Experiment set5IT025 for Methanococcus maripaludis S2

Compare to:

Formate McCas no stress control 1

200 most important genes:

  gene name fitness t score description  
MMP_RS06700 -4.1 -16.5 hypothetical protein compare
MMP_RS01175 -3.7 -6.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06685 -3.5 -23.1 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS06680 -3.3 -21.1 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06355 -3.3 -4.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05515 -2.8 -14.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS02010 -2.8 -12.8 PHP domain-containing protein compare
MMP_RS03015 -2.8 -12.7 GTP 3' 8-cyclase MoaA compare
MMP_RS07635 -2.7 -12.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06345 -2.6 -14.9 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS08460 -2.6 -5.3 proteasome-activating nucleotidase compare
MMP_RS06715 -2.6 -18.1 cache domain-containing protein compare
MMP_RS01005 -2.6 -3.0 riboflavin synthase compare
MMP_RS02280 -2.6 -2.4 DUF211 domain-containing protein compare
MMP_RS06295 -2.6 -8.8 methanogenesis marker 14 protein compare
MMP_RS08820 -2.5 -11.6 hypothetical protein compare
MMP_RS06720 -2.5 -13.5 response regulator transcription factor compare
MMP_RS08635 -2.5 -2.9 UbiA family prenyltransferase compare
MMP_RS07845 -2.5 -4.4 LL-diaminopimelate aminotransferase compare
MMP_RS03315 -2.5 -2.0 ferrous iron transport protein A compare
MMP_RS07735 -2.3 -2.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01500 -2.3 -4.5 CBS domain-containing protein compare
MMP_RS07005 -2.3 -1.3 4Fe-4S binding protein compare
MMP_RS06350 -2.2 -11.8 HesA/MoeB/ThiF family protein compare
MMP_RS00515 -2.2 -2.0 DUF655 domain-containing protein compare
MMP_RS05920 -2.2 -1.7 50S ribosomal protein L37e compare
MMP_RS01020 -2.2 -2.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06705 -2.2 -8.9 formate/nitrite transporter family protein compare
MMP_RS01265 -2.1 -3.7 hypothetical protein compare
MMP_RS07445 -2.1 -7.2 helix-turn-helix domain-containing protein compare
MMP_RS02195 -2.0 -5.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03035 -2.0 -5.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05875 -2.0 -5.2 hydroxyethylthiazole kinase compare
MMP_RS07575 -2.0 -9.0 RNA ligase partner protein compare
MMP_RS04780 -2.0 -5.6 ribonuclease P compare
MMP_RS08300 -2.0 -2.6 metal-sulfur cluster assembly factor compare
MMP_RS06625 -1.9 -3.2 DNA primase compare
MMP_RS06400 -1.9 -3.3 4Fe-4S binding protein compare
MMP_RS04685 -1.9 -4.7 DUF126 domain-containing protein compare
MMP_RS01755 -1.9 -3.0 DUF2097 domain-containing protein compare
MMP_RS03025 -1.9 -7.1 molybdenum cofactor guanylyltransferase compare
MMP_RS07525 -1.9 -10.3 4Fe-4S binding protein compare
MMP_RS00895 -1.8 -5.7 hypothetical protein compare
MMP_RS02800 -1.7 -6.4 nucleotidyltransferase domain-containing protein compare
MMP_RS00115 -1.7 -10.2 radical SAM protein compare
MMP_RS00300 -1.7 -1.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03435 -1.7 -3.7 ketol-acid reductoisomerase compare
MMP_RS06270 -1.7 -6.9 TIGR00300 family protein compare
MMP_RS04775 -1.7 -5.6 adenosylhomocysteinase compare
MMP_RS01220 -1.7 -7.5 hypothetical protein compare
MMP_RS06475 -1.6 -7.3 FAD-dependent oxidoreductase compare
MMP_RS08210 -1.6 -3.6 phosphatidylglycerophosphatase A compare
MMP_RS00110 -1.6 -4.1 hypothetical protein compare
MMP_RS08645 -1.6 -7.5 UPF0179 family protein compare
MMP_RS05555 -1.5 -2.6 DUF4040 domain-containing protein compare
MMP_RS05540 -1.5 -4.4 hypothetical protein compare
MMP_RS07630 -1.5 -2.6 ATP-binding cassette domain-containing protein compare
MMP_RS03475 -1.5 -1.1 hypothetical protein compare
MMP_RS06285 -1.5 -3.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS02355 -1.5 -5.4 30S ribosomal protein S27ae compare
MMP_RS04585 -1.5 -8.0 AIR synthase related protein compare
MMP_RS03640 -1.5 -5.1 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02135 -1.4 -5.1 DUF5612 domain-containing protein compare
MMP_RS06925 -1.4 -3.0 ribonuclease VapC4 compare
MMP_RS08720 -1.4 -2.1 4Fe-4S binding protein compare
MMP_RS01225 -1.4 -5.9 DUF5379 domain-containing protein compare
MMP_RS08745 -1.4 -7.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08790 -1.4 -3.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS05550 -1.4 -1.4 cation:proton antiporter compare
MMP_RS08715 -1.4 -1.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06120 -1.3 -2.9 UPF0147 family protein compare
MMP_RS02240 -1.3 -4.9 methanogenesis marker 7 protein compare
MMP_RS00695 -1.3 -1.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS00295 -1.3 -4.2 gamma carbonic anhydrase family protein compare
MMP_RS04890 -1.3 -1.4 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01610 -1.3 -4.6 hypothetical protein compare
MMP_RS06340 -1.3 -9.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08650 -1.2 -4.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07765 -1.2 -6.8 sodium:alanine symporter family protein compare
MMP_RS01800 -1.2 -4.6 TIGR00303 family protein compare
MMP_RS07380 -1.2 -2.2 transcription elongation factor Spt5 compare
MMP_RS01365 -1.2 -5.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00685 -1.2 -4.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS09020 -1.1 -1.7 hypothetical protein compare
MMP_RS02190 -1.1 -3.1 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS02875 -1.1 -7.4 chorismate pyruvate-lyase family protein compare
MMP_RS07730 -1.1 -2.7 pyruvate synthase subunit beta compare
MMP_RS06865 -1.1 -1.9 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS03580 -1.1 -3.5 signal recognition particle-docking protein FtsY compare
MMP_RS02345 -1.1 -3.3 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01250 -1.1 -5.3 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS05510 -1.1 -6.2 Rrf2 family transcriptional regulator compare
MMP_RS07600 -1.0 -3.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06730 -1.0 -1.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS06630 -1.0 -1.4 UPF0058 family protein compare
MMP_RS00320 -1.0 -2.2 class I SAM-dependent methyltransferase compare
MMP_RS08320 -1.0 -4.9 molybdopterin molybdotransferase MoeA compare
MMP_RS00315 -1.0 -6.4 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS02340 -1.0 -1.3 DNA-directed RNA polymerase subunit E'' compare
MMP_RS02165 -1.0 -5.8 tRNA-dihydrouridine synthase compare
MMP_RS06020 -1.0 -3.8 archaeoflavoprotein AfpA compare
MMP_RS00290 -1.0 -3.6 hypothetical protein compare
MMP_RS01700 -1.0 -1.2 dihydroxy-acid dehydratase compare
MMP_RS02235 -1.0 -7.3 CBS domain-containing protein compare
MMP_RS05815 -0.9 -2.6 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS07755 -0.9 -0.9 DUF555 domain-containing protein compare
MMP_RS01980 -0.9 -7.8 trimeric intracellular cation channel family protein compare
MMP_RS04605 -0.9 -3.9 cobalt ECF transporter T component CbiQ compare
MMP_RS06975 -0.9 -2.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01180 -0.9 -1.1 XTP/dITP diphosphatase compare
MMP_RS04870 -0.9 -4.5 TIGR02253 family HAD-type hydrolase compare
MMP_RS05445 -0.9 -5.3 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS05430 -0.9 -4.4 TIGR00288 family NYN domain-containing protein compare
MMP_RS07535 -0.9 -6.1 4Fe-4S binding protein compare
MMP_RS06105 -0.9 -4.9 hydrogenase maturation peptidase HycI compare
MMP_RS07580 -0.9 -2.7 DUF356 domain-containing protein compare
MMP_RS08435 -0.9 -2.4 Era-like GTP-binding protein compare
MMP_RS03960 -0.9 -1.0 hypothetical protein compare
MMP_RS05545 -0.9 -4.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05425 -0.9 -4.2 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS02885 -0.8 -7.2 molybdopterin biosynthesis protein compare
MMP_RS03400 -0.8 -1.9 archease compare
MMP_RS03555 -0.8 -4.7 transcriptional regulator compare
MMP_RS06895 -0.8 -1.3 selenocysteine-specific translation elongation factor compare
MMP_RS05845 -0.8 -1.6 tRNA-intron lyase compare
MMP_RS07750 -0.8 -3.1 DUF357 domain-containing protein compare
MMP_RS04500 -0.8 -7.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01325 -0.8 -2.5 dihydroneopterin aldolase family protein compare
MMP_RS07425 -0.8 -3.6 GTP-binding protein compare
MMP_RS08915 -0.8 -1.8 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS04615 -0.8 -4.7 PDGLE domain-containing protein compare
MMP_RS06930 -0.8 -5.9 MBL fold metallo-hydrolase compare
MMP_RS05765 -0.8 -4.9 M42 family metallopeptidase compare
MMP_RS07200 -0.8 -3.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00620 -0.8 -5.0 4Fe-4S binding protein compare
MMP_RS00050 -0.8 -4.2 AarF/UbiB family protein compare
MMP_RS02245 -0.8 -2.4 hypothetical protein compare
MMP_RS03155 -0.8 -4.1 precorrin-6A reductase compare
MMP_RS02145 -0.8 -3.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS08165 -0.8 -1.2 phosphoglycerate dehydrogenase compare
MMP_RS06315 -0.7 -1.1 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00730 -0.7 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS03600 -0.7 -1.4 triose-phosphate isomerase compare
MMP_RS08200 -0.7 -6.3 archaeosine synthase subunit alpha compare
MMP_RS01385 -0.7 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS05245 -0.7 -5.4 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS05345 -0.7 -4.0 hypothetical protein compare
MMP_RS05315 -0.7 -1.3 hypothetical protein compare
MMP_RS06885 -0.7 -2.1 50S ribosome-binding GTPase compare
MMP_RS06175 -0.7 -3.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS07775 -0.7 -5.2 alanine dehydrogenase compare
MMP_RS07700 -0.7 -4.2 DUF1188 domain-containing protein compare
MMP_RS05265 -0.7 -1.7 2-isopropylmalate synthase compare
MMP_RS00735 -0.7 -2.8 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04850 -0.7 -6.1 UPF0254 family protein compare
MMP_RS07625 -0.7 -2.3 cobalt ECF transporter T component CbiQ compare
MMP_RS00725 -0.7 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07365 -0.7 -5.1 2-phosphoglycerate kinase compare
MMP_RS06200 -0.7 -5.3 M24 family metallopeptidase compare
MMP_RS04090 -0.7 -2.9 hypothetical protein compare
MMP_RS01795 -0.7 -1.7 methanogenesis marker 6 protein compare
MMP_RS02900 -0.7 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS05060 -0.7 -5.6 AAA family ATPase compare
MMP_RS08330 -0.6 -3.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS05925 -0.6 -2.9 small nuclear ribonucleoprotein compare
MMP_RS06215 -0.6 -2.7 30S ribosomal protein S6e compare
MMP_RS00915 -0.6 -3.0 DUF116 domain-containing protein compare
MMP_RS03095 -0.6 -3.3 diphthine synthase compare
MMP_RS07545 -0.6 -0.6 HTH domain-containing protein compare
MMP_RS01195 -0.6 -1.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01985 -0.6 -2.6 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS00985 -0.6 -3.2 CDC48 family AAA ATPase compare
MMP_RS06940 -0.6 -1.7 polyprenyl diphosphate synthase compare
MMP_RS03305 -0.6 -4.1 winged helix-turn-helix domain-containing protein compare
MMP_RS05850 -0.6 -2.7 Ldh family oxidoreductase compare
MMP_RS00810 -0.6 -2.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00720 -0.6 -3.5 metal-dependent hydrolase compare
MMP_RS04620 -0.6 -4.3 cobalt transporter CbiM compare
MMP_RS06525 -0.6 -1.3 YciI family protein compare
MMP_RS01720 -0.6 -0.7 replication factor C large subunit compare
MMP_RS04875 -0.6 -2.9 energy-converting hydrogenase B subunit P compare
MMP_RS08095 -0.6 -3.2 dethiobiotin synthase compare
MMP_RS06370 -0.5 -3.0 biotin synthase BioB compare
MMP_RS07695 -0.5 -2.6 DUF3236 domain-containing protein compare
MMP_RS08100 -0.5 -3.5 8-amino-7-oxononanoate synthase compare
MMP_RS06395 -0.5 -1.7 ThiF family adenylyltransferase compare
MMP_RS08335 -0.5 -2.5 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS05800 -0.5 -3.9 B12-binding domain-containing radical SAM protein compare
MMP_RS00345 -0.5 -3.3 DUF2666 domain-containing protein compare
MMP_RS08240 -0.5 -4.1 methanogenesis marker 16 metalloprotein compare
MMP_RS05080 -0.5 -4.1 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS05100 -0.5 -4.7 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS01665 -0.5 -2.2 DUF2111 domain-containing protein compare
MMP_RS07685 -0.5 -2.8 TIGR01212 family radical SAM protein compare
MMP_RS00120 -0.5 -2.4 LysR family transcriptional regulator compare
MMP_RS05070 -0.5 -3.4 4Fe-4S dicluster domain-containing protein compare
MMP_RS00750 -0.5 -1.5 fumarate hydratase compare
MMP_RS03250 -0.5 -1.5 MJ1244 family protein compare
MMP_RS01030 -0.5 -1.5 MTAP family purine nucleoside phosphorylase compare
MMP_RS07530 -0.5 -3.8 4Fe-4S binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments