Experiment set5IT025 for Klebsiella michiganensis M5al

Compare to:

D-Salicin carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS11440 +1.5 2.6 hypothetical protein compare
BWI76_RS20230 +1.4 2.7 hypothetical protein compare
BWI76_RS19770 +1.3 2.6 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01330 +1.2 3.6 twin-arginine translocase subunit TatC compare
BWI76_RS16795 +1.1 3.7 amino acid ABC transporter ATPase compare
BWI76_RS12040 +1.0 1.7 hypothetical protein compare
BWI76_RS25285 +0.9 1.2 HPr family phosphocarrier protein compare
BWI76_RS01630 +0.9 1.6 16S ribosomal RNA compare
BWI76_RS09450 +0.9 1.6 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS14575 +0.9 2.7 TENA/THI-4 family protein compare
BWI76_RS13325 +0.9 1.9 dicarboxylate transporter/tellurite-resistance protein TehA compare
BWI76_RS20795 +0.9 1.4 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS01995 +0.9 1.3 AraC family transcriptional regulator compare
BWI76_RS04565 +0.9 3.5 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS19935 +0.9 1.8 hypothetical protein compare
BWI76_RS20360 +0.9 1.3 cell division protein DedD compare
BWI76_RS13420 +0.9 2.1 ABC transporter permease compare
BWI76_RS17530 +0.9 2.8 hypothetical protein compare
BWI76_RS19310 +0.9 2.6 ABC transporter permease compare
BWI76_RS06405 +0.8 2.2 2-dehydropantoate 2-reductase compare
BWI76_RS15015 +0.8 1.4 DUF2132 domain-containing protein compare
BWI76_RS03045 +0.8 1.2 hypothetical protein compare
BWI76_RS24945 +0.8 1.2 glutamine amidotransferase compare
BWI76_RS14155 +0.8 1.4 transketolase compare
BWI76_RS17350 +0.8 2.0 DNA-binding response regulator compare
BWI76_RS07475 +0.8 1.0 DNA-binding transcriptional regulator RamA compare
BWI76_RS02655 +0.8 1.8 hypothetical protein compare
BWI76_RS18240 +0.8 1.6 L-arabinose ABC transporter permease AraH compare
BWI76_RS26660 +0.7 2.8 transcription elongation factor GreB compare
BWI76_RS16190 +0.7 1.8 universal stress protein UspE compare
BWI76_RS08275 +0.7 1.4 LexA regulated protein compare
BWI76_RS14170 +0.7 2.4 hypothetical protein compare
BWI76_RS17470 +0.7 1.4 MerR family transcriptional regulator compare
BWI76_RS18650 +0.7 3.2 fimbrial protein compare
BWI76_RS05045 +0.7 1.2 general secretion pathway protein GspM compare
BWI76_RS10060 +0.7 1.3 acylphosphatase compare
BWI76_RS19975 +0.7 2.1 sn-glycerol-3-phosphate dehydrogenase subunit C compare
BWI76_RS08375 +0.7 1.4 pyroglutamyl-peptidase I compare
BWI76_RS16935 +0.7 1.0 shikimate dehydrogenase compare
BWI76_RS02225 +0.7 1.6 phosphonate C-P lyase system protein PhnG compare
BWI76_RS22975 +0.7 1.6 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA compare
BWI76_RS27745 +0.7 2.7 PTS sugar transporter subunit IIB compare
BWI76_RS19865 +0.7 2.0 ecotin compare
BWI76_RS12585 +0.7 2.6 transcriptional regulator compare
BWI76_RS12485 +0.7 1.7 TyrR family transcriptional regulator compare
BWI76_RS11970 +0.7 1.7 stress response translation initiation inhibitor YciH compare
BWI76_RS05645 +0.7 2.3 fructuronate reductase compare
BWI76_RS23745 +0.7 1.6 arsenate reductase compare
BWI76_RS15215 +0.7 0.9 N-acetyltransferase compare
BWI76_RS15435 +0.7 1.4 hypothetical protein compare
BWI76_RS16120 +0.7 1.6 4-carboxymuconolactone decarboxylase compare
BWI76_RS23060 +0.7 3.3 cobalt-precorrin-4 C(11)-methyltransferase compare
BWI76_RS07970 +0.7 1.5 hypothetical protein compare
BWI76_RS17765 +0.6 2.1 hypothetical protein compare
BWI76_RS23055 +0.6 1.4 cobalamin biosynthesis protein CbiG compare
BWI76_RS27200 +0.6 1.3 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS27455 +0.6 1.2 DUF805 domain-containing protein compare
BWI76_RS17970 +0.6 1.0 zinc metalloprotease HtpX compare
BWI76_RS15150 +0.6 1.6 outer membrane efflux protein compare
BWI76_RS22470 +0.6 1.7 transporter permease compare
BWI76_RS17975 +0.6 2.8 tail-specific protease compare
BWI76_RS01545 +0.6 1.6 thiamine biosynthesis protein ThiS compare
BWI76_RS16355 +0.6 1.7 electron transport complex subunit A compare
BWI76_RS07820 +0.6 1.2 S-methyl-5-thioribose kinase compare
BWI76_RS07540 +0.6 2.5 dipeptide ABC transporter ATP-binding protein DppD compare
BWI76_RS07760 +0.6 1.7 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS10475 +0.6 2.0 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS03015 +0.6 1.4 RNase E inhibitor protein compare
BWI76_RS17945 +0.6 1.4 hypothetical protein compare
BWI76_RS18770 +0.6 0.8 DNA gyrase inhibitor compare
BWI76_RS16400 +0.6 2.0 pyridoxal kinase compare
BWI76_RS26575 +0.6 2.4 universal stress protein B compare
BWI76_RS18125 +0.6 1.9 murein DD-endopeptidase MepM compare
BWI76_RS15960 +0.6 2.9 LysR family transcriptional regulator compare
BWI76_RS21245 +0.6 1.7 nitrogen regulatory protein P-II compare
BWI76_RS15345 +0.6 2.3 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS18810 +0.6 1.3 nitrogenase iron protein compare
BWI76_RS21905 +0.6 1.9 class II aldolase compare
BWI76_RS21760 +0.6 1.9 SMP-30/gluconolactonase/LRE family protein compare
BWI76_RS11525 +0.6 0.8 HNH endonuclease compare
BWI76_RS13195 +0.6 1.3 glutamate dehydrogenase compare
BWI76_RS08765 +0.6 1.1 8-amino-7-oxononanoate synthase compare
BWI76_RS17315 +0.6 2.0 EamA family transporter compare
BWI76_RS04700 +0.6 2.0 acetolactate synthase small subunit compare
BWI76_RS13150 +0.6 1.6 carnitine operon protein CaiE compare
BWI76_RS08735 +0.6 2.3 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS15965 +0.6 3.1 MFS transporter compare
BWI76_RS00715 +0.6 1.7 two-component sensor histidine kinase compare
BWI76_RS24720 +0.6 1.9 hypothetical protein compare
BWI76_RS07640 +0.5 1.0 short chain dehydrogenase compare
BWI76_RS10435 +0.5 1.2 suppressor for copper-sensitivity C compare
BWI76_RS20610 +0.5 1.9 LysR family transcriptional regulator compare
BWI76_RS15045 +0.5 1.7 LysR family transcriptional regulator compare
BWI76_RS07830 +0.5 2.2 3-phytase compare
BWI76_RS02875 +0.5 2.4 membrane protein compare
BWI76_RS24810 +0.5 1.1 hypothetical protein compare
BWI76_RS16655 +0.5 2.2 CatA-like O-acetyltransferase compare
BWI76_RS03920 +0.5 2.2 N-acetyltransferase compare
BWI76_RS20940 +0.5 1.8 uracil/xanthine transporter compare
BWI76_RS00725 +0.5 2.0 periplasmic repressor CpxP compare
BWI76_RS23340 +0.5 1.4 transcriptional regulator compare
BWI76_RS18755 +0.5 0.9 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS10450 +0.5 2.8 tRNA-Tyr compare
BWI76_RS18410 +0.5 1.1 drug/metabolite exporter YedA compare
BWI76_RS01000 +0.5 1.3 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS15290 +0.5 0.9 transcriptional regulator compare
BWI76_RS27505 +0.5 1.5 septal ring assembly protein ZapB compare
BWI76_RS06250 +0.5 1.0 alpha-glycosidase compare
BWI76_RS26365 +0.5 1.5 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS13975 +0.5 1.8 urea carboxylase compare
BWI76_RS19195 +0.5 1.8 nickel ABC transporter permease compare
BWI76_RS27630 +0.5 2.0 antibiotic biosynthesis monooxygenase compare
BWI76_RS14770 +0.5 0.9 PTS IIA 2 domain protein compare
BWI76_RS15775 +0.5 1.4 replication protein compare
BWI76_RS26750 +0.5 1.8 PfkB domain-containing protein compare
BWI76_RS18335 +0.5 3.3 DNA-binding response regulator compare
BWI76_RS20720 +0.5 0.6 hypothetical protein compare
BWI76_RS25300 +0.5 1.3 hybrid sensor histidine kinase/response regulator compare
BWI76_RS15940 +0.5 1.4 DMSO reductase maturation protein DsmD compare
BWI76_RS27165 +0.5 1.8 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS04145 +0.5 1.2 purine-nucleoside phosphorylase compare
BWI76_RS17310 +0.5 1.6 AsnC family transcriptional regulator compare
BWI76_RS20155 +0.5 1.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS13805 +0.5 1.9 inorganic diphosphatase compare
BWI76_RS22980 +0.5 2.5 murein transglycosylase A compare
BWI76_RS15930 +0.5 1.2 dimethylsulfoxide reductase, chain B compare
BWI76_RS01725 +0.5 2.4 PTS mannose/fructose/sorbose family transporter subunit IID compare
BWI76_RS24270 +0.5 1.3 membrane protein compare
BWI76_RS07470 +0.5 1.8 MBL fold metallo-hydrolase compare
BWI76_RS01560 +0.5 2.1 Rsd/AlgQ family anti-sigma factor compare
BWI76_RS10510 +0.5 1.2 OHCU decarboxylase compare
BWI76_RS19835 +0.5 1.2 nucleoid-associated protein YejK compare
BWI76_RS15120 +0.5 2.0 hypothetical protein compare
BWI76_RS17190 +0.5 1.4 TonB system transport protein TonB compare
BWI76_RS16270 +0.5 1.8 fumarate hydratase, class II compare
BWI76_RS24470 +0.5 2.3 hypothetical protein compare
BWI76_RS12940 +0.5 1.4 AraC family transcriptional regulator compare
BWI76_RS23375 +0.5 2.3 cupin compare
BWI76_RS10955 +0.5 1.3 hypothetical protein compare
BWI76_RS02860 +0.5 0.9 glycine dehydrogenase compare
BWI76_RS26020 +0.5 1.9 peptidylprolyl isomerase A compare
BWI76_RS20885 +0.5 1.4 tRNA(Met) cytidine acetyltransferase TmcA compare
BWI76_RS09020 +0.5 3.0 6-phospho-beta-glucosidase compare
BWI76_RS20285 +0.5 2.7 glutathione S-transferase compare
BWI76_RS03425 +0.5 2.1 dihydrodipicolinate synthase family protein compare
BWI76_RS15985 +0.5 2.2 LysR family transcriptional regulator compare
BWI76_RS07870 +0.5 2.6 carbohydrate kinase compare
BWI76_RS06680 +0.5 0.7 hypothetical protein compare
BWI76_RS04425 +0.5 1.5 oxaloacetate decarboxylase subunit gamma compare
BWI76_RS24745 +0.5 1.5 membrane protein compare
BWI76_RS21580 +0.5 1.0 SsrA-binding protein compare
BWI76_RS23070 +0.5 1.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS11390 +0.5 1.8 iron dicitrate transport regulator FecR compare
BWI76_RS15260 +0.5 1.0 hypothetical protein compare
BWI76_RS26095 +0.5 0.6 shikimate kinase compare
BWI76_RS05070 +0.5 0.9 type II secretion system protein GspH compare
BWI76_RS03295 +0.5 0.9 transposase compare
BWI76_RS07260 +0.5 1.1 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS25510 +0.5 2.2 oxidoreductase compare
BWI76_RS16115 +0.5 2.1 fumarate hydratase compare
BWI76_RS17820 +0.5 1.7 hypothetical protein compare
BWI76_RS18070 +0.5 1.8 DNA polymerase III subunit epsilon compare
BWI76_RS22070 +0.5 2.4 proline/betaine ABC transporter permease ProW compare
BWI76_RS07775 +0.5 2.2 carbon starvation protein A compare
BWI76_RS26330 +0.5 1.7 ABC transporter ATP-binding protein compare
BWI76_RS21495 +0.5 1.7 outer membrane lipoprotein compare
BWI76_RS01595 +0.5 2.1 zinc resistance protein compare
BWI76_RS06075 +0.5 1.6 taurine transporter subunit compare
BWI76_RS23125 +0.5 0.8 propanediol dehydratase small subunit compare
BWI76_RS09335 +0.4 0.6 baseplate assembly protein W compare
BWI76_RS11680 +0.4 2.4 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS09515 +0.4 1.7 arginine ABC transporter substrate-binding protein compare
BWI76_RS19570 +0.4 1.3 3-hydroxybenzoate 6-hydroxylase compare
BWI76_RS19455 +0.4 2.8 hypothetical protein compare
BWI76_RS14620 +0.4 1.3 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS23120 +0.4 1.1 propanediol dehydratase medium subunit compare
BWI76_RS09280 +0.4 2.0 terminase endonuclease subunit compare
BWI76_RS05040 +0.4 2.1 type II secretion system protein N compare
BWI76_RS22815 +0.4 2.8 hybrid sensor histidine kinase/response regulator compare
BWI76_RS06565 +0.4 2.4 putative periplasmic solute-binding protein compare
BWI76_RS10500 +0.4 1.4 flavoprotein monooxygenase compare
BWI76_RS04895 +0.4 1.3 hypothetical protein compare
BWI76_RS23065 +0.4 1.5 cobalt-precorrin-6Y C(15)-methyltransferase compare
BWI76_RS11870 +0.4 1.7 hypothetical protein compare
BWI76_RS16055 +0.4 1.8 malonate decarboxylase subunit epsilon compare
BWI76_RS13135 +0.4 1.2 3-oxoadipyl-CoA thiolase compare
BWI76_RS10655 +0.4 1.9 [formate-C-acetyltransferase]-activating enzyme compare
BWI76_RS01600 +0.4 2.3 sensor protein ZraS compare
BWI76_RS18870 +0.4 0.8 protein NifZ compare
BWI76_RS23000 +0.4 1.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BWI76_RS08925 +0.4 1.6 DNA-binding protein YbiB compare
BWI76_RS15135 +0.4 1.6 hypothetical protein compare
BWI76_RS07200 +0.4 1.8 MFS transporter compare
BWI76_RS23295 +0.4 2.1 tellurium resistance protein TerC compare
BWI76_RS13170 +0.4 1.3 methyltransferase compare
BWI76_RS22265 +0.4 1.2 NADH:flavorubredoxin oxidoreductase compare
BWI76_RS17085 +0.4 2.0 hypothetical protein compare
BWI76_RS06550 +0.4 2.4 competence protein ComEA compare
BWI76_RS09315 +0.4 0.7 hypothetical protein compare
BWI76_RS04060 +0.4 0.6 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Salicin in Klebsiella michiganensis M5al

For carbon source D-Salicin across organisms