Experiment set5IT027 for Pseudomonas fluorescens FW300-N2E3

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Carnitine Hydrochloride nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
AO353_07680 -3.5 -13.3 Rieske (2Fe-2S) protein conserved
AO353_07660 -3.1 -12.6 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming), beta subunit (EC 1.5.3.24) (from data) conserved
AO353_07750 -3.1 -10.5 carnitine 3-dehydrogenase [EC:1.1.1.108] (from data) conserved
AO353_07650 -3.1 -17.4 sarcosine oxidase subunit alpha conserved
AO353_07705 -3.1 -12.9 DgcB Dimethylglycine demethylase subunit B (EC 1.5.3.-) (from data) conserved
AO353_07695 -3.0 -6.0 electron transfer flavoprotein subunit beta compare
AO353_07675 -2.9 -12.0 ferredoxin conserved
AO353_07715 -2.9 -11.6 hydrocarbon binding protein conserved
AO353_07710 -2.9 -13.6 DgcA Dimethylglycine demethylase subunit A (from data) conserved
AO353_07655 -2.8 -10.6 sarcosine oxidase subunit delta conserved
AO353_07755 -2.7 -7.6 betainyl-CoA thiolase (EC 3.1.2.-) (from data) conserved
AO353_07720 -2.4 -7.9 peptidase M19 conserved
AO353_07665 -2.3 -8.6 Serine hydroxymethyltransferase (EC 2.1.2.1) (from data) conserved
AO353_07790 -2.1 -6.2 ABC transporter for Carnitine, ATPase component (from data) conserved
AO353_07735 -1.8 -5.6 AraC family transcriptional regulator conserved
AO353_07785 -1.5 -6.4 ABC transporter for Carnitine, permease component (from data) conserved
AO353_02895 -1.0 -6.5 MFS transporter compare


Specific phenotypes for nitrogen source Carnitine Hydrochloride across organisms