Experiment set5IT024 for Klebsiella michiganensis M5al

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Cytidine carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS01655 -7.7 -7.5 homoserine O-succinyltransferase compare
BWI76_RS00805 -7.5 -5.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00850 -7.4 -10.2 acetylglutamate kinase compare
BWI76_RS20350 -7.3 -8.2 amidophosphoribosyltransferase compare
BWI76_RS21475 -7.0 -6.8 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04255 -7.0 -4.8 threonine synthase compare
BWI76_RS04675 -6.9 -6.8 3-isopropylmalate dehydrogenase compare
BWI76_RS20895 -6.9 -4.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20965 -6.9 -6.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS05840 -6.9 -4.7 glutamate 5-kinase compare
BWI76_RS18940 -6.7 -6.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS21265 -6.6 -13.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04160 -6.6 -7.6 phosphoserine phosphatase compare
BWI76_RS11855 -6.5 -7.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04470 -6.5 -8.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS04250 -6.5 -7.7 homoserine kinase compare
BWI76_RS21465 -6.4 -6.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS01615 -6.4 -7.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18955 -6.4 -6.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18935 -6.3 -7.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18950 -6.3 -4.4 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS05835 -6.2 -4.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS04245 -6.2 -11.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18930 -6.1 -6.3 histidinol-phosphate transaminase compare
BWI76_RS04670 -6.0 -9.2 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00980 -6.0 -9.2 PLP-dependent threonine dehydratase compare
BWI76_RS00990 -6.0 -8.3 ketol-acid reductoisomerase compare
BWI76_RS04665 -6.0 -18.3 3-isopropylmalate dehydratase small subunit compare
BWI76_RS09755 -6.0 -8.2 phosphoserine transaminase compare
BWI76_RS11850 -6.0 -9.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00855 -6.0 -7.1 argininosuccinate lyase compare
BWI76_RS23220 -5.9 -7.9 amino-acid N-acetyltransferase compare
BWI76_RS00835 -5.9 -12.1 phosphoenolpyruvate carboxylase compare
BWI76_RS23360 -5.8 -4.0 diaminopimelate decarboxylase compare
BWI76_RS00785 -5.6 -5.5 cystathionine gamma-synthase compare
BWI76_RS18920 -5.6 -5.4 ATP phosphoribosyltransferase compare
BWI76_RS04645 -5.6 -7.6 3-dehydroquinase compare
BWI76_RS26460 -5.5 -6.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26085 -5.5 -3.7 3-dehydroquinate synthase compare
BWI76_RS24285 -5.4 -8.2 cystathionine beta-lyase compare
BWI76_RS22765 -5.3 -14.0 sulfite reductase subunit alpha compare
BWI76_RS04685 -5.3 -11.3 putative leucine operon leader peptide compare
BWI76_RS09760 -5.2 -7.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS22755 -5.1 -7.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS07070 -5.1 -5.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00985 -5.1 -7.0 transcriptional regulator IlvY compare
BWI76_RS09645 -5.1 -2.2 thioredoxin-disulfide reductase compare
BWI76_RS08385 -5.1 -4.9 citrate (Si)-synthase compare
BWI76_RS05015 -5.1 -4.2 transcriptional regulator compare
BWI76_RS04680 -5.0 -14.0 2-isopropylmalate synthase compare
BWI76_RS20355 -5.0 -4.3 colicin V production protein compare
BWI76_RS01610 -5.0 -6.2 phosphoribosylamine--glycine ligase compare
BWI76_RS11860 -4.9 -11.0 anthranilate synthase component I compare
BWI76_RS04465 -4.7 -4.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS07065 -4.6 -9.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00845 -4.6 -9.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11845 -4.6 -2.0 tryptophan synthase subunit beta compare
BWI76_RS23920 -4.4 -4.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS01295 -4.4 -6.8 Uridine phosphorylase (EC 2.4.2.3) (from data) conserved
BWI76_RS18925 -4.4 -5.9 histidinol dehydrogenase compare
BWI76_RS00975 -4.4 -9.4 dihydroxy-acid dehydratase compare
BWI76_RS22760 -4.3 -9.0 sulfite reductase subunit beta compare
BWI76_RS11840 -4.3 -6.5 tryptophan synthase subunit alpha compare
BWI76_RS06185 -4.1 -7.6 shikimate kinase II compare
BWI76_RS23365 -3.9 -8.3 LysR family transcriptional regulator compare
BWI76_RS25115 -3.9 -8.9 argininosuccinate synthase compare
BWI76_RS03010 -3.9 -5.2 ornithine carbamoyltransferase compare
BWI76_RS20435 -3.8 -2.3 chorismate synthase compare
BWI76_RS01210 -3.7 -2.9 tyrosine recombinase XerC compare
BWI76_RS25960 -3.6 -6.0 NUDIX hydrolase compare
BWI76_RS23240 -3.5 -3.4 exonuclease V subunit gamma compare
BWI76_RS26455 -3.5 -4.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS00400 -3.4 -2.3 glutamine synthetase compare
BWI76_RS00965 -3.2 -2.0 acetolactate synthase 2 small subunit compare
BWI76_RS04240 -3.2 -3.6 thr operon leader peptide compare
BWI76_RS04270 -3.2 -6.4 transaldolase compare
BWI76_RS01185 -3.2 -2.2 adenylate cyclase compare
BWI76_RS22690 -3.1 -5.1 adenylyl-sulfate kinase compare
BWI76_RS02735 -3.1 -6.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS04705 -3.0 -8.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS23230 -2.9 -3.4 exodeoxyribonuclease V subunit beta compare
BWI76_RS22805 -2.9 -7.6 GTP diphosphokinase compare
BWI76_RS19610 -2.8 -5.2 Cytidine deaminase (EC 3.5.4.5) (from data) conserved
BWI76_RS09660 -2.8 -3.1 DNA translocase FtsK compare
BWI76_RS05200 -2.6 -3.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS24900 -2.5 -2.9 DeoR family transcriptional regulator compare
BWI76_RS05120 -2.4 -7.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS01200 -2.4 -2.8 diaminopimelate epimerase compare
BWI76_RS17720 -2.4 -2.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS25645 -2.2 -8.5 shikimate dehydrogenase compare
BWI76_RS00345 -2.2 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS20640 -2.2 -3.9 cysteine synthase A compare
BWI76_RS04140 -2.1 -3.5 phosphopentomutase compare
BWI76_RS15825 -2.1 -2.3 hypothetical protein compare
BWI76_RS26055 -2.0 -6.8 siroheme synthase compare
BWI76_RS20440 -1.9 -2.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS21370 -1.9 -2.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS02410 -1.9 -2.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS08405 -1.9 -4.1 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS26570 -1.9 -2.9 anion permease compare
BWI76_RS13240 -1.7 -2.1 hypothetical protein compare
BWI76_RS25600 -1.6 -1.4 tRNA-Thr compare
BWI76_RS16315 -1.6 -2.2 SirA-like protein compare
BWI76_RS00355 -1.6 -2.4 DNA polymerase I compare
BWI76_RS21140 -1.6 -2.3 molecular chaperone HscA compare
BWI76_RS12420 -1.6 -1.6 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS18385 -1.5 -1.8 hypothetical protein compare
BWI76_RS04530 -1.5 -2.8 peptidylprolyl isomerase SurA compare
BWI76_RS27440 -1.5 -3.7 DNA helicase RecG compare
BWI76_RS04130 -1.5 -2.6 2-deoxyribose-5-phosphate aldolase compare
BWI76_RS27430 -1.5 -1.8 (p)ppGpp synthetase compare
BWI76_RS20650 -1.5 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS14835 -1.4 -2.0 hypothetical protein compare
BWI76_RS08210 -1.4 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS08530 -1.4 -2.4 protein TolA compare
BWI76_RS20540 -1.3 -5.1 NupC/NupG family nucleoside CNT transporter compare
BWI76_RS16275 -1.3 -1.2 fumarate hydratase FumA compare
BWI76_RS19840 -1.3 -1.5 hypothetical protein compare
BWI76_RS01385 -1.3 -2.6 potassium transporter compare
BWI76_RS19690 -1.2 -2.8 LysR family transcriptional regulator compare
BWI76_RS03415 -1.2 -5.4 LacI family transcriptional regulator compare
BWI76_RS08520 -1.2 -1.5 colicin transporter TolQ compare
BWI76_RS02985 -1.2 -3.3 reactive intermediate/imine deaminase compare
BWI76_RS15955 -1.2 -8.4 transcriptional regulator compare
BWI76_RS04135 -1.2 -2.5 thymidine phosphorylase compare
BWI76_RS20270 -1.2 -4.7 hypothetical protein compare
BWI76_RS00960 -1.2 -4.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS20970 -1.2 -1.6 phosphoribosylglycinamide formyltransferase compare
BWI76_RS22240 -1.2 -3.4 transcriptional regulator compare
BWI76_RS27075 -1.2 -4.7 IclR family transcriptional regulator compare
BWI76_RS15830 -1.2 -2.2 hypothetical protein compare
BWI76_RS12090 -1.2 -1.3 HNH endonuclease compare
BWI76_RS15810 -1.2 -4.7 hypothetical protein compare
BWI76_RS21115 -1.2 -3.4 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS19240 -1.2 -1.8 ABC transporter substrate-binding protein compare
BWI76_RS24850 -1.1 -4.1 DeoR family transcriptional regulator compare
BWI76_RS15650 -1.1 -5.4 gp5 compare
BWI76_RS09730 -1.1 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS17195 -1.1 -2.5 hypothetical protein compare
BWI76_RS05260 -1.1 -1.6 chaperone compare
BWI76_RS23885 -1.1 -1.7 2-octaprenylphenol hydroxylase compare
BWI76_RS04515 -1.1 -1.6 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS01800 -1.1 -2.9 glucose-6-phosphate isomerase compare
BWI76_RS05680 -1.1 -2.2 LacI family transcriptional regulator compare
BWI76_RS09520 -1.1 -2.5 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS20730 -1.1 -1.7 hypothetical protein compare
BWI76_RS24605 -1.1 -5.5 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS21450 -1.0 -2.3 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS09970 -1.0 -2.4 porin OmpA compare
BWI76_RS15290 -1.0 -1.2 transcriptional regulator compare
BWI76_RS18565 -1.0 -2.9 pemk protein compare
BWI76_RS07725 -1.0 -1.3 iron-enterobactin transporter permease compare
BWI76_RS25320 -1.0 -3.4 glutamate synthase compare
BWI76_RS09190 -1.0 -3.1 hypothetical protein compare
BWI76_RS18165 -1.0 -1.4 NUDIX pyrophosphatase compare
BWI76_RS06295 -1.0 -3.0 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS26390 -1.0 -2.0 cell division protein FtsX compare
BWI76_RS10950 -1.0 -2.5 MFS transporter compare
BWI76_RS16360 -0.9 -1.4 electron transport complex subunit RsxB compare
BWI76_RS15840 -0.9 -2.0 prophage protein compare
BWI76_RS03225 -0.9 -5.1 transcriptional regulator compare
BWI76_RS22695 -0.9 -3.6 sulfate adenylyltransferase compare
BWI76_RS25335 -0.9 -1.4 stringent starvation protein A compare
BWI76_RS18605 -0.9 -1.8 oxidoreductase molybdopterin-binding protein compare
BWI76_RS11235 -0.9 -1.2 hypothetical protein compare
BWI76_RS09650 -0.9 -5.6 hypothetical protein compare
BWI76_RS00710 -0.9 -1.7 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS02610 -0.9 -3.2 transcriptional regulator compare
BWI76_RS04845 -0.9 -2.9 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS19035 -0.9 -3.3 dTDP-rhamnosyl transferase compare
BWI76_RS26000 -0.9 -3.5 aspartate aminotransferase family protein compare
BWI76_RS15680 -0.9 -3.4 hypothetical protein compare
BWI76_RS09655 -0.9 -4.2 leucine-responsive regulatory protein compare
BWI76_RS17070 -0.9 -3.3 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS23915 -0.9 -1.5 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS27170 -0.9 -3.3 MltR family transcriptional regulator compare
BWI76_RS15835 -0.9 -0.6 hypothetical protein compare
BWI76_RS06200 -0.9 -1.8 hypothetical protein compare
BWI76_RS27815 -0.9 -6.5 acetolactate synthase catalytic subunit compare
BWI76_RS20930 -0.8 -1.6 arsenate reductase (glutaredoxin) compare
BWI76_RS11600 -0.8 -3.0 selenide, water dikinase SelD compare
BWI76_RS22420 -0.8 -1.9 LacI family transcriptional regulator compare
BWI76_RS12460 -0.8 -2.6 envelope stress response membrane protein PspC compare
BWI76_RS11980 -0.8 -1.3 DeoR family transcriptional regulator compare
BWI76_RS27475 -0.8 -4.1 regulatory protein GntR family protein compare
BWI76_RS12280 -0.8 -2.9 hypothetical protein compare
BWI76_RS21690 -0.8 -1.9 hypothetical protein compare
BWI76_RS25315 -0.8 -5.7 glutamate synthase large subunit compare
BWI76_RS07675 -0.8 -3.2 DeoR family transcriptional regulator compare
BWI76_RS01890 -0.8 -2.0 transcriptional regulator Zur compare
BWI76_RS01095 -0.8 -1.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS23020 -0.8 -1.7 cobalamin biosynthesis protein CbiQ compare
BWI76_RS06340 -0.8 -1.0 hypothetical protein compare
BWI76_RS00390 -0.8 -2.0 two-component system sensor histidine kinase NtrB compare
BWI76_RS23480 -0.8 -5.3 EAL domain-containing protein compare
BWI76_RS19330 -0.8 -1.0 HAD family hydrolase compare
BWI76_RS08720 -0.8 -1.3 imidazolonepropionase compare
BWI76_RS15705 -0.8 -4.1 putative holin protein compare
BWI76_RS18745 -0.8 -1.4 adenosylhomocysteinase compare
BWI76_RS08580 -0.8 -2.0 quinolinate synthetase compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source Cytidine in Klebsiella michiganensis M5al

For carbon source Cytidine across organisms