Experiment set5IT028 for Pseudomonas fluorescens FW300-N1B4

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Minimal media pH9

Genes with specific phenotypes:

  gene name fitness t score description  
Pf1N1B4_630 -3.7 -7.2 TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain compare
Pf1N1B4_3696 -3.5 -14.2 FIG00955360: hypothetical protein compare
Pf1N1B4_596 -3.3 -6.6 Glucose ABC transport system, periplasmic sugar-binding protein compare
Pf1N1B4_1447 -2.4 -11.8 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) compare
Pf1N1B4_2331 -2.4 -5.3 Thiazole biosynthesis protein ThiG compare
Pf1N1B4_2718 -2.3 -5.0 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) compare
Pf1N1B4_1114 -2.2 -5.5 ABC transporter, ATP-binding protein compare
Pf1N1B4_1733 -2.1 -9.3 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) compare
Pf1N1B4_621 -1.9 -6.9 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) compare
Pf1N1B4_2143 -1.9 -8.0 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system compare
Pf1N1B4_3996 -1.8 -6.0 Histone acetyltransferase HPA2 and related acetyltransferases compare
Pf1N1B4_654 -1.8 -7.1 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) / Thiamin-phosphate pyrophosphorylase-like protein compare
Pf1N1B4_1586 -1.6 -6.6 Purine-cytosine permease compare
Pf1N1B4_1144 -1.3 -6.3 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) compare
Pf1N1B4_2957 -1.3 -6.3 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) compare
Pf1N1B4_2687 -1.2 -5.9 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) compare
Pf1N1B4_2504 -1.0 -5.1 5-aminopentanamidase (EC 3.5.1.30) (from data) compare
Pf1N1B4_3431 +1.1 6.5 ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) compare
Pf1N1B4_3482 +1.1 7.2 outer membrane protein H1 compare
Pf1N1B4_1306 +1.2 10.6 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) compare
Pf1N1B4_1183 +1.2 9.0 Sodium-dependent transporter family protein compare
Pf1N1B4_3496 +1.3 8.2 Cytochrome c-type biogenesis protein ResA compare
Pf1N1B4_5045 +1.3 5.1 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone compare
Pf1N1B4_3433 +1.3 8.1 ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data) compare
Pf1N1B4_3432 +1.3 7.4 ABC transporter for L-Arginine and L-Citrulline, permease component 1 (from data) compare
Pf1N1B4_5636 +1.3 8.7 Histidine kinase/response regulator hybrid protein compare
Pf1N1B4_2934 +1.4 9.8 Uracil phosphoribosyltransferase (EC 2.4.2.9) compare
Pf1N1B4_3437 +1.4 6.1 Arginine pathway regulatory protein ArgR, repressor of arg regulon compare
Pf1N1B4_1887 +1.4 5.3 probable exported protein YPO0432 compare
Pf1N1B4_366 +1.4 9.1 FIG00954136: hypothetical protein compare
Pf1N1B4_3440 +1.5 10.0 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
Pf1N1B4_2947 +1.8 7.5 Restriction endonuclease compare
Pf1N1B4_1337 +1.9 12.8 Outer membrane receptor proteins, mostly Fe transport compare
Pf1N1B4_2637 +1.9 8.1 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) compare