
AO353_16375 -1.0 -1.9 hypothetical protein compare
AO353_26645 -1.0 -3.1 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
AO353_05340 -1.0 -3.5 histidine kinase compare
AO353_27725 -1.0 -2.9 GNAT family acetyltransferase compare
AO353_05625 -1.0 -1.4 transcription elongation factor GreA compare
AO353_07355 -1.0 -4.3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_05130 -1.0 -1.5 anti-anti-sigma factor compare
AO353_13100 -1.0 -1.3 GTPase RsgA compare
AO353_03655 -1.0 -3.5 cobalamin adenosyltransferase compare
AO353_13095 -1.0 -2.7 flagellar motor protein MotB compare
AO353_16805 -1.0 -4.0 recombinase RecA compare
AO353_08570 -1.0 -5.4 transporter compare
AO353_03585 -1.0 -1.6 ATP-dependent DNA helicase RuvA compare
AO353_11940 -1.0 -2.5 hypothetical protein compare
AO353_19360 -1.0 -1.5 peroxiredoxin compare
AO353_03100 -0.9 -2.0 XRE family transcriptional regulator compare
AO353_07205 -0.9 -4.1 lipoate--protein ligase compare
AO353_03545 -0.9 -4.1 hypothetical protein compare
AO353_17650 -0.9 -3.5 response regulator SirA compare
AO353_28425 -0.9 -2.7 TetR family transcriptional regulator compare
AO353_13395 -0.9 -2.2 protein hupE compare
AO353_05800 -0.9 -3.4 hypothetical protein compare
AO353_27950 -0.9 -1.9 hypothetical protein compare
AO353_00735 -0.9 -6.7 xanthine dehydrogenase compare
AO353_02040 -0.9 -1.8 integration host factor subunit beta compare
AO353_03630 -0.9 -6.3 porin compare
AO353_27400 -0.9 -2.1 hypothetical protein compare
AO353_11750 -0.8 -1.9 ATPase compare
AO353_07075 -0.8 -3.1 elongation factor Tu compare
AO353_11530 -0.8 -4.5 diguanylate cyclase compare
AO353_22025 -0.8 -1.7 iron-sulfur cluster repair di-iron protein compare
AO353_12145 -0.8 -2.8 nitrogen regulation protein NR(I) compare
AO353_01220 -0.8 -2.0 hypothetical protein compare
AO353_03420 -0.8 -2.8 phosphogluconate dehydratase compare
AO353_25945 -0.8 -2.0 hypothetical protein compare
AO353_01310 -0.8 -3.2 radical SAM protein compare
AO353_19170 -0.8 -4.6 histidine kinase compare
AO353_09140 -0.8 -4.5 XRE family transcriptional regulator compare
AO353_03815 -0.8 -1.3 heme utilization protein compare
AO353_24130 -0.8 -2.3 hypothetical protein compare
AO353_03525 -0.8 -4.8 quinolinate synthase A compare
AO353_24440 -0.8 -1.9 reactive intermediate/imine deaminase compare
AO353_14595 -0.8 -3.9 carbonate dehydratase compare
AO353_00835 -0.8 -3.8 transporter compare


Specific Phenotypes

For 8 genes in this experiment

For nitrogen source Adenosine in Pseudomonas fluorescens FW300-N2E3

For nitrogen source Adenosine across organisms