Experiment set5IT027 for Methanococcus maripaludis S2

Compare to:

Formate McCas no stress control 1

200 most important genes:

  gene name fitness t score description  
MMP_RS06700 -4.0 -20.9 hypothetical protein compare
MMP_RS01175 -3.5 -9.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01020 -3.4 -2.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06355 -3.4 -6.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03475 -3.4 -1.4 hypothetical protein compare
MMP_RS06685 -3.2 -17.5 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS06680 -3.2 -21.1 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS05515 -3.0 -13.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05920 -3.0 -1.8 50S ribosomal protein L37e compare
MMP_RS07635 -2.9 -9.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS05550 -2.8 -1.9 cation:proton antiporter compare
MMP_RS06345 -2.8 -17.9 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS08820 -2.7 -7.5 hypothetical protein compare
MMP_RS03015 -2.7 -14.3 GTP 3' 8-cyclase MoaA compare
MMP_RS06350 -2.6 -10.9 HesA/MoeB/ThiF family protein compare
MMP_RS06715 -2.5 -18.9 cache domain-containing protein compare
MMP_RS06720 -2.5 -11.4 response regulator transcription factor compare
MMP_RS03600 -2.5 -3.4 triose-phosphate isomerase compare
MMP_RS02010 -2.5 -10.7 PHP domain-containing protein compare
MMP_RS08720 -2.5 -3.8 4Fe-4S binding protein compare
MMP_RS01005 -2.4 -2.3 riboflavin synthase compare
MMP_RS01265 -2.3 -3.9 hypothetical protein compare
MMP_RS07845 -2.2 -5.9 LL-diaminopimelate aminotransferase compare
MMP_RS00895 -2.2 -6.4 hypothetical protein compare
MMP_RS01755 -2.1 -2.6 DUF2097 domain-containing protein compare
MMP_RS07600 -2.1 -5.0 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01500 -2.1 -4.8 CBS domain-containing protein compare
MMP_RS07445 -2.0 -6.9 helix-turn-helix domain-containing protein compare
MMP_RS07575 -2.0 -8.2 RNA ligase partner protein compare
MMP_RS06705 -2.0 -7.6 formate/nitrite transporter family protein compare
MMP_RS05555 -2.0 -2.3 DUF4040 domain-containing protein compare
MMP_RS03315 -2.0 -1.4 ferrous iron transport protein A compare
MMP_RS03025 -2.0 -9.3 molybdenum cofactor guanylyltransferase compare
MMP_RS06400 -2.0 -3.8 4Fe-4S binding protein compare
MMP_RS04780 -1.9 -5.0 ribonuclease P compare
MMP_RS06295 -1.9 -10.2 methanogenesis marker 14 protein compare
MMP_RS02800 -1.9 -7.3 nucleotidyltransferase domain-containing protein compare
MMP_RS08745 -1.9 -8.8 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00115 -1.9 -16.0 radical SAM protein compare
MMP_RS02195 -1.9 -7.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02355 -1.9 -5.3 30S ribosomal protein S27ae compare
MMP_RS00295 -1.8 -5.2 gamma carbonic anhydrase family protein compare
MMP_RS02280 -1.8 -2.1 DUF211 domain-containing protein compare
MMP_RS08210 -1.8 -3.3 phosphatidylglycerophosphatase A compare
MMP_RS00300 -1.8 -1.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS02240 -1.8 -4.5 methanogenesis marker 7 protein compare
MMP_RS08460 -1.8 -3.6 proteasome-activating nucleotidase compare
MMP_RS04775 -1.8 -4.4 adenosylhomocysteinase compare
MMP_RS04890 -1.8 -1.4 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS04685 -1.8 -6.1 DUF126 domain-containing protein compare
MMP_RS05875 -1.7 -7.0 hydroxyethylthiazole kinase compare
MMP_RS08635 -1.7 -3.5 UbiA family prenyltransferase compare
MMP_RS06625 -1.6 -3.6 DNA primase compare
MMP_RS00110 -1.6 -5.6 hypothetical protein compare
MMP_RS07525 -1.6 -8.0 4Fe-4S binding protein compare
MMP_RS06285 -1.6 -3.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00685 -1.6 -5.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07735 -1.6 -1.5 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01220 -1.6 -7.1 hypothetical protein compare
MMP_RS07730 -1.5 -3.3 pyruvate synthase subunit beta compare
MMP_RS06340 -1.5 -7.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06270 -1.5 -7.6 TIGR00300 family protein compare
MMP_RS04585 -1.5 -7.7 AIR synthase related protein compare
MMP_RS08300 -1.5 -2.0 metal-sulfur cluster assembly factor compare
MMP_RS06020 -1.4 -5.8 archaeoflavoprotein AfpA compare
MMP_RS06315 -1.4 -1.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00695 -1.4 -1.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS08320 -1.4 -9.4 molybdopterin molybdotransferase MoeA compare
MMP_RS05815 -1.4 -2.3 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS00515 -1.3 -1.6 DUF655 domain-containing protein compare
MMP_RS05540 -1.3 -3.7 hypothetical protein compare
MMP_RS09020 -1.3 -2.8 hypothetical protein compare
MMP_RS01795 -1.3 -2.3 methanogenesis marker 6 protein compare
MMP_RS07765 -1.3 -7.5 sodium:alanine symporter family protein compare
MMP_RS08645 -1.3 -7.5 UPF0179 family protein compare
MMP_RS01610 -1.3 -4.5 hypothetical protein compare
MMP_RS01225 -1.3 -7.1 DUF5379 domain-containing protein compare
MMP_RS02875 -1.3 -7.7 chorismate pyruvate-lyase family protein compare
MMP_RS03960 -1.2 -1.3 hypothetical protein compare
MMP_RS03400 -1.2 -3.9 archease compare
MMP_RS07545 -1.2 -1.7 HTH domain-containing protein compare
MMP_RS02235 -1.2 -9.1 CBS domain-containing protein compare
MMP_RS03640 -1.1 -3.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06475 -1.1 -5.0 FAD-dependent oxidoreductase compare
MMP_RS06730 -1.1 -2.4 phosphopantothenate/pantothenate synthetase compare
MMP_RS05245 -1.1 -7.8 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS06120 -1.1 -2.7 UPF0147 family protein compare
MMP_RS03445 -1.1 -1.6 methanogenesis marker 17 protein compare
MMP_RS01250 -1.1 -4.6 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS02135 -1.1 -3.6 DUF5612 domain-containing protein compare
MMP_RS07755 -1.0 -1.9 DUF555 domain-containing protein compare
MMP_RS01800 -1.0 -4.0 TIGR00303 family protein compare
MMP_RS08790 -1.0 -2.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS01325 -1.0 -2.1 dihydroneopterin aldolase family protein compare
MMP_RS04615 -1.0 -4.5 PDGLE domain-containing protein compare
MMP_RS02245 -1.0 -4.7 hypothetical protein compare
MMP_RS06105 -1.0 -5.9 hydrogenase maturation peptidase HycI compare
MMP_RS07350 -1.0 -2.8 preprotein translocase subunit Sec61beta compare
MMP_RS02165 -1.0 -4.9 tRNA-dihydrouridine synthase compare
MMP_RS06895 -1.0 -2.0 selenocysteine-specific translation elongation factor compare
MMP_RS02345 -1.0 -3.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00320 -1.0 -2.7 class I SAM-dependent methyltransferase compare
MMP_RS08650 -1.0 -2.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS04605 -1.0 -4.7 cobalt ECF transporter T component CbiQ compare
MMP_RS06925 -1.0 -2.3 ribonuclease VapC4 compare
MMP_RS08200 -1.0 -7.8 archaeosine synthase subunit alpha compare
MMP_RS06230 -1.0 -2.3 helix-turn-helix domain-containing protein compare
MMP_RS07380 -1.0 -2.6 transcription elongation factor Spt5 compare
MMP_RS00060 -1.0 -2.1 3-dehydroquinate synthase II compare
MMP_RS03435 -1.0 -2.6 ketol-acid reductoisomerase compare
MMP_RS02190 -0.9 -2.0 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS07750 -0.9 -3.7 DUF357 domain-containing protein compare
MMP_RS03035 -0.9 -3.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS00290 -0.9 -4.2 hypothetical protein compare
MMP_RS01385 -0.9 -0.9 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08725 -0.9 -2.7 Ni/Fe hydrogenase subunit alpha compare
MMP_RS01980 -0.9 -7.4 trimeric intracellular cation channel family protein compare
MMP_RS06175 -0.9 -5.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS04850 -0.9 -7.5 UPF0254 family protein compare
MMP_RS07630 -0.9 -1.5 ATP-binding cassette domain-containing protein compare
MMP_RS07700 -0.9 -5.5 DUF1188 domain-containing protein compare
MMP_RS05265 -0.9 -1.9 2-isopropylmalate synthase compare
MMP_RS00730 -0.9 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01720 -0.9 -1.2 replication factor C large subunit compare
MMP_RS07555 -0.8 -1.0 monovalent cation/H+ antiporter subunit E compare
MMP_RS02885 -0.8 -6.9 molybdopterin biosynthesis protein compare
MMP_RS07005 -0.8 -0.7 4Fe-4S binding protein compare
MMP_RS03155 -0.8 -5.9 precorrin-6A reductase compare
MMP_RS06200 -0.8 -6.1 M24 family metallopeptidase compare
MMP_RS01890 -0.8 -3.2 nucleotide sugar dehydrogenase compare
MMP_RS07200 -0.8 -3.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06865 -0.8 -1.8 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS05345 -0.8 -3.9 hypothetical protein compare
MMP_RS05445 -0.8 -5.2 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS07435 -0.8 -2.4 GMP synthase subunit A compare
MMP_RS03580 -0.8 -2.6 signal recognition particle-docking protein FtsY compare
MMP_RS07535 -0.8 -5.7 4Fe-4S binding protein compare
MMP_RS06395 -0.8 -3.6 ThiF family adenylyltransferase compare
MMP_RS08915 -0.8 -1.9 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS05430 -0.8 -4.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS08715 -0.8 -2.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03555 -0.8 -4.8 transcriptional regulator compare
MMP_RS01335 -0.8 -3.0 prefoldin subunit beta compare
MMP_RS00315 -0.8 -4.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00305 -0.8 -1.0 phosphoribosyl-ATP diphosphatase compare
MMP_RS04870 -0.8 -3.0 TIGR02253 family HAD-type hydrolase compare
MMP_RS06370 -0.7 -3.5 biotin synthase BioB compare
MMP_RS01240 -0.7 -1.1 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS01365 -0.7 -3.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS02145 -0.7 -3.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS05510 -0.7 -4.3 Rrf2 family transcriptional regulator compare
MMP_RS06215 -0.7 -3.1 30S ribosomal protein S6e compare
MMP_RS06885 -0.7 -2.5 50S ribosome-binding GTPase compare
MMP_RS08330 -0.7 -4.3 NADH-quinone oxidoreductase subunit H compare
MMP_RS05545 -0.7 -2.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07580 -0.7 -1.6 DUF356 domain-containing protein compare
MMP_RS07605 -0.7 -2.0 diadenylate cyclase compare
MMP_RS03470 -0.7 -5.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS05060 -0.7 -5.4 AAA family ATPase compare
MMP_RS00120 -0.7 -4.5 LysR family transcriptional regulator compare
MMP_RS04875 -0.7 -3.4 energy-converting hydrogenase B subunit P compare
MMP_RS01180 -0.7 -0.9 XTP/dITP diphosphatase compare
MMP_RS00620 -0.7 -4.9 4Fe-4S binding protein compare
MMP_RS01985 -0.7 -3.0 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS04710 -0.7 -1.7 hypothetical protein compare
MMP_RS07695 -0.7 -3.9 DUF3236 domain-containing protein compare
MMP_RS06975 -0.7 -1.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS00735 -0.7 -2.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS01030 -0.7 -1.4 MTAP family purine nucleoside phosphorylase compare
MMP_RS01780 -0.6 -3.8 TrmJ/YjtD family RNA methyltransferase compare
MMP_RS05450 -0.6 -3.7 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS02340 -0.6 -1.0 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05925 -0.6 -2.9 small nuclear ribonucleoprotein compare
MMP_RS00050 -0.6 -3.5 AarF/UbiB family protein compare
MMP_RS05765 -0.6 -3.4 M42 family metallopeptidase compare
MMP_RS00810 -0.6 -3.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS05100 -0.6 -5.5 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS07530 -0.6 -4.3 4Fe-4S binding protein compare
MMP_RS07365 -0.6 -4.8 2-phosphoglycerate kinase compare
MMP_RS05440 -0.6 -4.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS05095 -0.6 -4.2 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS08095 -0.6 -3.3 dethiobiotin synthase compare
MMP_RS08070 -0.6 -3.6 DUF2096 domain-containing protein compare
MMP_RS04500 -0.6 -4.9 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS02265 -0.6 -3.0 nitroreductase family protein compare
MMP_RS04620 -0.6 -4.5 cobalt transporter CbiM compare
MMP_RS07685 -0.6 -3.9 TIGR01212 family radical SAM protein compare
MMP_RS05850 -0.6 -2.5 Ldh family oxidoreductase compare
MMP_RS05070 -0.6 -3.1 4Fe-4S dicluster domain-containing protein compare
MMP_RS00720 -0.6 -4.0 metal-dependent hydrolase compare
MMP_RS07425 -0.6 -3.2 GTP-binding protein compare
MMP_RS03095 -0.6 -3.8 diphthine synthase compare
MMP_RS08100 -0.6 -3.9 8-amino-7-oxononanoate synthase compare
MMP_RS05065 -0.6 -2.3 CooT family nickel-binding protein compare
MMP_RS06860 -0.6 -1.8 4Fe-4S binding protein compare
MMP_RS00725 -0.5 -2.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08370 -0.5 -0.6 cation:proton antiporter subunit C compare
MMP_RS05425 -0.5 -3.0 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS06525 -0.5 -1.2 YciI family protein compare
MMP_RS07775 -0.5 -3.6 alanine dehydrogenase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments