Experiment set5IT025 for Pseudomonas fluorescens FW300-N2E3

Compare to:

Gly-Glu nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_07220 -4.5 -4.4 anthranilate synthase compare
AO353_12365 -4.3 -2.9 phosphoribosyl-AMP cyclohydrolase compare
AO353_05115 -4.3 -8.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_01375 -4.2 -8.1 phosphate acyltransferase compare
AO353_20695 -4.1 -6.3 O-succinylhomoserine sulfhydrylase compare
AO353_12085 -4.1 -6.3 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_22945 -4.1 -12.0 glycogen branching protein compare
AO353_12070 -4.0 -7.2 imidazoleglycerol-phosphate dehydratase compare
AO353_12515 -4.0 -18.0 glutamate synthase compare
AO353_20625 -4.0 -3.9 3-isopropylmalate dehydratase compare
AO353_12520 -4.0 -10.0 glutamate synthase compare
AO353_05405 -3.9 -9.1 peptide ABC transporter ATP-binding protein conserved
AO353_07230 -3.9 -14.0 anthranilate synthase compare
AO353_00310 -3.9 -8.3 transaldolase compare
AO353_20635 -3.9 -12.2 3-isopropylmalate dehydrogenase compare
AO353_24130 -3.9 -4.6 hypothetical protein compare
AO353_13165 -3.8 -5.2 ATP phosphoribosyltransferase regulatory subunit compare
AO353_14505 -3.8 -11.2 ketol-acid reductoisomerase compare
AO353_20665 -3.8 -10.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_05110 -3.6 -10.2 histidinol dehydrogenase compare
AO353_07215 -3.6 -6.5 anthranilate phosphoribosyltransferase compare
AO353_08475 -3.6 -8.6 phosphoserine phosphatase compare
AO353_08180 -3.5 -11.3 homoserine O-acetyltransferase compare
AO353_20540 -3.5 -7.7 aromatic amino acid aminotransferase compare
AO353_02710 -3.4 -10.5 (p)ppGpp synthetase compare
AO353_08185 -3.4 -9.6 methionine biosynthesis protein MetW compare
AO353_07210 -3.4 -5.2 indole-3-glycerol-phosphate synthase compare
AO353_20620 -3.4 -7.8 isopropylmalate isomerase compare
AO353_12075 -3.3 -7.4 imidazole glycerol phosphate synthase subunit HisH compare
AO353_16450 -3.3 -12.5 protein-PII uridylyltransferase compare
AO353_08345 -3.2 -8.1 dihydroxy-acid dehydratase compare
AO353_12500 -3.1 -2.1 shikimate kinase compare
AO353_14495 -3.1 -10.4 acetolactate synthase 3 catalytic subunit compare
AO353_20175 -3.1 -3.0 ATP-dependent Clp protease proteolytic subunit compare
AO353_14370 -3.1 -6.8 glucose-6-phosphate isomerase compare
AO353_12360 -3.1 -8.2 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_14500 -3.0 -6.2 acetolactate synthase 3 regulatory subunit compare
AO353_05375 -3.0 -14.0 peptide ABC transporter substrate-binding protein conserved
AO353_01080 -2.9 -10.8 hypothetical protein compare
AO353_22500 -2.9 -3.4 hypothetical protein compare
AO353_08685 -2.9 -7.0 N-acetylglutamate synthase compare
AO353_10670 -2.9 -7.4 shikimate dehydrogenase compare
AO353_07515 -2.8 -2.7 transporter compare
AO353_10710 -2.8 -5.0 tryptophan synthase subunit beta compare
AO353_08015 -2.8 -6.6 5,10-methylenetetrahydrofolate reductase compare
AO353_07155 -2.8 -6.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_05410 -2.7 -12.7 peptide ABC transporter ATP-binding protein conserved
AO353_03510 -2.7 -4.5 glycine cleavage system protein T compare
AO353_12115 -2.7 -2.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_04155 -2.7 -11.7 ornithine carbamoyltransferase compare
AO353_05400 -2.7 -7.2 peptide transporter conserved
AO353_04105 -2.7 -8.2 argininosuccinate synthase compare
AO353_02070 -2.7 -7.6 prephenate dehydratase compare
AO353_14400 -2.7 -4.4 Fis family transcriptional regulator compare
AO353_12145 -2.6 -5.0 nitrogen regulation protein NR(I) compare
AO353_05395 -2.6 -8.2 peptide ABC transporter permease conserved
AO353_21625 -2.6 -3.3 Fe/S biogenesis protein NfuA compare
AO353_13160 -2.5 -3.0 membrane protease HflC compare
AO353_07525 -2.5 -12.5 biotin synthase compare
AO353_16940 -2.5 -5.3 deoxycytidine triphosphate deaminase compare
AO353_09240 -2.5 -2.4 acetylglutamate kinase compare
AO353_03035 -2.5 -5.3 AraC family transcriptional regulator compare
AO353_20095 -2.5 -5.3 histidine kinase compare
AO353_12420 -2.5 -2.9 predicted FeS cluster maintenance protein (from data) compare
AO353_00825 -2.5 -3.7 porin compare
AO353_12150 -2.4 -6.0 histidine kinase compare
AO353_08780 -2.4 -7.4 5-formyltetrahydrofolate cyclo-ligase compare
AO353_13070 -2.4 -8.1 phosphoserine phosphatase compare
AO353_14115 -2.4 -7.3 gamma-glutamyl kinase compare
AO353_03500 -2.4 -11.3 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) conserved
AO353_03590 -2.3 -4.2 crossover junction endodeoxyribonuclease RuvC compare
AO353_05105 -2.3 -9.7 histidinol-phosphate aminotransferase compare
AO353_06495 -2.3 -5.4 gamma-glutamyl phosphate reductase compare
AO353_06040 -2.3 -3.8 exodeoxyribonuclease V subunit alpha compare
AO353_03580 -2.3 -4.1 ATP-dependent DNA helicase RuvB compare
AO353_09000 -2.3 -5.0 argininosuccinate lyase compare
AO353_19360 -2.2 -3.0 peroxiredoxin compare
AO353_03360 -2.2 -7.8 glucose-6-phosphate dehydrogenase compare
AO353_02300 -2.2 -2.4 MarR family transcriptional regulator compare
AO353_15925 -2.2 -8.4 2-isopropylmalate synthase compare
AO353_10030 -2.1 -10.1 pyruvate carboxylase subunit A compare
AO353_23385 -2.1 -6.7 trans-2-enoyl-CoA reductase compare
AO353_27650 -2.0 -5.0 cell division protein FtsK compare
AO353_14420 -2.0 -4.6 molecular chaperone DnaK compare
AO353_08465 -2.0 -11.8 phosphoenolpyruvate-protein phosphotransferase compare
AO353_22800 -2.0 -3.2 sulfite reductase compare
AO353_12015 -2.0 -3.0 antitoxin compare
AO353_10705 -2.0 -4.0 tryptophan synthase subunit alpha compare
AO353_00460 -2.0 -3.5 TetR family transcriptional regulator compare
AO353_20185 -1.9 -6.2 DNA-binding protein compare
AO353_08165 -1.9 -3.2 pyrroline-5-carboxylate reductase compare
AO353_00650 -1.9 -2.9 cytochrome biogenesis protein compare
AO353_15295 -1.9 -5.3 division/cell wall cluster transcriptional repressor MraZ compare
AO353_19530 -1.8 -2.3 quinohemoprotein amine dehydrogenase compare
AO353_07290 -1.8 -7.2 mannose-1-phosphate guanylyltransferase compare
AO353_04220 -1.8 -5.1 chemotaxis protein CheY compare
AO353_10025 -1.8 -10.6 pyruvate carboxylase subunit B compare
AO353_10035 -1.8 -7.2 LysR family transcriptional regulator compare
AO353_02685 -1.8 -3.8 phosphoribosylglycinamide formyltransferase compare
AO353_19090 -1.8 -2.3 MarR family transcriptional regulator compare
AO353_01035 -1.7 -3.0 hypothetical protein compare
AO353_00260 -1.7 -2.8 hypothetical protein compare
AO353_06045 -1.7 -6.5 exodeoxyribonuclease V subunit beta compare
AO353_18540 -1.7 -2.7 pseudouridine synthase compare
AO353_05690 -1.7 -3.5 SsrA-binding protein compare
AO353_02000 -1.6 -3.4 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_18010 -1.6 -8.0 hypothetical protein compare
AO353_18015 -1.6 -7.1 AAA family ATPase compare
AO353_03630 -1.6 -9.9 porin compare
AO353_05010 -1.6 -2.6 HopJ type III effector protein compare
AO353_02250 -1.6 -3.1 chorismate synthase compare
AO353_16440 -1.6 -3.1 ArsC family transcriptional regulator compare
AO353_04365 -1.6 -4.6 recombinase XerD compare
AO353_07510 -1.6 -7.4 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_13140 -1.5 -4.8 tRNA dimethylallyltransferase compare
AO353_08115 -1.5 -5.1 energy transducer TonB compare
AO353_13290 -1.5 -5.1 transglutaminase compare
AO353_15250 -1.5 -3.6 cytochrome B compare
AO353_22935 -1.5 -8.3 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase conserved
AO353_08045 -1.5 -9.8 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_26885 -1.5 -6.3 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) compare
AO353_01355 -1.5 -6.5 3-oxoacyl-ACP synthase compare
AO353_28425 -1.5 -3.4 TetR family transcriptional regulator compare
AO353_00750 -1.5 -3.5 GntR family transcriptional regulator compare
AO353_03775 -1.5 -6.6 pyruvate kinase compare
AO353_07355 -1.5 -5.0 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_08885 -1.4 -9.9 polyphosphate kinase compare
AO353_11850 -1.4 -3.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_00620 -1.4 -2.3 cytochrome C oxidase Cbb3 compare
AO353_03495 -1.4 -4.3 glycine cleavage system protein H compare
AO353_01780 -1.4 -8.0 heat-shock protein Hsp90 compare
AO353_14930 -1.4 -2.6 GntR family transcriptional regulator compare
AO353_07505 -1.4 -6.3 dethiobiotin synthetase compare
AO353_02005 -1.4 -1.3 hypothetical protein compare
AO353_01350 -1.4 -5.0 4-amino-4-deoxychorismate lyase compare
AO353_10430 -1.4 -2.5 chromosome partitioning protein ParB compare
AO353_12390 -1.4 -3.2 poly(3-hydroxyalkanoate) granule-associated protein PhaI compare
AO353_01550 -1.4 -4.0 hypothetical protein compare
AO353_12240 -1.4 -4.3 histidine utilization repressor compare
AO353_13640 -1.4 -3.6 histidine kinase compare
AO353_20815 -1.4 -3.1 LacI family transcriptional regulator compare
AO353_03605 -1.4 -1.5 FmdB family transcriptional regulator compare
AO353_14405 -1.4 -8.4 ATPase compare
AO353_02600 -1.3 -2.3 alpha-ribazole phosphatase compare
AO353_08470 -1.3 -3.7 RNA pyrophosphohydrolase compare
AO353_10945 -1.3 -2.4 cytochrome C compare
AO353_00105 -1.3 -2.1 hypothetical protein compare
AO353_01190 -1.3 -2.1 hypothetical protein compare
AO353_07520 -1.3 -7.7 8-amino-7-oxononanoate synthase compare
AO353_15185 -1.3 -3.9 ATPase compare
AO353_02630 -1.3 -2.1 5,6-dimethylbenzimidazole synthase compare
AO353_01975 -1.3 -5.8 glycosyl transferase compare
AO353_24255 -1.3 -3.1 hypothetical protein compare
AO353_04600 -1.3 -4.8 glutamine ABC transporter ATP-binding protein compare
AO353_06850 -1.2 -3.6 MFS transporter compare
AO353_12350 -1.2 -1.7 preprotein translocase compare
AO353_12090 -1.2 -1.6 imidazole glycerol phosphate synthase subunit HisF compare
AO353_02075 -1.2 -6.6 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_02975 -1.2 -2.5 aspartate kinase compare
AO353_02100 -1.2 -2.6 phosphoglycolate phosphatase compare
AO353_06050 -1.2 -5.0 exodeoxyribonuclease V subunit gamma compare
AO353_04500 -1.2 -2.2 DNA repair protein RecO compare
AO353_27710 -1.2 -2.1 DNA repair protein compare
AO353_05800 -1.2 -3.9 hypothetical protein compare
AO353_07555 -1.2 -2.1 glycine cleavage system protein R compare
AO353_09030 -1.2 -1.5 iron donor protein CyaY compare
AO353_03420 -1.2 -3.5 phosphogluconate dehydratase compare
AO353_15260 -1.2 -4.0 stringent starvation protein A compare
AO353_17640 -1.2 -2.2 serine peptidase compare
AO353_08880 -1.2 -1.9 exopolyphosphatase compare
AO353_12345 -1.2 -1.7 twin-arginine protein translocation system subunit TatC compare
AO353_28055 -1.2 -2.2 hypothetical protein compare
AO353_13360 -1.2 -3.7 ABC transporter ATP-binding protein compare
AO353_04355 -1.2 -1.9 homoserine dehydrogenase compare
AO353_08100 -1.2 -2.6 chemotaxis protein CheY compare
AO353_20785 -1.1 -3.6 carbon storage regulator CsrA compare
AO353_23945 -1.1 -1.6 hypothetical protein compare
AO353_14775 -1.1 -4.4 hypothetical protein compare
AO353_10730 -1.1 -1.1 hypothetical protein compare
AO353_13155 -1.1 -2.6 hypothetical protein compare
AO353_13345 -1.1 -7.6 branched-chain amino acid transporter permease subunit LivH conserved
AO353_25835 -1.1 -3.1 6-phosphogluconate dehydrogenase compare
AO353_26520 -1.1 -2.6 TetR family transcriptional regulator compare
AO353_00515 -1.1 -2.7 hypothetical protein compare
AO353_03415 -1.1 -3.6 glucokinase compare
AO353_21940 -1.1 -2.7 protein nirG compare
AO353_00890 -1.1 -3.9 Fe/S-dependent 2-methylisocitrate dehydratase AcnD compare
AO353_09560 -1.1 -1.7 type VI secretion protein compare
AO353_21630 -1.1 -1.7 precorrin-4 C11-methyltransferase compare
AO353_13285 -1.1 -6.2 molybdopterin oxidoreductase compare
AO353_09285 -1.1 -5.9 reactive intermediate/imine deaminase compare
AO353_14595 -1.1 -5.5 carbonate dehydratase compare
AO353_12105 -1.1 -4.3 peptidase S41 compare
AO353_20630 -1.1 -6.3 SAM-dependent methyltransferase compare
AO353_19295 -1.1 -1.7 hypothetical protein compare
AO353_11945 -1.0 -1.2 4-oxalocrotonate tautomerase compare
AO353_03545 -1.0 -4.8 hypothetical protein compare
AO353_19515 -1.0 -2.6 haloacid dehalogenase compare
AO353_11530 -1.0 -4.5 diguanylate cyclase compare
AO353_00170 -1.0 -2.2 lysozyme compare


Specific Phenotypes

For 26 genes in this experiment

For nitrogen source Gly-Glu in Pseudomonas fluorescens FW300-N2E3

For nitrogen source Gly-Glu across organisms