Experiment set5IT027 for Pseudomonas fluorescens FW300-N1B4

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Minimal media pH9

Genes with specific phenotypes:

  gene name fitness t score description  
Pf1N1B4_630 -4.5 -6.2 TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain compare
Pf1N1B4_596 -4.0 -5.5 Glucose ABC transport system, periplasmic sugar-binding protein compare
Pf1N1B4_3696 -3.7 -15.5 FIG00955360: hypothetical protein compare
Pf1N1B4_5824 -3.4 -5.8 Na(+) H(+) antiporter subunit D compare
Pf1N1B4_5822 -3.2 -7.2 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B compare
Pf1N1B4_2718 -2.9 -8.1 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) compare
Pf1N1B4_621 -2.5 -9.6 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) compare
Pf1N1B4_1447 -2.1 -10.0 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) compare
Pf1N1B4_2143 -1.5 -6.1 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system compare
Pf1N1B4_1144 -1.4 -6.2 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) compare
Pf1N1B4_1733 -1.3 -5.9 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) compare
Pf1N1B4_2957 -1.3 -5.8 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) compare
Pf1N1B4_3496 +1.1 6.5 Cytochrome c-type biogenesis protein ResA compare
Pf1N1B4_3431 +1.1 6.5 ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) compare
Pf1N1B4_5636 +1.2 6.8 Histidine kinase/response regulator hybrid protein compare
Pf1N1B4_1306 +1.2 10.6 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) compare
Pf1N1B4_3482 +1.3 8.6 outer membrane protein H1 compare
Pf1N1B4_3433 +1.3 8.6 ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data) compare
Pf1N1B4_2934 +1.3 9.3 Uracil phosphoribosyltransferase (EC 2.4.2.9) compare
Pf1N1B4_2714 +1.4 5.9 FOG: TPR repeat, SEL1 subfamily compare
Pf1N1B4_3437 +1.6 8.5 Arginine pathway regulatory protein ArgR, repressor of arg regulon compare
Pf1N1B4_4858 +1.6 6.4 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY compare
Pf1N1B4_3440 +1.7 11.2 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
Pf1N1B4_2637 +1.9 9.5 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) compare
Pf1N1B4_1337 +1.9 11.9 Outer membrane receptor proteins, mostly Fe transport compare